RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 PAN2Q504Q3 1202 aaKnown RBP8.37□□□□□ -1.07
TRIM59-208ENST00000543469 RABGAP1LQ5R372 815 aa8.37□□□□□ -1.07
TRIM59-208ENST00000543469 LGSNQ5TDP6 509 aa8.37□□□□□ -1.07
TRIM59-208ENST00000543469 WSCD1Q658N2 575 aa8.37□□□□□ -1.07
TRIM59-208ENST00000543469 GJB7Q6PEY0 223 aa8.37□□□□□ -1.07
TRIM59-208ENST00000543469 LZTR1Q8N653 840 aa8.37□□□□□ -1.07
TRIM59-208ENST00000543469 KRT35Q92764 455 aa8.37□□□□□ -1.07
TRIM59-208ENST00000543469 P3H4Q92791 437 aa8.37□□□□□ -1.07
TRIM59-208ENST00000543469 SMYD3Q9H7B4 428 aa8.37□□□□□ -1.07
TRIM59-208ENST00000543469 ABI2Q9NYB9 513 aaPredicted RBP8.37□□□□□ -1.07
TRIM59-208ENST00000543469 TJP2Q9UDY2 1190 aa8.37□□□□□ -1.07
TRIM59-208ENST00000543469 A0A087X0T9 212 aa8.37□□□□□ -1.07
TRIM59-208ENST00000543469 GOLGA8CPA6NN73 597 aa8.37□□□□□ -1.07
TRIM59-208ENST00000543469 C9IYK1 514 aa8.37□□□□□ -1.07
TRIM59-208ENST00000543469 SLC9A3R1O14745 358 aaPredicted RBP8.37□□□□□ -1.07
TRIM59-208ENST00000543469 APOL1O14791 398 aa8.37□□□□□ -1.07
TRIM59-208ENST00000543469 MTA2O94776 668 aa8.37□□□□□ -1.07
TRIM59-208ENST00000543469 FAM228BP0C875 321 aa8.37□□□□□ -1.07
TRIM59-208ENST00000543469 CDC25CP30307 473 aa8.37□□□□□ -1.07
TRIM59-208ENST00000543469 NOS2P35228 1153 aa8.37□□□□□ -1.07
TRIM59-208ENST00000543469 NDUFV1P49821 464 aa8.37□□□□□ -1.07
TRIM59-208ENST00000543469 IFRD2Q12894 506 aaPredicted RBP8.37□□□□□ -1.07
TRIM59-208ENST00000543469 CC2D1AQ6P1N0 951 aaPredicted RBP8.37□□□□□ -1.07
TRIM59-208ENST00000543469 LRRC49Q8IUZ0 686 aa8.37□□□□□ -1.07
TRIM59-208ENST00000543469 MYRIPQ8NFW9 859 aa8.37□□□□□ -1.07
TRIM59-208ENST00000543469 EXD1Q8NHP7 514 aa8.37□□□□□ -1.07
TRIM59-208ENST00000543469 CPA5Q8WXQ8 436 aa8.37□□□□□ -1.07
TRIM59-208ENST00000543469 OVCA2Q8WZ82 227 aa8.37□□□□□ -1.07
TRIM59-208ENST00000543469 HERC2P3Q9BVR0 1158 aa8.37□□□□□ -1.07
TRIM59-208ENST00000543469 SNX12Q9UMY4 172 aa8.37□□□□□ -1.07
TRIM59-208ENST00000543469 GRIN2DO15399 1336 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 H7C0C1 242 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 PFKLP17858 780 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 DDX6P26196 483 aaKnown RBP eCLIP8.36□□□□□ -1.071e-8■■■□□ 19.1
TRIM59-208ENST00000543469 GTF2F1P35269 517 aaKnown RBP eCLIP8.36□□□□□ -1.07
TRIM59-208ENST00000543469 ATP5OP48047 213 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 ITIH3Q06033 890 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 DSC3Q14574 896 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 TCEAL1Q15170 157 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 PPM1LQ5SGD2 360 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 E4F1Q66K89 784 aaPredicted RBP8.36□□□□□ -1.07
TRIM59-208ENST00000543469 IRF2BP2Q7Z5L9 587 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 NOP9Q86U38 636 aaKnown RBP8.36□□□□□ -1.07
TRIM59-208ENST00000543469 SLC47A2Q86VL8 602 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 MAGOHBQ96A72 148 aaKnown RBP8.36□□□□□ -1.07
TRIM59-208ENST00000543469 MCOLN1Q9GZU1 580 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 RETREG1Q9H6L5 497 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.36□□□□□ -1.07
TRIM59-208ENST00000543469 STXBP5LQ9Y2K9 1186 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 A6NNZ2 444 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 NCK2O43639 380 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 CDK7P50613 346 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 GEMIN4P57678 1058 aaKnown RBP8.36□□□□□ -1.07
TRIM59-208ENST00000543469 SFSWAPQ12872 951 aaKnown RBP8.36□□□□□ -1.07
TRIM59-208ENST00000543469 PDCLQ13371 301 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 TUBB8Q3ZCM7 444 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 LHX8Q68G74 356 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 SPOPLQ6IQ16 392 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 POLNQ7Z5Q5 900 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 RNPC3Q96LT9 517 aaKnown RBP8.36□□□□□ -1.07
TRIM59-208ENST00000543469 PPP1R10Q96QC0 940 aaKnown RBP8.36□□□□□ -1.07
TRIM59-208ENST00000543469 OSBPL9Q96SU4 736 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 RAD9AQ99638 391 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 POPDC2Q9HBU9 364 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 TBC1D13Q9NVG8 400 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 HSFX1Q9UBD0 423 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 TUBGCP4Q9UGJ1 667 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 CCDC85CA6NKD9 419 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 CYP11A1P05108 521 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 TKTL1P51854 596 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 YWHAZP63104 245 aaKnown RBP8.36□□□□□ -1.07
TRIM59-208ENST00000543469 NOMO3P69849 1222 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 NR1H3Q13133 447 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 DNAJC21Q5F1R6 531 aaKnown RBP8.36□□□□□ -1.07
TRIM59-208ENST00000543469 NUGGCQ68CJ6 796 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 CRELD2Q6UXH1 353 aaPredicted RBP8.36□□□□□ -1.07
TRIM59-208ENST00000543469 APTXQ7Z2E3 356 aaKnown RBP8.36□□□□□ -1.07
TRIM59-208ENST00000543469 FAM35AQ86V20 835 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 YAF2Q8IY57 180 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 NUP93Q8N1F7 819 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 KCTD13Q8WZ19 329 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 MCEEQ96PE7 176 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 CARD6Q9BX69 1037 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 ZNF148Q9UQR1 794 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 BACE2Q9Y5Z0 518 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 DDX3XO00571 662 aaKnown RBP eCLIP8.36□□□□□ -1.07
TRIM59-208ENST00000543469 ATP8B1O43520 1251 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 LUC7L3O95232 432 aaKnown RBP8.36□□□□□ -1.07
TRIM59-208ENST00000543469 ZBED1O96006 694 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 KLRC2P26717 231 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 PCK1P35558 622 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 BRMS1LQ5PSV4 323 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 METTL3Q86U44 580 aaKnown RBP8.36□□□□□ -1.07
TRIM59-208ENST00000543469 PIK3R5Q8WYR1 880 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 LPPQ93052 612 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 R3HDMLQ9H3Y0 253 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 SIX2Q9NPC8 291 aa8.36□□□□□ -1.07
TRIM59-208ENST00000543469 METTL5Q9NRN9 209 aaKnown RBP8.36□□□□□ -1.07
TRIM59-208ENST00000543469 RCOR3Q9P2K3 495 aaPredicted RBP8.36□□□□□ -1.07
TRIM59-208ENST00000543469 AFF4Q9UHB7 1163 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms