RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 GPR52Q9Y2T5 361 aa6.31□□□□□ -1.4
PRKDC-208ENST00000536710 SPATA31A3Q5VYP0 1347 aa6.3□□□□□ -1.4
PRKDC-208ENST00000536710 TRGV11A0A075B6L2 103 aa6.3□□□□□ -1.4
PRKDC-208ENST00000536710 HSD3B1P14060 373 aa6.3□□□□□ -1.4
PRKDC-208ENST00000536710 ACRV1P26436 265 aa6.3□□□□□ -1.4
PRKDC-208ENST00000536710 MST1P26927 711 aa6.3□□□□□ -1.4
PRKDC-208ENST00000536710 ADORA2AP29274 412 aa6.3□□□□□ -1.4
PRKDC-208ENST00000536710 SELENOPP49908 381 aa6.3□□□□□ -1.4
PRKDC-208ENST00000536710 NSUN2Q08J23 767 aaKnown RBP eCLIP6.3□□□□□ -1.4
PRKDC-208ENST00000536710 KRTAP19-4Q3LI73 84 aa6.3□□□□□ -1.4
PRKDC-208ENST00000536710 CERCAMQ5T4B2 595 aa6.3□□□□□ -1.4
PRKDC-208ENST00000536710 ICE2Q659A1 982 aa6.3□□□□□ -1.4
PRKDC-208ENST00000536710 KLHL17Q6TDP4 642 aa6.3□□□□□ -1.4
PRKDC-208ENST00000536710 RFX8Q6ZV50 586 aa6.3□□□□□ -1.4
PRKDC-208ENST00000536710 TMPRSS9Q7Z410 1059 aa6.3□□□□□ -1.4
PRKDC-208ENST00000536710 ANKRD18AQ8IVF6 992 aa6.3□□□□□ -1.4
PRKDC-208ENST00000536710 GALNT15Q8N3T1 639 aa6.3□□□□□ -1.4
PRKDC-208ENST00000536710 CPEB3Q8NE35 698 aaKnown RBP6.3□□□□□ -1.4
PRKDC-208ENST00000536710 GCC1Q96CN9 775 aa6.3□□□□□ -1.4
PRKDC-208ENST00000536710 ZBTB45Q96K62 511 aaPredicted RBP6.3□□□□□ -1.4
PRKDC-208ENST00000536710 NELL2Q99435 816 aa6.3□□□□□ -1.4
PRKDC-208ENST00000536710 CD248Q9HCU0 757 aa6.3□□□□□ -1.4
PRKDC-208ENST00000536710 ITM2CQ9NQX7 267 aa6.3□□□□□ -1.4
PRKDC-208ENST00000536710 DNAJB11Q9UBS4 358 aa6.3□□□□□ -1.4
PRKDC-208ENST00000536710 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.3□□□□□ -1.4
PRKDC-208ENST00000536710 GAGE12BA1L429 117 aa6.29□□□□□ -1.4
PRKDC-208ENST00000536710 GAGE12HA6NDE8 117 aa6.29□□□□□ -1.4
PRKDC-208ENST00000536710 M0R3H8 397 aa6.29□□□□□ -1.4
PRKDC-208ENST00000536710 CD3EAPO15446 510 aaKnown RBP6.29□□□□□ -1.4
PRKDC-208ENST00000536710 IRAK2O43187 625 aa6.29□□□□□ -1.4
PRKDC-208ENST00000536710 WDHD1O75717 1129 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-208ENST00000536710 CDKL5O76039 1030 aa6.29□□□□□ -1.4
PRKDC-208ENST00000536710 ITGA2BP08514 1039 aa6.29□□□□□ -1.4
PRKDC-208ENST00000536710 ITGA5P08648 1049 aa6.29□□□□□ -1.4
PRKDC-208ENST00000536710 VEGFAP15692 232 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-208ENST00000536710 NPPBP16860 134 aa6.29□□□□□ -1.4
PRKDC-208ENST00000536710 NTSR1P30989 418 aa6.29□□□□□ -1.4
PRKDC-208ENST00000536710 PGDP52209 483 aa6.29□□□□□ -1.4
PRKDC-208ENST00000536710 ALDH18A1P54886 795 aaKnown RBP6.29□□□□□ -1.4
PRKDC-208ENST00000536710 PLP2Q04941 152 aa6.29□□□□□ -1.4
PRKDC-208ENST00000536710 POU5F1BQ06416 359 aa6.29□□□□□ -1.4
PRKDC-208ENST00000536710 FOXO1Q12778 655 aa6.29□□□□□ -1.4
PRKDC-208ENST00000536710 FSTL1Q12841 308 aa6.29□□□□□ -1.4
PRKDC-208ENST00000536710 CCNIQ14094 377 aa6.29□□□□□ -1.4
PRKDC-208ENST00000536710 TOB2Q14106 344 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-208ENST00000536710 ALFQ53S48 1182 aa6.29□□□□□ -1.4
PRKDC-208ENST00000536710 JMJD6Q6NYC1 403 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-208ENST00000536710 RASGRP3Q8IV61 690 aa6.29□□□□□ -1.4
PRKDC-208ENST00000536710 CCDC117Q8IWD4 279 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-208ENST00000536710 PALM2Q8IXS6 379 aa6.29□□□□□ -1.4
PRKDC-208ENST00000536710 ATRIPQ8WXE1 791 aa6.29□□□□□ -1.4
PRKDC-208ENST00000536710 NACC2Q96BF6 587 aa6.29□□□□□ -1.4
PRKDC-208ENST00000536710 FAM136AQ96C01 138 aa6.29□□□□□ -1.4
PRKDC-208ENST00000536710 ZNF668Q96K58 619 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-208ENST00000536710 HIST1H2AAQ96QV6 131 aa6.29□□□□□ -1.4
PRKDC-208ENST00000536710 KATNAL1Q9BW62 490 aa6.29□□□□□ -1.4
PRKDC-208ENST00000536710 TRIM5Q9C035 493 aa6.29□□□□□ -1.4
PRKDC-208ENST00000536710 TMEM8AQ9HCN3 771 aa6.29□□□□□ -1.4
PRKDC-208ENST00000536710 INTS13Q9NVM9 706 aa6.29□□□□□ -1.4
PRKDC-208ENST00000536710 AURKAIP1Q9NWT8 199 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-208ENST00000536710 A0A0G2JLL6 359 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-208ENST00000536710 HMX3A6NHT5 357 aa6.28□□□□□ -1.4
PRKDC-208ENST00000536710 IPO5O00410 1097 aaKnown RBP6.28□□□□□ -1.4
PRKDC-208ENST00000536710 MUSKO15146 869 aa6.28□□□□□ -1.4
PRKDC-208ENST00000536710 ZSCAN9O15535 394 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-208ENST00000536710 SNX2O60749 519 aa6.28□□□□□ -1.4
PRKDC-208ENST00000536710 PPFIA4O75335 1185 aa6.28□□□□□ -1.4
PRKDC-208ENST00000536710 VIPP01282 170 aa6.28□□□□□ -1.4
PRKDC-208ENST00000536710 CSF1RP07333 972 aa6.28□□□□□ -1.4
PRKDC-208ENST00000536710 GYS1P13807 737 aa6.28□□□□□ -1.4
PRKDC-208ENST00000536710 GATA3P23771 443 aa6.28□□□□□ -1.4
PRKDC-208ENST00000536710 DDX6P26196 483 aaKnown RBP eCLIP6.28□□□□□ -1.4
PRKDC-208ENST00000536710 MTHFSP49914 203 aa6.28□□□□□ -1.4
PRKDC-208ENST00000536710 PDE6CP51160 858 aa6.28□□□□□ -1.4
PRKDC-208ENST00000536710 VAV2P52735 878 aa6.28□□□□□ -1.4
PRKDC-208ENST00000536710 LIN54Q6MZP7 749 aa6.28□□□□□ -1.4
PRKDC-208ENST00000536710 TMPRSS6Q8IU80 811 aa6.28□□□□□ -1.4
PRKDC-208ENST00000536710 ZNF276Q8N554 614 aa6.28□□□□□ -1.4
PRKDC-208ENST00000536710 OSCP1Q8WVF1 389 aa6.28□□□□□ -1.4
PRKDC-208ENST00000536710 BOD1Q96IK1 185 aa6.28□□□□□ -1.4
PRKDC-208ENST00000536710 ZSCAN31Q96LW9 406 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-208ENST00000536710 FAM227BQ96M60 508 aa6.28□□□□□ -1.4
PRKDC-208ENST00000536710 OSBPL9Q96SU4 736 aa6.28□□□□□ -1.4
PRKDC-208ENST00000536710 ACTRT3Q9BYD9 372 aa6.28□□□□□ -1.4
PRKDC-208ENST00000536710 SAGE1Q9NXZ1 904 aa6.28□□□□□ -1.4
PRKDC-208ENST00000536710 RRN3Q9NYV6 651 aa6.28□□□□□ -1.4
PRKDC-208ENST00000536710 HERC5Q9UII4 1024 aaKnown RBP6.28□□□□□ -1.4
PRKDC-208ENST00000536710 SSX2IPQ9Y2D8 614 aa6.28□□□□□ -1.4
PRKDC-208ENST00000536710 HS3ST4Q9Y661 456 aa6.28□□□□□ -1.4
PRKDC-208ENST00000536710 UNC119BA6NIH7 251 aa6.27□□□□□ -1.41
PRKDC-208ENST00000536710 K7ESM1 405 aa6.27□□□□□ -1.41
PRKDC-208ENST00000536710 PPM1DO15297 605 aa6.27□□□□□ -1.41
PRKDC-208ENST00000536710 GLP2RO95838 553 aa6.27□□□□□ -1.41
PRKDC-208ENST00000536710 LMNAP02545 664 aaKnown RBP6.27□□□□□ -1.41
PRKDC-208ENST00000536710 HOXA5P20719 270 aa6.27□□□□□ -1.41
PRKDC-208ENST00000536710 AKT1P31749 480 aa6.27□□□□□ -1.41
PRKDC-208ENST00000536710 ARL4CP56559 192 aa6.27□□□□□ -1.41
PRKDC-208ENST00000536710 EIF2B5Q13144 721 aaKnown RBP6.27□□□□□ -1.41
PRKDC-208ENST00000536710 NFIXQ14938 502 aa6.27□□□□□ -1.41
PRKDC-208ENST00000536710 TAF12Q16514 161 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms