RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 PDPK2PQ6A1A2 396 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 RSPH3Q86UC2 560 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 SLC25A41Q8N5S1 370 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 PSPC1Q8WXF1 523 aaKnown RBP13.53□□□□□ -0.24
DNMT1-203ENST00000540357 PWWP2AQ96N64 755 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 PCDHB18PQ96TA0 734 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 CGRRF1Q99675 332 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 MAGED2Q9UNF1 606 aaPredicted RBP13.53□□□□□ -0.24
DNMT1-203ENST00000540357 C4AP0C0L4 1744 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 C4BP0C0L5 1744 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 TCRBV7S2A1N4TA0A589 114 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 F8W8V4 182 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 RHBDL3P58872 404 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 FAAP100Q0VG06 881 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 C12orf56Q8IXR9 622 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 AGR3Q8TD06 166 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 SLCO2A1Q92959 643 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 HSD17B14Q9BPX1 270 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 ACSS3Q9H6R3 686 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 UMODL1Q5DID0 1318 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 MROH7Q68CQ1 1323 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 TUBGCP6Q96RT7 1819 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 PSMC3P17980 439 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 PSMD7P51665 324 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 LRRC8EQ6NSJ5 796 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 GALNT15Q8N3T1 639 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 MKL1Q969V6 931 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 ASCC2Q9H1I8 757 aaPredicted RBP13.53□□□□□ -0.24
DNMT1-203ENST00000540357 GINS2Q9Y248 185 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 MYH15Q9Y2K3 1946 aa13.53□□□□□ -0.24
DNMT1-203ENST00000540357 TRDMT1O14717 391 aaKnown RBP13.52□□□□□ -0.24
DNMT1-203ENST00000540357 XPOTO43592 962 aaKnown RBP13.52□□□□□ -0.24
DNMT1-203ENST00000540357 ESRRBO95718 433 aa13.52□□□□□ -0.24
DNMT1-203ENST00000540357 FAM58BPP0C7Q3 252 aa13.52□□□□□ -0.24
DNMT1-203ENST00000540357 ZSCAN5DPP0CG00 497 aa13.52□□□□□ -0.24
DNMT1-203ENST00000540357 CLK2P49760 499 aaKnown RBP13.52□□□□□ -0.24
DNMT1-203ENST00000540357 CHN2P52757 468 aa13.52□□□□□ -0.24
DNMT1-203ENST00000540357 MAMLD1Q13495 774 aa13.52□□□□□ -0.24
DNMT1-203ENST00000540357 KIF19Q2TAC6 998 aa13.52□□□□□ -0.24
DNMT1-203ENST00000540357 BOLA3Q53S33 107 aa13.52□□□□□ -0.24
DNMT1-203ENST00000540357 BNC2Q6ZN30 1099 aaPredicted RBP13.52□□□□□ -0.24
DNMT1-203ENST00000540357 RIPOR1Q6ZS17 1223 aa13.52□□□□□ -0.24
DNMT1-203ENST00000540357 SPIRE2Q8WWL2 714 aa13.52□□□□□ -0.24
DNMT1-203ENST00000540357 TRPC5Q9UL62 973 aaPredicted RBP13.52□□□□□ -0.24
DNMT1-203ENST00000540357 CHKBQ9Y259 395 aa13.52□□□□□ -0.24
DNMT1-203ENST00000540357 IVNS1ABPQ9Y6Y0 642 aa13.52□□□□□ -0.24
DNMT1-203ENST00000540357 TGDSO95455 350 aa13.52□□□□□ -0.24
DNMT1-203ENST00000540357 MAP4K3Q8IVH8 894 aa13.52□□□□□ -0.24
DNMT1-203ENST00000540357 DEFB107AQ8IZN7 70 aa13.52□□□□□ -0.24
DNMT1-203ENST00000540357 TMA16Q96EY4 203 aaKnown RBP13.52□□□□□ -0.24
DNMT1-203ENST00000540357 NRDE2Q9H7Z3 1164 aa13.52□□□□□ -0.24
DNMT1-203ENST00000540357 EML4Q9HC35 981 aaKnown RBP13.52□□□□□ -0.24
DNMT1-203ENST00000540357 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.52□□□□□ -0.24
DNMT1-203ENST00000540357 ARL8BQ9NVJ2 186 aa13.52□□□□□ -0.24
DNMT1-203ENST00000540357 MAP3K20Q9NYL2 800 aaKnown RBP13.52□□□□□ -0.24
DNMT1-203ENST00000540357 KBTBD13C9JR72 458 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 NEMP1O14524 444 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 ZBTB39O15060 712 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 POLBP06746 335 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 PSEN1P49768 467 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 ACTR2P61160 394 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 GTF2BQ00403 316 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 INPP5AQ14642 412 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 PDK2Q15119 407 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 WDR72Q3MJ13 1102 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 RNF220Q5VTB9 566 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 ITPRIPL1Q6GPH6 555 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 B3GNT6Q6ZMB0 384 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 TRIM67Q6ZTA4 783 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 DHDDSQ86SQ9 333 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 OR6Y1Q8NGX8 325 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 LRRC15Q8TF66 581 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 VPS39Q96JC1 886 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 GPAMQ9HCL2 828 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 LNPEPQ9UIQ6 1025 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 ORC6Q9Y5N6 252 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 KCPQ6ZWJ8 1503 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 FAM237BA0A1B0GVD1 139 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 ASMTLO95671 621 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 APOA4P06727 396 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 RAG1P15918 1043 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 PRKCEQ02156 737 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 BTKQ06187 659 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 PTP4A2Q12974 167 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 ZC3H3Q8IXZ2 948 aaKnown RBP13.52□□□□□ -0.25
DNMT1-203ENST00000540357 TMEM143Q96AN5 459 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 NLRP4Q96MN2 994 aa13.52□□□□□ -0.25
DNMT1-203ENST00000540357 FDFT1P37268 417 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 SERPINB8P50452 374 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 ARL13BQ3SXY8 428 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 KCNT1Q5JUK3 1230 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 SPDYAQ5MJ70 313 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 ZFP1Q6P2D0 407 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 ZNF483Q8TF39 744 aaPredicted RBP13.51□□□□□ -0.25
DNMT1-203ENST00000540357 PGBD4Q96DM1 585 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 SHCBP1LQ9BZQ2 653 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 VAV3Q9UKW4 847 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 AP3B1O00203 1094 aa13.51□□□□□ -0.25
DNMT1-203ENST00000540357 WDR46O15213 610 aaKnown RBP13.51□□□□□ -0.25
DNMT1-203ENST00000540357 PDE5AO76074 875 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms