RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 CROTQ9UKG9 612 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 CAPN11Q9UMQ6 739 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 TBC1D30Q9Y2I9 924 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 RRP7AQ9Y3A4 280 aaKnown RBP4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 ADCY10Q96PN6 1610 aa4.42□□□□□ -1.7
SFSWAP-211ENST00000542813 ABCA10Q8WWZ4 1543 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 FHAD1B1AJZ9 1412 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 C2orf78A6NCI8 922 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 H7C4K7 107 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 ABLIM1O14639 778 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 NRP1O14786 923 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 ANP32CO43423 234 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 TRIM13O60858 407 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 KRT38O76015 456 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 HAUS5O94927 633 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 NTSR2O95665 410 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 KNG1P01042 644 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 SLC3A2P08195 630 aaKnown RBP4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 XRCC6P12956 609 aaKnown RBP eCLIP4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 ALOX12P18054 663 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 SLC6A4P31645 630 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 MEOX1P50221 254 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 CCR9P51686 369 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 WNT3P56703 355 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 ARF3P61204 181 aaPredicted RBP4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 ARF1P84077 181 aaKnown RBP4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 ZBED6P86452 979 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 PTH1RQ03431 593 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 SSPNQ14714 243 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 ANKRD1Q15327 319 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 TARBP2Q15633 366 aaKnown RBP4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 BTBD16Q32M84 506 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 FAM47AQ5JRC9 791 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 MFSD14BQ5SR56 506 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 ERICH6BQ5W0A0 696 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 ATG16L1Q676U5 607 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 FCRL6Q6DN72 434 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 NFRKBQ6P4R8 1299 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 B4GALNT4Q76KP1 1039 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 ANKS1BQ7Z6G8 1248 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 STK32CQ86UX6 486 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 CHD1LQ86WJ1 897 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 RASGRP3Q8IV61 690 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 NRSN1Q8IZ57 195 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 DNERQ8NFT8 737 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 NLGN4YQ8NFZ3 816 aaPredicted RBP4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 CXorf38Q8TB03 319 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 NELL1Q92832 810 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 GCDHQ92947 438 aaPredicted RBP4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 CEP95Q96GE4 821 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 SIGLEC10Q96LC7 697 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 NDC1Q9BTX1 674 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 SPATA5L1Q9BVQ7 753 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 GHITMQ9H3K2 345 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 ELAC1Q9H777 363 aaKnown RBP4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 ACAD9Q9H845 621 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 CHODLQ9H9P2 273 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 NOD2Q9HC29 1040 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 ZBTB26Q9HCK0 441 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 PCDH18Q9HCL0 1135 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 G6PC2Q9NQR9 355 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 TBC1D29Q9UFV1 150 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 MBD1Q9UIS9 605 aaPredicted RBP4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 VPS28Q9UK41 221 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 SLC45A2Q9UMX9 530 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 DAPP1Q9UN19 280 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 AGAP1Q9UPQ3 857 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 CNPY2Q9Y2B0 182 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 RBM8AQ9Y5S9 174 aaKnown RBP4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 IRAK3Q9Y616 596 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 TEX14Q8IWB6 1497 aa4.41□□□□□ -1.7
SFSWAP-211ENST00000542813 PCF11O94913 1555 aaKnown RBP4.4□□□□□ -1.7
SFSWAP-211ENST00000542813 AQP7P3A6NL99 342 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 E7EVH7 732 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 TOR1BO14657 336 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 SPTLC2O15270 562 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 CYP7B1O75881 506 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 TOX4O94842 621 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 SASH1O94885 1247 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 ANXA6P08133 673 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 CNPP09543 421 aaKnown RBP4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 SRGAP2BP0DMP2 458 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 AKR1B1P15121 316 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 PI3P19957 117 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 FBLN1P23142 703 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 KLRK1P26718 216 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 SLC5A2P31639 672 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 AKT1P31749 480 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 CASRP41180 1078 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 MC3RP41968 323 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 ETV4P43268 484 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 PTDSS1P48651 473 aaKnown RBP4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 RNASE9P60153 205 aaKnown RBP4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 SRSF3P84103 164 aaKnown RBP4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 TOP3AQ13472 1001 aaPredicted RBP4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 CUL4AQ13619 759 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 KCNAB1Q14722 419 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 INSCQ1MX18 579 aa4.4□□□□□ -1.71
SFSWAP-211ENST00000542813 OLFML2BQ68BL8 750 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms