RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 EFCAB1Q9HAE3 211 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 PCNAP12004 261 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 BGNP21810 368 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 NT5C2P49902 561 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 KBTBD12Q3ZCT8 623 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 TMEM8AQ9HCN3 771 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 TMCC3Q9ULS5 477 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 PCDHB2Q9Y5E7 798 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 GLRA3O75311 464 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 SNX17Q15036 470 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 ALX1Q15699 326 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 PDPK2PQ6A1A2 396 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 ISLR2Q6UXK2 745 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 ST13P5Q8NFI4 369 aaPredicted RBP15.98■□□□□ 0.15
CHD4-210ENST00000544040 CYLDQ9NQC7 956 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 DCDC2Q9UHG0 476 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 SYNMO15061 1565 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 C1orf232A0A0U1RR37 186 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 ASB14A6NK59 587 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 CFAP99D6REC4 459 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 H2AFYO75367 372 aaKnown RBP15.98■□□□□ 0.15
CHD4-210ENST00000544040 AKIRIN2Q53H80 203 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 XKR3Q5GH77 459 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 C11orf63Q6NUN7 778 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 UNC45BQ8IWX7 931 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 B3GALNT2Q8NCR0 500 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 NOL6Q9H6R4 1146 aaKnown RBP15.98■□□□□ 0.15
CHD4-210ENST00000544040 RMND5AQ9H871 391 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 ELP3Q9H9T3 547 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 KRCC1Q9NPI7 259 aaPredicted RBP15.98■□□□□ 0.15
CHD4-210ENST00000544040 UBAP1Q9NZ09 502 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 TMA7Q9Y2S6 64 aaKnown RBP15.98■□□□□ 0.15
CHD4-210ENST00000544040 TK2O00142 265 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 FAM20BO75063 409 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 MT-CO1P00395 513 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 EPHB2P29323 1055 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 RGS2P41220 211 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 TRAPPC11Q7Z392 1133 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 DDX18Q9NVP1 670 aaKnown RBP15.98■□□□□ 0.15
CHD4-210ENST00000544040 CTNNAL1Q9UBT7 734 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 METP08581 1390 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 CLASP1Q7Z460 1538 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 OR1G1P47890 313 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 PRKCEQ02156 737 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 KRR1Q13601 381 aaKnown RBP15.98■□□□□ 0.15
CHD4-210ENST00000544040 ATG16L2Q8NAA4 619 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 C19orf60Q96EN9 201 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 KCTD14Q9BQ13 255 aaPredicted RBP15.98■□□□□ 0.15
CHD4-210ENST00000544040 PDS5AQ29RF7 1337 aaKnown RBP15.98■□□□□ 0.15
CHD4-210ENST00000544040 DYNC1LI2O43237 492 aaPredicted RBP15.98■□□□□ 0.15
CHD4-210ENST00000544040 SGPL1O95470 568 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 HARS2P49590 506 aaKnown RBP15.98■□□□□ 0.15
CHD4-210ENST00000544040 KCTD21Q4G0X4 260 aa15.98■□□□□ 0.15
CHD4-210ENST00000544040 SLC13A5Q86YT5 568 aaPredicted RBP15.98■□□□□ 0.15
CHD4-210ENST00000544040 TDRD5Q8NAT2 981 aaKnown RBP15.98■□□□□ 0.15
CHD4-210ENST00000544040 A0A1W2PQJ5 194 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 KIAA0391O15091 583 aaKnown RBP15.97■□□□□ 0.15
CHD4-210ENST00000544040 NDUFB5O43674 189 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 C4BPBP20851 252 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 RASA2Q15283 850 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 ATP6AP1LQ52LC2 224 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 LPCAT2Q7L5N7 544 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 STKLD1Q8NE28 680 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 FOXP3Q9BZS1 431 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 CYP39A1Q9NYL5 469 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 PEX1O43933 1283 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 ENDOD1O94919 500 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 PSMA3P25788 255 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 TPP2P29144 1249 aaPredicted RBP15.97■□□□□ 0.15
CHD4-210ENST00000544040 SERPINB8P50452 374 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 PRKCQQ04759 706 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 DDI2Q5TDH0 399 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 DCUN1D5Q9BTE7 237 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 SERHL2Q9H4I8 314 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 SERHLQ9NQF3 203 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 MRGBPQ9NV56 204 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 M0QYT0 321 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 STX7O15400 261 aaKnown RBP15.97■□□□□ 0.15
CHD4-210ENST00000544040 NPTXRO95502 500 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 ITGB3P05106 788 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 ITGA4P13612 1032 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 NCKAP1LP55160 1127 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 SV2CQ496J9 727 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 NEDD1Q8NHV4 660 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 TRPC4APQ8TEL6 797 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 UBASH3BQ8TF42 649 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 SEPHS2Q99611 448 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 TIPINQ9BVW5 301 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 TAGLN3Q9UI15 199 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 C2CD2LO14523 706 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 ACADSBP45954 432 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 SEMA3FQ13275 785 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 TCHHL1Q5QJ38 904 aaPredicted RBP15.97■□□□□ 0.15
CHD4-210ENST00000544040 ARMC4Q5T2S8 1044 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 MAGEB10Q96LZ2 347 aaPredicted RBP15.97■□□□□ 0.15
CHD4-210ENST00000544040 MKNK1Q9BUB5 465 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 GPATCH2LQ9NWQ4 482 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 SPTLC1O15269 473 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 ATP6V1G2O95670 118 aa15.97■□□□□ 0.15
CHD4-210ENST00000544040 UGT3A1Q6NUS8 523 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms