RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 TWSG1Q9GZX9 223 aa9.98□□□□□ -0.81
CD9-207ENST00000538418 GPR35Q9HC97 309 aa9.98□□□□□ -0.81
CD9-207ENST00000538418 NSMCE4AQ9NXX6 385 aa9.98□□□□□ -0.81
CD9-207ENST00000538418 NKIRAS2Q9NYR9 191 aa9.98□□□□□ -0.81
CD9-207ENST00000538418 XPR1Q9UBH6 696 aa9.98□□□□□ -0.81
CD9-207ENST00000538418 CROTQ9UKG9 612 aa9.98□□□□□ -0.81
CD9-207ENST00000538418 LAMC1P11047 1609 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 NHSL1Q5SYE7 1610 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 TCRBV7S2A1N4TA0A589 114 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 ZNF785A8K8V0 405 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 DNPH1O43598 174 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 RTN3O95197 1032 aaPredicted RBP9.97□□□□□ -0.81
CD9-207ENST00000538418 HMGCRP04035 888 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 HOXD12P35452 270 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 CPT1AP50416 773 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 TERF1P54274 439 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 NSUN2Q08J23 767 aaKnown RBP eCLIP9.97□□□□□ -0.81
CD9-207ENST00000538418 SCAPQ12770 1279 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 ARHGEF7Q14155 803 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 AMOTQ4VCS5 1084 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 ATPAF1Q5TC12 328 aaPredicted RBP9.97□□□□□ -0.81
CD9-207ENST00000538418 ARMC3Q5W041 872 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 HAUS3Q68CZ6 603 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 PLAG1Q6DJT9 500 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 BBS12Q6ZW61 710 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 ZNF365Q70YC5 407 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 USP37Q86T82 979 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 RTKN2Q8IZC4 609 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 ZDHHC14Q8IZN3 488 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 AOPEPQ8N6M6 819 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 LSMEM1Q8N8F7 131 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 TDRD7Q8NHU6 1098 aaKnown RBP9.97□□□□□ -0.81
CD9-207ENST00000538418 CSGALNACT1Q8TDX6 532 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 RAPGEF4Q8WZA2 1011 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 NEIL1Q96FI4 390 aaPredicted RBP9.97□□□□□ -0.81
CD9-207ENST00000538418 TRAPPC9Q96Q05 1148 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 TWNKQ96RR1 684 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 PPP1R9BQ96SB3 815 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 MPHOSPH9Q99550 1183 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 CPEB1Q9BZB8 566 aaKnown RBP9.97□□□□□ -0.81
CD9-207ENST00000538418 ORC3Q9UBD5 711 aaPredicted RBP9.97□□□□□ -0.81
CD9-207ENST00000538418 CTNND2Q9UQB3 1225 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 CCDC144AA2RUR9 1427 aa9.97□□□□□ -0.81
CD9-207ENST00000538418 LOC102723971A0A1B0GUV8 181 aa9.96□□□□□ -0.82
CD9-207ENST00000538418 H0Y3Z8 333 aa9.96□□□□□ -0.82
CD9-207ENST00000538418 SLC6A4P31645 630 aa9.96□□□□□ -0.82
CD9-207ENST00000538418 ATICP31939 592 aa9.96□□□□□ -0.82
CD9-207ENST00000538418 MC3RP41968 323 aa9.96□□□□□ -0.82
CD9-207ENST00000538418 ALDH18A1P54886 795 aaKnown RBP9.96□□□□□ -0.82
CD9-207ENST00000538418 TOP3AQ13472 1001 aaPredicted RBP9.96□□□□□ -0.82
CD9-207ENST00000538418 CRB2Q5IJ48 1285 aa9.96□□□□□ -0.82
CD9-207ENST00000538418 ACAD10Q6JQN1 1059 aa9.96□□□□□ -0.82
CD9-207ENST00000538418 MRNIPQ6NTE8 343 aa9.96□□□□□ -0.82
CD9-207ENST00000538418 VSIG10LQ86VR7 867 aa9.96□□□□□ -0.82
CD9-207ENST00000538418 FLCNQ8NFG4 579 aa9.96□□□□□ -0.82
CD9-207ENST00000538418 NLGN4YQ8NFZ3 816 aaPredicted RBP9.96□□□□□ -0.82
CD9-207ENST00000538418 SMARCC2Q8TAQ2 1214 aa9.96□□□□□ -0.82
CD9-207ENST00000538418 RSC1A1Q92681 617 aa9.96□□□□□ -0.82
CD9-207ENST00000538418 NDC1Q9BTX1 674 aa9.96□□□□□ -0.82
CD9-207ENST00000538418 GPR63Q9BZJ6 419 aa9.96□□□□□ -0.82
CD9-207ENST00000538418 TBC1D30Q9Y2I9 924 aa9.96□□□□□ -0.82
CD9-207ENST00000538418 RBM8AQ9Y5S9 174 aaKnown RBP9.96□□□□□ -0.82
CD9-207ENST00000538418 TECPR2O15040 1411 aa9.96□□□□□ -0.82
CD9-207ENST00000538418 CLTCL1P53675 1640 aa9.96□□□□□ -0.82
CD9-207ENST00000538418 M0QYG6 137 aa9.95□□□□□ -0.82
CD9-207ENST00000538418 PLOD3O60568 738 aa9.95□□□□□ -0.82
CD9-207ENST00000538418 PIM1P11309 404 aaPredicted RBP9.95□□□□□ -0.82
CD9-207ENST00000538418 TPH1P17752 444 aa9.95□□□□□ -0.82
CD9-207ENST00000538418 ATP5JP18859 108 aa9.95□□□□□ -0.82
CD9-207ENST00000538418 DRG2P55039 364 aaKnown RBP9.95□□□□□ -0.82
CD9-207ENST00000538418 PTH1RQ03431 593 aa9.95□□□□□ -0.82
CD9-207ENST00000538418 VWA3BQ502W6 1294 aa9.95□□□□□ -0.82
CD9-207ENST00000538418 SPECC1Q5M775 1068 aa9.95□□□□□ -0.82
CD9-207ENST00000538418 MFSD14BQ5SR56 506 aa9.95□□□□□ -0.82
CD9-207ENST00000538418 SLC9C2Q5TAH2 1124 aa9.95□□□□□ -0.82
CD9-207ENST00000538418 FAXCQ5TGI0 409 aa9.95□□□□□ -0.82
CD9-207ENST00000538418 INTS5Q6P9B9 1019 aaKnown RBP9.95□□□□□ -0.82
CD9-207ENST00000538418 RRAGAQ7L523 313 aa9.95□□□□□ -0.82
CD9-207ENST00000538418 FRMD5Q7Z6J6 570 aa9.95□□□□□ -0.82
CD9-207ENST00000538418 IRF2BP1Q8IU81 584 aa9.95□□□□□ -0.82
CD9-207ENST00000538418 ZMIZ2Q8NF64 920 aa9.95□□□□□ -0.82
CD9-207ENST00000538418 CEP70Q8NHQ1 597 aa9.95□□□□□ -0.82
CD9-207ENST00000538418 ADAMTS15Q8TE58 950 aa9.95□□□□□ -0.82
CD9-207ENST00000538418 GCDHQ92947 438 aaPredicted RBP9.95□□□□□ -0.82
CD9-207ENST00000538418 CEP95Q96GE4 821 aa9.95□□□□□ -0.82
CD9-207ENST00000538418 MRI1Q9BV20 369 aa9.95□□□□□ -0.82
CD9-207ENST00000538418 TINAGL1Q9GZM7 467 aaPredicted RBP9.95□□□□□ -0.82
CD9-207ENST00000538418 RSPH9Q9H1X1 276 aaPredicted RBP9.95□□□□□ -0.82
CD9-207ENST00000538418 KCNH6Q9H252 994 aa9.95□□□□□ -0.82
CD9-207ENST00000538418 XPNPEP3Q9NQH7 507 aa9.95□□□□□ -0.82
CD9-207ENST00000538418 ADAMTS6Q9UKP5 1117 aa9.95□□□□□ -0.82
CD9-207ENST00000538418 SLC45A2Q9UMX9 530 aa9.95□□□□□ -0.82
CD9-207ENST00000538418 AGAP1Q9UPQ3 857 aa9.95□□□□□ -0.82
CD9-207ENST00000538418 CTDP1Q9Y5B0 961 aaPredicted RBP9.95□□□□□ -0.82
CD9-207ENST00000538418 KIF1BO60333 1816 aa9.95□□□□□ -0.82
CD9-207ENST00000538418 RGS12O14924 1447 aa9.94□□□□□ -0.82
CD9-207ENST00000538418 ADGRF5Q8IZF2 1346 aa9.94□□□□□ -0.82
CD9-207ENST00000538418 PCDH17O14917 1159 aa9.94□□□□□ -0.82
CD9-207ENST00000538418 CCP110O43303 1012 aa9.94□□□□□ -0.82
CD9-207ENST00000538418 COQ9O75208 318 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms