RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 NLRP11P59045 1033 aaKnown RBP14.63□□□□□ -0.07
LIG1-203ENST00000536218 TMEM259Q4ZIN3 620 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 BRDTQ58F21 947 aaPredicted RBP14.63□□□□□ -0.07
LIG1-203ENST00000536218 ZBTB41Q5SVQ8 909 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 TMEM63BQ5T3F8 832 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 RASSF3Q86WH2 238 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 UPF1Q92900 1129 aaKnown RBP eCLIP14.63□□□□□ -0.07
LIG1-203ENST00000536218 SYT11Q9BT88 431 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 OXCT2Q9BYC2 517 aaPredicted RBP14.63□□□□□ -0.07
LIG1-203ENST00000536218 C17orf75Q9HAS0 396 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 TMEM8AQ9HCN3 771 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 NDE1Q9NXR1 346 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 FBXO40Q9UH90 709 aa14.63□□□□□ -0.07
LIG1-203ENST00000536218 MYPNQ86TC9 1320 aa14.62□□□□□ -0.07
LIG1-203ENST00000536218 HAUS5O94927 633 aa14.62□□□□□ -0.07
LIG1-203ENST00000536218 ANXA13P27216 316 aa14.62□□□□□ -0.07
LIG1-203ENST00000536218 SSTR3P32745 418 aaPredicted RBP14.62□□□□□ -0.07
LIG1-203ENST00000536218 PGM1P36871 562 aa14.62□□□□□ -0.07
LIG1-203ENST00000536218 RBM44Q6ZP01 1051 aaKnown RBP14.62□□□□□ -0.07
LIG1-203ENST00000536218 C10orf82Q8WW14 230 aa14.62□□□□□ -0.07
LIG1-203ENST00000536218 CDCA5Q96FF9 252 aa14.62□□□□□ -0.07
LIG1-203ENST00000536218 ABHD8Q96I13 439 aa14.62□□□□□ -0.07
LIG1-203ENST00000536218 TCHPQ9BT92 498 aa14.62□□□□□ -0.07
LIG1-203ENST00000536218 INIPQ9NRY2 104 aa14.62□□□□□ -0.07
LIG1-203ENST00000536218 ARHGAP28Q9P2N2 729 aa14.62□□□□□ -0.07
LIG1-203ENST00000536218 MAFBQ9Y5Q3 323 aaPredicted RBP14.62□□□□□ -0.07
LIG1-203ENST00000536218 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.62□□□□□ -0.07
LIG1-203ENST00000536218 ANKRD62A6NC57 917 aa14.62□□□□□ -0.07
LIG1-203ENST00000536218 FARP2O94887 1054 aaPredicted RBP14.62□□□□□ -0.07
LIG1-203ENST00000536218 SRGAP2CP0DJJ0 459 aa14.62□□□□□ -0.07
LIG1-203ENST00000536218 SPOPLQ6IQ16 392 aa14.62□□□□□ -0.07
LIG1-203ENST00000536218 BTBD6Q96KE9 485 aa14.62□□□□□ -0.07
LIG1-203ENST00000536218 PCYT2Q99447 389 aa14.62□□□□□ -0.07
LIG1-203ENST00000536218 TLE6Q9H808 572 aa14.62□□□□□ -0.07
LIG1-203ENST00000536218 R3HDM2Q9Y2K5 976 aaKnown RBP14.62□□□□□ -0.07
LIG1-203ENST00000536218 NUMBLQ9Y6R0 609 aa14.62□□□□□ -0.07
LIG1-203ENST00000536218 ARIH2O95376 493 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 ESRRAP11474 423 aaPredicted RBP14.61□□□□□ -0.07
LIG1-203ENST00000536218 ANPEPP15144 967 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 YBX3P16989 372 aaKnown RBP eCLIP14.61□□□□□ -0.07
LIG1-203ENST00000536218 OXCT1P55809 520 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 SNRPFP62306 86 aaKnown RBP14.61□□□□□ -0.07
LIG1-203ENST00000536218 CDC16Q13042 620 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 MESDQ14696 234 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 RINLQ6ZS11 566 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 CCDC80Q76M96 950 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 ERO1BQ86YB8 467 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 C4orf33Q8N1A6 199 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 LRRC71Q8N4P6 559 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 EPS8L1Q8TE68 723 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 ZNF516Q92618 1163 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 COPS5Q92905 334 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 PPP2R3CQ969Q6 453 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 AGO2Q9UKV8 859 aaKnown RBP14.61□□□□□ -0.07
LIG1-203ENST00000536218 TTC7AQ9ULT0 858 aaPredicted RBP14.61□□□□□ -0.07
LIG1-203ENST00000536218 MARCKSL1P49006 195 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 SPARCL1Q14515 664 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 HSDL1Q3SXM5 330 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 FYB2Q5VWT5 728 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 ZBTB33Q86T24 672 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 ANKRD13AQ8IZ07 590 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 SLC25A41Q8N5S1 370 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 HELQQ8TDG4 1101 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 FAM81BQ96LP2 452 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 MFSD14AQ96MC6 490 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 BRD8Q9H0E9 1235 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 DDX43Q9NXZ2 648 aaKnown RBP14.61□□□□□ -0.07
LIG1-203ENST00000536218 TCRBV7S2A1N4TA0A589 114 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 TTLL13PA6NNM8 815 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 NOP56O00567 594 aaKnown RBP14.61□□□□□ -0.07
LIG1-203ENST00000536218 CHRNB2P17787 502 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 RFX1P22670 979 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 RGS2P41220 211 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 MED21Q13503 144 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 C2CD6Q53TS8 623 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 FBXO16Q8IX29 292 aaPredicted RBP14.61□□□□□ -0.07
LIG1-203ENST00000536218 ART4Q93070 314 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 PORCNQ9H237 461 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 NRBP2Q9NSY0 501 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 HEY2Q9UBP5 337 aa14.61□□□□□ -0.07
LIG1-203ENST00000536218 MYH9P35579 1960 aaKnown RBP14.6□□□□□ -0.07
LIG1-203ENST00000536218 PARP14Q460N5 1801 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 A0A0A6YYK5 440 aaPredicted RBP14.6□□□□□ -0.07
LIG1-203ENST00000536218 EDF1O60869 148 aaKnown RBP14.6□□□□□ -0.07
LIG1-203ENST00000536218 PDE5AO76074 875 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 ZWINTO95229 277 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 CDK4P11802 303 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 ICAM3P32942 547 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 CA8P35219 290 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 HOXD12P35452 270 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 CCR3P51677 355 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 BTKQ06187 659 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 PPATQ06203 517 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 SLC45A4Q5BKX6 768 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 CYP4F22Q6NT55 531 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 B3GNT6Q6ZMB0 384 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 USP37Q86T82 979 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 CPNE8Q86YQ8 564 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 FAM71AQ8IYT1 594 aa14.6□□□□□ -0.07
LIG1-203ENST00000536218 TRAPPC12Q8WVT3 735 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms