RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 CSH1P0DML2 217 aa17.35■□□□□ 0.37
DDX55-212ENST00000544738 CSH2P0DML3 217 aa17.35■□□□□ 0.37
DDX55-212ENST00000544738 AFMP43652 599 aa17.35■□□□□ 0.37
DDX55-212ENST00000544738 CDR1P51861 262 aa17.35■□□□□ 0.37
DDX55-212ENST00000544738 SOWAHAQ2M3V2 549 aa17.35■□□□□ 0.37
DDX55-212ENST00000544738 LMBRD2Q68DH5 695 aaPredicted RBP17.35■□□□□ 0.37
DDX55-212ENST00000544738 FSTL4Q6MZW2 842 aa17.35■□□□□ 0.37
DDX55-212ENST00000544738 NELFCDQ8IXH7 590 aa17.35■□□□□ 0.37
DDX55-212ENST00000544738 ADGRF2Q8IZF7 708 aa17.35■□□□□ 0.37
DDX55-212ENST00000544738 XXYLT1Q8NBI6 393 aa17.35■□□□□ 0.37
DDX55-212ENST00000544738 RDH13Q8NBN7 331 aa17.35■□□□□ 0.37
DDX55-212ENST00000544738 OR5B17Q8NGF7 314 aa17.35■□□□□ 0.37
DDX55-212ENST00000544738 BPIFB1Q8TDL5 484 aa17.35■□□□□ 0.37
DDX55-212ENST00000544738 SCFD1Q8WVM8 642 aa17.35■□□□□ 0.37
DDX55-212ENST00000544738 FNBP1Q96RU3 617 aa17.35■□□□□ 0.37
DDX55-212ENST00000544738 PI4K2AQ9BTU6 479 aa17.35■□□□□ 0.37
DDX55-212ENST00000544738 MKNK1Q9BUB5 465 aa17.35■□□□□ 0.37
DDX55-212ENST00000544738 BLZF1Q9H2G9 400 aa17.35■□□□□ 0.37
DDX55-212ENST00000544738 IL21Q9HBE4 155 aa17.35■□□□□ 0.37
DDX55-212ENST00000544738 TMLHEQ9NVH6 421 aa17.35■□□□□ 0.37
DDX55-212ENST00000544738 THG1LQ9NWX6 298 aaKnown RBP17.35■□□□□ 0.37
DDX55-212ENST00000544738 RNF40O75150 1001 aa17.34■□□□□ 0.37
DDX55-212ENST00000544738 ZIC2O95409 532 aaPredicted RBP17.34■□□□□ 0.37
DDX55-212ENST00000544738 TNNI1P19237 187 aa17.34■□□□□ 0.37
DDX55-212ENST00000544738 PLCB2Q00722 1185 aa17.34■□□□□ 0.37
DDX55-212ENST00000544738 BMT2Q1RMZ1 405 aa17.34■□□□□ 0.37
DDX55-212ENST00000544738 CFAP221Q4G0U5 840 aa17.34■□□□□ 0.37
DDX55-212ENST00000544738 C19orf48Q6RUI8 117 aa17.34■□□□□ 0.37
DDX55-212ENST00000544738 LIMS2Q7Z4I7 341 aa17.34■□□□□ 0.37
DDX55-212ENST00000544738 FUBP3Q96I24 572 aaKnown RBP eCLIP17.34■□□□□ 0.37
DDX55-212ENST00000544738 FAM84AQ96KN4 292 aa17.34■□□□□ 0.37
DDX55-212ENST00000544738 SLC39A2Q9NP94 309 aa17.34■□□□□ 0.37
DDX55-212ENST00000544738 GKN1Q9NS71 199 aa17.34■□□□□ 0.37
DDX55-212ENST00000544738 UXTQ9UBK9 157 aaPredicted RBP17.34■□□□□ 0.37
DDX55-212ENST00000544738 USP25Q9UHP3 1055 aa17.34■□□□□ 0.37
DDX55-212ENST00000544738 GTF3C4Q9UKN8 822 aa17.34■□□□□ 0.37
DDX55-212ENST00000544738 SMG1Q96Q15 3661 aaKnown RBP17.33■□□□□ 0.37
DDX55-212ENST00000544738 PTPRJQ12913 1337 aa17.33■□□□□ 0.36
DDX55-212ENST00000544738 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.33■□□□□ 0.36
DDX55-212ENST00000544738 CDX4O14627 284 aaPredicted RBP17.33■□□□□ 0.36
DDX55-212ENST00000544738 CLIC2O15247 247 aa17.33■□□□□ 0.36
DDX55-212ENST00000544738 EGFP01133 1207 aa17.33■□□□□ 0.36
DDX55-212ENST00000544738 DLATP10515 647 aaKnown RBP17.33■□□□□ 0.36
DDX55-212ENST00000544738 HMGA1P17096 107 aaKnown RBP17.33■□□□□ 0.36
DDX55-212ENST00000544738 ACAT1P24752 427 aaKnown RBP17.33■□□□□ 0.36
DDX55-212ENST00000544738 DDX6P26196 483 aaKnown RBP eCLIP17.33■□□□□ 0.36
DDX55-212ENST00000544738 CASP1P29466 404 aa17.33■□□□□ 0.36
DDX55-212ENST00000544738 CYP2J2P51589 502 aa17.33■□□□□ 0.36
DDX55-212ENST00000544738 CYP4F8P98187 520 aa17.33■□□□□ 0.36
DDX55-212ENST00000544738 CYP24A1Q07973 514 aa17.33■□□□□ 0.36
DDX55-212ENST00000544738 PSMD2Q13200 908 aa17.33■□□□□ 0.36
DDX55-212ENST00000544738 CUL4BQ13620 913 aa17.33■□□□□ 0.36
DDX55-212ENST00000544738 PSMD6Q15008 389 aa17.33■□□□□ 0.36
DDX55-212ENST00000544738 MAPRE1Q15691 268 aaKnown RBP17.33■□□□□ 0.36
DDX55-212ENST00000544738 KNOP1Q1ED39 458 aaKnown RBP17.33■□□□□ 0.36
DDX55-212ENST00000544738 TMEM196Q5HYL7 178 aa17.33■□□□□ 0.36
DDX55-212ENST00000544738 SCARA3Q6AZY7 606 aa17.33■□□□□ 0.36
DDX55-212ENST00000544738 TRAPPC11Q7Z392 1133 aa17.33■□□□□ 0.36
DDX55-212ENST00000544738 SPATA2LQ8IUW3 424 aaPredicted RBP17.33■□□□□ 0.36
DDX55-212ENST00000544738 C12orf56Q8IXR9 622 aa17.33■□□□□ 0.36
DDX55-212ENST00000544738 CMTM8Q8IZV2 173 aa17.33■□□□□ 0.36
DDX55-212ENST00000544738 GOLGA5Q8TBA6 731 aa17.33■□□□□ 0.36
DDX55-212ENST00000544738 PKMYT1Q99640 499 aa17.33■□□□□ 0.36
DDX55-212ENST00000544738 SERTAD1Q9UHV2 236 aa17.33■□□□□ 0.36
DDX55-212ENST00000544738 KLK13Q9UKR3 277 aa17.33■□□□□ 0.36
DDX55-212ENST00000544738 NEUROG3Q9Y4Z2 214 aa17.33■□□□□ 0.36
DDX55-212ENST00000544738 PATE3B3GLJ2 98 aa17.32■□□□□ 0.36
DDX55-212ENST00000544738 PRAMEF12O95522 483 aa17.32■□□□□ 0.36
DDX55-212ENST00000544738 F11P03951 625 aa17.32■□□□□ 0.36
DDX55-212ENST00000544738 MYL1P05976 194 aa17.32■□□□□ 0.36
DDX55-212ENST00000544738 FAM163BP0C2L3 166 aa17.32■□□□□ 0.36
DDX55-212ENST00000544738 CMA1P23946 247 aa17.32■□□□□ 0.36
DDX55-212ENST00000544738 CYP2F1P24903 491 aa17.32■□□□□ 0.36
DDX55-212ENST00000544738 AVPR1AP37288 418 aa17.32■□□□□ 0.36
DDX55-212ENST00000544738 NLRP12P59046 1061 aa17.32■□□□□ 0.36
DDX55-212ENST00000544738 KRT85P78386 507 aa17.32■□□□□ 0.36
DDX55-212ENST00000544738 IRX4P78413 519 aa17.32■□□□□ 0.36
DDX55-212ENST00000544738 C4orf50Q6ZRC1 276 aa17.32■□□□□ 0.36
DDX55-212ENST00000544738 OSTM1Q86WC4 334 aa17.32■□□□□ 0.36
DDX55-212ENST00000544738 MRPS31Q92665 395 aaKnown RBP17.32■□□□□ 0.36
DDX55-212ENST00000544738 SPATA32Q96LK8 384 aa17.32■□□□□ 0.36
DDX55-212ENST00000544738 MMS19Q96T76 1030 aa17.32■□□□□ 0.36
DDX55-212ENST00000544738 CGRRF1Q99675 332 aa17.32■□□□□ 0.36
DDX55-212ENST00000544738 SLC46A2Q9BY10 475 aa17.32■□□□□ 0.36
DDX55-212ENST00000544738 SMG9Q9H0W8 520 aaKnown RBP17.32■□□□□ 0.36
DDX55-212ENST00000544738 CDH9Q9ULB4 789 aa17.32■□□□□ 0.36
DDX55-212ENST00000544738 MAGED2Q9UNF1 606 aaPredicted RBP17.32■□□□□ 0.36
DDX55-212ENST00000544738 MSRB2Q9Y3D2 182 aa17.32■□□□□ 0.36
DDX55-212ENST00000544738 CACNA1EQ15878 2313 aa17.32■□□□□ 0.36
DDX55-212ENST00000544738 ABCA7Q8IZY2 2146 aa17.32■□□□□ 0.36
DDX55-212ENST00000544738 TRDMT1O14717 391 aaKnown RBP17.31■□□□□ 0.36
DDX55-212ENST00000544738 ACTN4O43707 911 aaKnown RBP17.31■□□□□ 0.36
DDX55-212ENST00000544738 EXOC3O60645 756 aa17.31■□□□□ 0.36
DDX55-212ENST00000544738 MAGEA11P43364 429 aa17.31■□□□□ 0.36
DDX55-212ENST00000544738 DGKEP52429 567 aa17.31■□□□□ 0.36
DDX55-212ENST00000544738 DDR2Q16832 855 aa17.31■□□□□ 0.36
DDX55-212ENST00000544738 SOWAHCQ53LP3 525 aaPredicted RBP17.31■□□□□ 0.36
DDX55-212ENST00000544738 FAM171BQ6P995 826 aa17.31■□□□□ 0.36
DDX55-212ENST00000544738 TMEM150AQ86TG1 271 aa17.31■□□□□ 0.36
DDX55-212ENST00000544738 KBTBD7Q8WVZ9 684 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms