RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 CCDC142Q17RM4 750 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 CFAP221Q4G0U5 840 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 MDH1BQ5I0G3 518 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 DAB2IPQ5VWQ8 1189 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 PMF1Q6P1K2 205 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 XYLT1Q86Y38 959 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 UBL4BQ8N7F7 174 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 SLC35F5Q8WV83 523 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 MCEEQ96PE7 176 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 HNRNPABQ99729 332 aaKnown RBP9.14□□□□□ -0.95
THBS3-210ENST00000541576 MRPL9Q9BYD2 267 aaKnown RBP9.14□□□□□ -0.95
THBS3-210ENST00000541576 CDH9Q9ULB4 789 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 TMEM191CA6NGB0 347 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 E5RJQ4 531 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 TMEM189-UBE2V1I3L0A0 370 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 TIMP1P01033 207 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 KRT3P12035 628 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 TKTP29401 623 aaKnown RBP9.14□□□□□ -0.95
THBS3-210ENST00000541576 PEX5P50542 639 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 CDR1P51861 262 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 PPP1R15BQ5SWA1 713 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 KIAA0319Q5VV43 1072 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 KIRREL3Q8IZU9 778 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 FUKQ8N0W3 1084 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.14□□□□□ -0.95
THBS3-210ENST00000541576 STK32AQ8WU08 396 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 RPGRIP1Q96KN7 1286 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 CRTAC1Q9NQ79 661 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 IP6K2Q9UHH9 426 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 SIGLEC16A6NMB1 481 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 TBKBP1A7MCY6 615 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 RAG1P15918 1043 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 TYMPP19971 482 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 SLC8A3P57103 927 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 SNX16P57768 344 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 ZNF211Q13398 564 aaPredicted RBP9.14□□□□□ -0.95
THBS3-210ENST00000541576 OVOS1Q6IE37 1185 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 AADACL2Q6P093 401 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.14□□□□□ -0.95
THBS3-210ENST00000541576 MCRS1Q96EZ8 462 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 SLC4A5Q9BY07 1137 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 NRDE2Q9H7Z3 1164 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 PCDHB8Q9UN66 801 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 MYBPHLA2RUH7 354 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 TRIM43BA6NCK2 446 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 PIK3R2O00459 728 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 KIAA0355O15063 1070 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 TRAPPC3O43617 180 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 GABBR2O75899 941 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 UPP2O95045 317 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 ITGB8P26012 769 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 ATP1A2P50993 1020 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 OGDHQ02218 1023 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 RNF187Q5TA31 235 aaPredicted RBP9.13□□□□□ -0.95
THBS3-210ENST00000541576 OR6B2Q6IFH4 312 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 TADA2BQ86TJ2 420 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 TMEM110Q86TL2 294 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 THEM5Q8N1Q8 247 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 TRIM43Q96BQ3 446 aaPredicted RBP9.13□□□□□ -0.95
THBS3-210ENST00000541576 VWCEQ96DN2 955 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 RTP3Q9BQQ7 232 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 ACBD6Q9BR61 282 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 MED10Q9BTT4 135 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 DUSP16Q9BY84 665 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 MCOLN1Q9GZU1 580 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 CARD9Q9H257 536 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 RBM12Q9NTZ6 932 aaKnown RBP9.13□□□□□ -0.95
THBS3-210ENST00000541576 CLDN5O00501 218 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 TADA2AO75478 443 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 CTNNA2P26232 953 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 MAN1A1P33908 653 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 CTNNA1P35221 906 aaKnown RBP9.13□□□□□ -0.95
THBS3-210ENST00000541576 PLCB3Q01970 1234 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 ZNF252P-AS1Q0IIN9 211 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 BRD3Q15059 726 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 FAM102AQ5T9C2 384 aaPredicted RBP9.13□□□□□ -0.95
THBS3-210ENST00000541576 KCTD16Q68DU8 428 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 LRRC43Q8N309 656 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 RASGEF1CQ8N431 466 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 MYCBPAPQ8TBZ2 947 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 ACTRT1Q8TDG2 376 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 BCAS4Q8TDM0 211 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 METTL5Q9NRN9 209 aaKnown RBP9.13□□□□□ -0.95
THBS3-210ENST00000541576 GEMIN8Q9NWZ8 242 aaKnown RBP9.13□□□□□ -0.95
THBS3-210ENST00000541576 CAPN7Q9Y6W3 813 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 TSC2P49815 1807 aa9.13□□□□□ -0.95
THBS3-210ENST00000541576 NRP1O14786 923 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 XPO1O14980 1071 aaKnown RBP9.12□□□□□ -0.95
THBS3-210ENST00000541576 ALDH2P05091 517 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 CSF2RAP15509 400 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 NPR3P17342 541 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 RFC1P35251 1148 aaPredicted RBP9.12□□□□□ -0.95
THBS3-210ENST00000541576 TUBB4BP68371 445 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 YWHAHQ04917 246 aaPredicted RBP9.12□□□□□ -0.95
THBS3-210ENST00000541576 ITIH3Q06033 890 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 INTS6LQ5JSJ4 861 aaKnown RBP9.12□□□□□ -0.95
THBS3-210ENST00000541576 FAM183BPQ6ZVS7 135 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 PAQR9Q6ZVX9 377 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 JOSD2Q8TAC2 188 aa9.12□□□□□ -0.95
THBS3-210ENST00000541576 PCED1BQ96HM7 432 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms