RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 ZKSCAN8Q15776 578 aaPredicted RBP13.9□□□□□ -0.18
PRKAB1-206ENST00000541640 FAM133BQ5BKY9 247 aaKnown RBP13.9□□□□□ -0.18
PRKAB1-206ENST00000541640 WDR78Q5VTH9 848 aa13.9□□□□□ -0.18
PRKAB1-206ENST00000541640 ANKRD22Q5VYY1 191 aa13.9□□□□□ -0.18
PRKAB1-206ENST00000541640 RGS9BPQ6ZS82 235 aa13.9□□□□□ -0.18
PRKAB1-206ENST00000541640 RFX6Q8HWS3 928 aa13.9□□□□□ -0.18
PRKAB1-206ENST00000541640 HPDLQ96IR7 371 aa13.9□□□□□ -0.18
PRKAB1-206ENST00000541640 SMC6Q96SB8 1091 aa13.9□□□□□ -0.18
PRKAB1-206ENST00000541640 RSAD1Q9HA92 442 aa13.9□□□□□ -0.18
PRKAB1-206ENST00000541640 PCSK1NQ9UHG2 260 aa13.9□□□□□ -0.18
PRKAB1-206ENST00000541640 RABGEF1Q9UJ41 708 aa13.9□□□□□ -0.18
PRKAB1-206ENST00000541640 CLUHO75153 1309 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 COL1A2P08123 1366 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 CHUKO15111 745 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 ARF4P18085 180 aaPredicted RBP13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 KRT15P19012 456 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 EPHX2P34913 555 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 GEMIN4P57678 1058 aaKnown RBP13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 ELF3P78545 371 aaPredicted RBP13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 TMEM132DQ14C87 1099 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 SNCBQ16143 134 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 FNBP1LQ5T0N5 605 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 RNF43Q68DV7 783 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 MOB2Q70IA6 237 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 ARMCX2Q7L311 632 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 UNC45BQ8IWX7 931 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 TTC39CQ8N584 583 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 CCDC63Q8NA47 563 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 ATP11CQ8NB49 1132 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 PYROXD1Q8WU10 500 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 CPB2Q96IY4 423 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 HEXIM2Q96MH2 286 aaKnown RBP13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 ADPGKQ9BRR6 497 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 C10orf88Q9H8K7 445 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 SSU72Q9NP77 194 aaKnown RBP13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 ITGA11Q9UKX5 1188 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 KIAA1257Q9ULG3 409 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 BARX2Q9UMQ3 279 aaPredicted RBP13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 GOLGA8MH3BSY2 632 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 SPAG7O75391 227 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 CSDE1O75534 798 aaKnown RBP13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 TSHRP16473 764 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 EIF3EP60228 445 aaKnown RBP13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 GAD2Q05329 585 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 BNIP1Q12981 228 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 SPARCL1Q14515 664 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 TAF5Q15542 800 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 ZC3H12AQ5D1E8 599 aaKnown RBP13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 FAM102AQ5T9C2 384 aaPredicted RBP13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 MAP1SQ66K74 1059 aaPredicted RBP13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 CAPN12Q6ZSI9 719 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 NT5DC4Q86YG4 428 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 ANKMY2Q8IV38 441 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 HSPH1Q92598 858 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 PITPNM3Q9BZ71 974 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 MIS12Q9H081 205 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 RXFP1Q9HBX9 757 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 AGAP1Q9UPQ3 857 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 C2CD2Q9Y426 696 aa13.89□□□□□ -0.19
PRKAB1-206ENST00000541640 MCF2LO15068 1137 aa13.88□□□□□ -0.19
PRKAB1-206ENST00000541640 BANF1O75531 89 aa13.88□□□□□ -0.19
PRKAB1-206ENST00000541640 GPD1P21695 349 aa13.88□□□□□ -0.19
PRKAB1-206ENST00000541640 NCALDP61601 193 aa13.88□□□□□ -0.19
PRKAB1-206ENST00000541640 MSS51Q4VC12 460 aa13.88□□□□□ -0.19
PRKAB1-206ENST00000541640 TAPT1Q6NXT6 567 aa13.88□□□□□ -0.19
PRKAB1-206ENST00000541640 LCLAT1Q6UWP7 414 aa13.88□□□□□ -0.19
PRKAB1-206ENST00000541640 MAGEC3Q8TD91 643 aa13.88□□□□□ -0.19
PRKAB1-206ENST00000541640 OPTNQ96CV9 577 aa13.88□□□□□ -0.19
PRKAB1-206ENST00000541640 CDCA5Q96FF9 252 aa13.88□□□□□ -0.19
PRKAB1-206ENST00000541640 PEBP4Q96S96 227 aa13.88□□□□□ -0.19
PRKAB1-206ENST00000541640 CNPY3Q9BT09 278 aa13.88□□□□□ -0.19
PRKAB1-206ENST00000541640 DHRS4Q9BTZ2 278 aa13.88□□□□□ -0.19
PRKAB1-206ENST00000541640 ACSS3Q9H6R3 686 aa13.88□□□□□ -0.19
PRKAB1-206ENST00000541640 KIF9Q9HAQ2 790 aa13.88□□□□□ -0.19
PRKAB1-206ENST00000541640 KLHL14Q9P2G3 628 aa13.88□□□□□ -0.19
PRKAB1-206ENST00000541640 AKT3Q9Y243 479 aa13.88□□□□□ -0.19
PRKAB1-206ENST00000541640 STARD13Q9Y3M8 1113 aa13.88□□□□□ -0.19
PRKAB1-206ENST00000541640 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 C2CD4BA6NLJ0 364 aa13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 TYROBPO43914 113 aa13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 GTF2A1P52655 376 aaPredicted RBP13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 NDST1P52848 882 aa13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 RBP5P82980 135 aa13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 PDK4Q16654 411 aa13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 ADGRD1Q6QNK2 874 aa13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 CYP4V2Q6ZWL3 525 aaPredicted RBP13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 USP50Q70EL3 339 aaPredicted RBP13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 PPTC7Q8NI37 304 aa13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 WDR83Q9BRX9 315 aaKnown RBP13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 DPP3Q9NY33 737 aa13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 TMEM63AO94886 807 aa13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 VTNP04004 478 aa13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 RBP3P10745 1247 aa13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 CYP3A5P20815 502 aa13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 SSTR1P30872 391 aa13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 STIP1P31948 543 aaKnown RBP13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 CCDC15Q0P6D6 951 aa13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 DPYSL3Q14195 570 aa13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 NOMO1Q15155 1222 aa13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 KLHL38Q2WGJ6 581 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms