RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 TNFSF9P41273 254 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 NAMPTP43490 491 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 ZXDBP98169 803 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 TARDBPQ13148 414 aaKnown RBP eCLIP10.53□□□□□ -0.72
CHFR-220ENST00000541817 PTPRNQ16849 979 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 PREPLQ4J6C6 727 aaPredicted RBP10.53□□□□□ -0.72
CHFR-220ENST00000541817 SYCP2LQ5T4T6 812 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 Q6ZUG5 572 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 USP49Q70CQ1 688 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 NEK8Q86SG6 692 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 MCPH1Q8NEM0 835 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 BRF1Q92994 677 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 TCHPQ9BT92 498 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.53□□□□□ -0.72
CHFR-220ENST00000541817 TM6SF1Q9BZW5 370 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 ZDHHC5Q9C0B5 715 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 PTPRHQ9HD43 1115 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 ARHGEF4Q9NR80 690 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 KCNK4Q9NYG8 393 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 SUSD2Q9UGT4 822 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 SRPK3Q9UPE1 567 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 LIMCH1Q9UPQ0 1083 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 PTPN13Q12923 2485 aa10.53□□□□□ -0.72
CHFR-220ENST00000541817 TCHHQ07283 1943 aa10.52□□□□□ -0.72
CHFR-220ENST00000541817 TRAV19A0A0A6YYK7 116 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 A0A1B0GVT2 93 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 E9PAM4 449 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 K7ERI5 159 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 BRINP1O60477 761 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 KRT38O76015 456 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 CER1O95813 267 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 HOXB2P14652 356 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 PSMA5P28066 241 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 IL9RQ01113 521 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 RHDQ02161 417 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 RESTQ13127 1097 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 DDR2Q16832 855 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 EARS2Q5JPH6 523 aaKnown RBP10.52□□□□□ -0.73
CHFR-220ENST00000541817 RNF20Q5VTR2 975 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 PADI6Q6TGC4 694 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 DBX2Q6ZNG2 339 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 FILIP1Q7Z7B0 1213 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 MIB1Q86YT6 1006 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 NAT16Q8N8M0 369 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 SNIP1Q8TAD8 396 aaKnown RBP10.52□□□□□ -0.73
CHFR-220ENST00000541817 TTC9Q92623 222 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 FGF11Q92914 225 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 SENP8Q96LD8 212 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 ACOX2Q99424 681 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 PI4K2AQ9BTU6 479 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 OXCT2Q9BYC2 517 aaPredicted RBP10.52□□□□□ -0.73
CHFR-220ENST00000541817 ZCWPW1Q9H0M4 648 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 SH3GLB2Q9NR46 395 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 PDRG1Q9NUG6 133 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 TMLHEQ9NVH6 421 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 ANKMY1Q9P2S6 941 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 ZMYM5Q9UJ78 669 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 HCN2Q9UL51 889 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 ZDHHC9Q9Y397 364 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 RAD54BQ9Y620 910 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 CYP46A1Q9Y6A2 500 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 SLCO1B1Q9Y6L6 691 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 NID2Q14112 1375 aa10.52□□□□□ -0.73
CHFR-220ENST00000541817 ABLIM1O14639 778 aa10.51□□□□□ -0.73
CHFR-220ENST00000541817 TRIM24O15164 1050 aa10.51□□□□□ -0.73
CHFR-220ENST00000541817 ZNF883P0CG24 379 aa10.51□□□□□ -0.73
CHFR-220ENST00000541817 SPATA31C1P0DKV0 1188 aa10.51□□□□□ -0.73
CHFR-220ENST00000541817 CXCL8P10145 99 aa10.51□□□□□ -0.73
CHFR-220ENST00000541817 MYF5P13349 255 aa10.51□□□□□ -0.73
CHFR-220ENST00000541817 AARSP49588 968 aaKnown RBP eCLIP10.51□□□□□ -0.73
CHFR-220ENST00000541817 CSNK1EP49674 416 aaKnown RBP10.51□□□□□ -0.73
CHFR-220ENST00000541817 ZNF445P59923 1031 aa10.51□□□□□ -0.73
CHFR-220ENST00000541817 ATP2C1P98194 919 aaPredicted RBP10.51□□□□□ -0.73
CHFR-220ENST00000541817 NFATC3Q12968 1075 aa10.51□□□□□ -0.73
CHFR-220ENST00000541817 PKP1Q13835 747 aa10.51□□□□□ -0.73
CHFR-220ENST00000541817 DHCR24Q15392 516 aa10.51□□□□□ -0.73
CHFR-220ENST00000541817 WDR45BQ5MNZ6 344 aa10.51□□□□□ -0.73
CHFR-220ENST00000541817 PIK3AP1Q6ZUJ8 805 aa10.51□□□□□ -0.73
CHFR-220ENST00000541817 TAS1R3Q7RTX0 852 aa10.51□□□□□ -0.73
CHFR-220ENST00000541817 APBB1IPQ7Z5R6 666 aaPredicted RBP10.51□□□□□ -0.73
CHFR-220ENST00000541817 TMPRSS12Q86WS5 348 aa10.51□□□□□ -0.73
CHFR-220ENST00000541817 ZNF513Q8N8E2 541 aaPredicted RBP10.51□□□□□ -0.73
CHFR-220ENST00000541817 OXER1Q8TDS5 423 aa10.51□□□□□ -0.73
CHFR-220ENST00000541817 KCNB2Q92953 911 aa10.51□□□□□ -0.73
CHFR-220ENST00000541817 SYAP1Q96A49 352 aaPredicted RBP10.51□□□□□ -0.73
CHFR-220ENST00000541817 TMEM176AQ96HP8 235 aa10.51□□□□□ -0.73
CHFR-220ENST00000541817 LGMNQ99538 433 aa10.51□□□□□ -0.73
CHFR-220ENST00000541817 GPR174Q9BXC1 333 aa10.51□□□□□ -0.73
CHFR-220ENST00000541817 GJB4Q9NTQ9 266 aa10.51□□□□□ -0.73
CHFR-220ENST00000541817 GCNT4Q9P109 453 aa10.51□□□□□ -0.73
CHFR-220ENST00000541817 PCDHA12Q9UN75 941 aa10.51□□□□□ -0.73
CHFR-220ENST00000541817 SMC3Q9UQE7 1217 aa10.51□□□□□ -0.73
CHFR-220ENST00000541817 A0A1W2PQF6 199 aa10.5□□□□□ -0.73
CHFR-220ENST00000541817 TBC1D3BA6NDS4 549 aa10.5□□□□□ -0.73
CHFR-220ENST00000541817 CCDC169A6NNP5 214 aa10.5□□□□□ -0.73
CHFR-220ENST00000541817 LEFTY2O00292 366 aa10.5□□□□□ -0.73
CHFR-220ENST00000541817 MED24O75448 989 aa10.5□□□□□ -0.73
CHFR-220ENST00000541817 ODC1P11926 461 aa10.5□□□□□ -0.73
CHFR-220ENST00000541817 PDIA4P13667 645 aaKnown RBP10.5□□□□□ -0.73
CHFR-220ENST00000541817 IFNAR1P17181 557 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms