RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 EMC10Q5UCC4 262 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 DAB2IPQ5VWQ8 1189 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 ARMCX6Q7L4S7 300 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 HS2ST1Q7LGA3 356 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 BRAPQ7Z569 592 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 FILIP1Q7Z7B0 1213 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 TOP6BLQ8N6T0 577 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 LRRC52Q8N7C0 313 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 FRMD1Q8N878 549 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 RDH13Q8NBN7 331 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 OR5B17Q8NGF7 314 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 CXorf38Q8TB03 319 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 USP33Q8TEY7 942 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 PIGKQ92643 395 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 MYLPFQ96A32 169 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 HPDLQ96IR7 371 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 ANKRD36BP1Q96IX9 119 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 RNF38Q9H0F5 515 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 ABCB6Q9NP58 842 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 GDAP2Q9NXN4 497 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 EBF1Q9UH73 591 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 PCDHB13Q9Y5F0 798 aa12.79□□□□□ -0.36
TRAFD1-205ENST00000548277 LNP1A1A4G5 178 aa12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 GABRDO14764 452 aa12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 KHNYNO15037 678 aaKnown RBP12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 MAP3K13O43283 966 aa12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 NFATC1O95644 943 aa12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 TNNC2P02585 160 aa12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 GARTP22102 1010 aa12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 ANXA13P27216 316 aa12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 ZNF252P-AS1Q0IIN9 211 aa12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 MYO1EQ12965 1108 aa12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 CFAP221Q4G0U5 840 aa12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 FAM171BQ6P995 826 aa12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 TMEM92Q6UXU6 159 aa12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 C4orf50Q6ZRC1 276 aa12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 CYP2U1Q7Z449 544 aa12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 PGBD3Q8N328 593 aa12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 GPD1LQ8N335 351 aa12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 DEFB119Q8N690 84 aa12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 PDILTQ8N807 584 aa12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 GLIS3Q8NEA6 775 aa12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 HPS3Q969F9 1004 aa12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 ERLEC1Q96DZ1 483 aa12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 CRTAC1Q9NQ79 661 aa12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 TRPM5Q9NZQ8 1165 aa12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 SEL1LQ9UBV2 794 aa12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 STK17AQ9UEE5 414 aa12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 FBXO2Q9UK22 296 aaPredicted RBP12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 PTPRJQ12913 1337 aa12.78□□□□□ -0.36
TRAFD1-205ENST00000548277 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 KLF8O95600 359 aaPredicted RBP12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 CST3P01034 146 aaPredicted RBP12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 HNRNPLP14866 589 aaKnown RBP eCLIP12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 TXLNAP40222 546 aa12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 STAT6P42226 847 aa12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 SHC2P98077 582 aa12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 KDSRQ06136 332 aa12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 MESP2Q0VG99 397 aa12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 MDH1BQ5I0G3 518 aa12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 PMS2CLQ68D20 193 aa12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 CBWD2Q8IUF1 395 aa12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 TMEFF1Q8IYR6 380 aa12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 ADGRG2Q8IZP9 1017 aa12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 ALLCQ8N6M5 410 aa12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 TXNDC5Q8NBS9 432 aaKnown RBP12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 MDGA1Q8NFP4 955 aa12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 OR6B3Q8NGW1 331 aa12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 KBTBD7Q8WVZ9 684 aa12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 FUBP3Q96I24 572 aaKnown RBP eCLIP12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 MRPL45Q9BRJ2 306 aaKnown RBP12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 TMEM9BQ9NQ34 198 aa12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 INTS13Q9NVM9 706 aa12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 CDH9Q9ULB4 789 aa12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 ARHGAP26Q9UNA1 814 aa12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 SRPRBQ9Y5M8 271 aaKnown RBP12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 CPQQ9Y646 472 aa12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 CHD8Q9HCK8 2581 aa12.77□□□□□ -0.37
TRAFD1-205ENST00000548277 A0A087X0B3 334 aa12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 ZNF233A6NK53 670 aa12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 F8VP50 259 aa12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 SGK1O00141 431 aa12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 CLDN5O00501 218 aa12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 CDX4O14627 284 aaPredicted RBP12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 CYP17A1P05093 508 aa12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 PROS1P07225 676 aa12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 MAGEA11P43364 429 aa12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 MAPK8P45983 427 aa12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 CUL4AQ13619 759 aa12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 DHCR24Q15392 516 aa12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 CRY1Q16526 586 aa12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 DUOXA2Q1HG44 320 aa12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 GAB4Q2WGN9 574 aa12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 KIAA1211LQ6NV74 962 aa12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 DENND5BQ6ZUT9 1274 aa12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 C12orf40Q86WS4 652 aa12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 NAT16Q8N8M0 369 aa12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 DEFB124Q8NES8 71 aa12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 PCED1BQ96HM7 432 aa12.76□□□□□ -0.37
TRAFD1-205ENST00000548277 SNX25Q9H3E2 840 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms