RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 TBKBP1A7MCY6 615 aa4.6□□□□□ -1.67
YBX3-205ENST00000536107 B4DLN1 442 aa4.6□□□□□ -1.67
YBX3-205ENST00000536107 APAF1O14727 1248 aa4.6□□□□□ -1.67
YBX3-205ENST00000536107 CAND2O75155 1236 aa4.6□□□□□ -1.67
YBX3-205ENST00000536107 IDH1O75874 414 aaKnown RBP4.6□□□□□ -1.67
YBX3-205ENST00000536107 NDUFB10O96000 172 aa4.6□□□□□ -1.67
YBX3-205ENST00000536107 ZNF806P0C7X5 589 aa4.6□□□□□ -1.67
YBX3-205ENST00000536107 CYP2D6P10635 497 aa4.6□□□□□ -1.67
YBX3-205ENST00000536107 CEACAM1P13688 526 aa4.6□□□□□ -1.67
YBX3-205ENST00000536107 CALML3P27482 149 aa4.6□□□□□ -1.67
YBX3-205ENST00000536107 MRPL12P52815 198 aaKnown RBP4.6□□□□□ -1.67
YBX3-205ENST00000536107 GABPAQ06546 454 aa4.6□□□□□ -1.67
YBX3-205ENST00000536107 TFCP2Q12800 502 aa4.6□□□□□ -1.67
YBX3-205ENST00000536107 MTAPQ13126 283 aa4.6□□□□□ -1.67
YBX3-205ENST00000536107 SRSF5Q13243 272 aaKnown RBP4.6□□□□□ -1.67
YBX3-205ENST00000536107 BAATQ14032 418 aaPredicted RBP4.6□□□□□ -1.67
YBX3-205ENST00000536107 MLF2Q15773 248 aaPredicted RBP4.6□□□□□ -1.67
YBX3-205ENST00000536107 LY6KQ17RY6 165 aa4.6□□□□□ -1.67
YBX3-205ENST00000536107 LETM2Q2VYF4 491 aa4.6□□□□□ -1.67
YBX3-205ENST00000536107 TTC39AQ5SRH9 613 aa4.6□□□□□ -1.67
YBX3-205ENST00000536107 SEPT14Q6ZU15 432 aa4.6□□□□□ -1.67
YBX3-205ENST00000536107 MORC4Q8TE76 937 aa4.6□□□□□ -1.67
YBX3-205ENST00000536107 MRPS27Q92552 414 aaKnown RBP4.6□□□□□ -1.67
YBX3-205ENST00000536107 STAMQ92783 540 aa4.6□□□□□ -1.67
YBX3-205ENST00000536107 GLG1Q92896 1179 aa4.6□□□□□ -1.67
YBX3-205ENST00000536107 CHMP4CQ96CF2 233 aa4.6□□□□□ -1.67
YBX3-205ENST00000536107 EDEM2Q9BV94 578 aa4.6□□□□□ -1.67
YBX3-205ENST00000536107 ZFP69BQ9UJL9 534 aa4.6□□□□□ -1.67
YBX3-205ENST00000536107 PA2G4Q9UQ80 394 aaKnown RBP4.6□□□□□ -1.67
YBX3-205ENST00000536107 PCDHB7Q9Y5E2 793 aa4.6□□□□□ -1.67
YBX3-205ENST00000536107 ZNFX1Q9P2E3 1918 aaKnown RBP4.6□□□□□ -1.67
YBX3-205ENST00000536107 SPTA1P02549 2419 aa4.6□□□□□ -1.67
YBX3-205ENST00000536107 ABCA12Q86UK0 2595 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 CAPN8A6NHC0 703 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 MASP2O00187 686 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 MATN2O00339 956 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 MAFKO60675 156 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 ARIH2O95376 493 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 CXCL14O95715 111 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 CKMP06732 381 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 GNAT1P11488 350 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 EPCAMP16422 314 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 FNTBP49356 437 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 RIPPLY3P57055 190 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 C21orf58P58505 322 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 SNAP25P60880 206 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 GPC5P78333 572 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 CYP4F3Q08477 520 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 FOXL1Q12952 345 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 IL16Q14005 1332 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 SKIDA1Q1XH10 827 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 UAP1L1Q3KQV9 507 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 SLC44A4Q53GD3 710 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 ZMAT1Q5H9K5 638 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 MUM1L1Q5H9M0 696 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 GPR149Q86SP6 731 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 TMPRSS6Q8IU80 811 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 CCDC103Q8IW40 242 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 TRIM48Q8IWZ4 208 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 AMOTL1Q8IY63 956 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 STPG3Q8N7X2 389 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 MRPL43Q8N983 215 aaKnown RBP4.59□□□□□ -1.67
YBX3-205ENST00000536107 COLGALT1Q8NBJ5 622 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 DEFB124Q8NES8 71 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 NTN5Q8WTR8 489 aaPredicted RBP4.59□□□□□ -1.67
YBX3-205ENST00000536107 KLHL6Q8WZ60 621 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 DIO2Q92813 273 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 MYADMQ96S97 322 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 NELL2Q99435 816 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 OSBPL6Q9BZF3 934 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 CRNKL1Q9BZJ0 848 aaKnown RBP4.59□□□□□ -1.67
YBX3-205ENST00000536107 SFXN1Q9H9B4 322 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 LTB4R2Q9NPC1 389 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 PRMT8Q9NR22 394 aaPredicted RBP4.59□□□□□ -1.67
YBX3-205ENST00000536107 TYW1Q9NV66 732 aaKnown RBP4.59□□□□□ -1.67
YBX3-205ENST00000536107 ASH2LQ9UBL3 628 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 FBXL7Q9UJT9 491 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 CCPG1Q9ULG6 757 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 PCDHB10Q9UN67 800 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 LZTS1Q9Y250 596 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 PAXBP1Q9Y5B6 917 aa4.59□□□□□ -1.67
YBX3-205ENST00000536107 TEX15Q9BXT5 2789 aa4.59□□□□□ -1.68
YBX3-205ENST00000536107 MYO10Q9HD67 2058 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 MICAL3Q7RTP6 2002 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 MYH13Q9UKX3 1938 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 SIPA1L1O43166 1804 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.58□□□□□ -1.68
YBX3-205ENST00000536107 KRTAP23-1A1A580 65 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 TMEM232C9JQI7 657 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 CUTAO60888 179 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 NUDT3O95989 172 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 F2P00734 622 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 SMIM10L2AP0DMW4 78 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 SMIM10L2BP0DMW5 78 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 SCG2P13521 617 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 LAG3P18627 525 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 PROZP22891 400 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 CCR10P46092 362 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 CCR3P51677 355 aa4.58□□□□□ -1.68
YBX3-205ENST00000536107 SIM1P81133 766 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms