RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 SUSD2Q9UGT4 822 aa8.95□□□□□ -0.98
CLIP1-206ENST00000535290 HCN2Q9UL51 889 aa8.95□□□□□ -0.98
CLIP1-206ENST00000535290 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.95□□□□□ -0.98
CLIP1-206ENST00000535290 STK36Q9NRP7 1315 aa8.95□□□□□ -0.98
CLIP1-206ENST00000535290 DOPEY2Q9Y3R5 2298 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 TEP1Q99973 2627 aaKnown RBP8.94□□□□□ -0.98
CLIP1-206ENST00000535290 TEX15Q9BXT5 2789 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 MYO18AQ92614 2054 aaKnown RBP8.94□□□□□ -0.98
CLIP1-206ENST00000535290 A0A1W2PQF6 199 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 TTC26A0AVF1 554 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 ERVH48-1M5A8F1 160 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 DTNBO60941 627 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 CYP11A1P05108 521 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 ZNF883P0CG24 379 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 CSH1P0DML2 217 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 CSH2P0DML3 217 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 KRT10P13645 584 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 CYP3A5P20815 502 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 GRIA2P42262 883 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 WASP42768 502 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 PEX3P56589 373 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 CXADRP78310 365 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 TLE3Q04726 772 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 KDSRQ06136 332 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 DHCR24Q15392 516 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 DDR2Q16832 855 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 HLA-BQ31612 363 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 SYCP2LQ5T4T6 812 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 RHBDF2Q6PJF5 856 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 MIB1Q86YT6 1006 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 PHTF2Q8N3S3 785 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 ZCCHC9Q8N567 271 aaKnown RBP8.94□□□□□ -0.98
CLIP1-206ENST00000535290 SPATA18Q8TC71 538 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 SPPL2BQ8TCT7 592 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 C2orf15Q8WU43 125 aaKnown RBP8.94□□□□□ -0.98
CLIP1-206ENST00000535290 KIFAP3Q92845 792 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 NXPE2Q96DL1 559 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 MTMR9Q96QG7 549 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 ARID3AQ99856 593 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 TMEM134Q9H6X4 195 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 PLEKHA5Q9HAU0 1116 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 TUFT1Q9NNX1 390 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 ARHGEF4Q9NR80 690 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 ARHGAP28Q9P2N2 729 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 UBQLN1Q9UMX0 589 aaKnown RBP8.94□□□□□ -0.98
CLIP1-206ENST00000535290 ARHGAP26Q9UNA1 814 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 PHLPP2Q6ZVD8 1323 aa8.94□□□□□ -0.98
CLIP1-206ENST00000535290 A0A1B0GTW7 788 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 BTBD18B2RXH4 712 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 CPLX1O14810 134 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 FLRT2O43155 660 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 TNFSF14O43557 240 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 SLC28A2O43868 658 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 NDUFS2O75306 463 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 ZNF217O75362 1048 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 PRPF40AO75400 957 aaKnown RBP8.93□□□□□ -0.98
CLIP1-206ENST00000535290 NOL4O94818 638 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 TCF3P15923 654 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 HDCP19113 662 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 NDUFV2P19404 249 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 RPS6KB1P23443 525 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 MATKP42679 507 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 TNFRSF4P43489 277 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 ATP2C1P98194 919 aaPredicted RBP8.93□□□□□ -0.98
CLIP1-206ENST00000535290 RESTQ13127 1097 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 NR5A1Q13285 461 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 LY6DQ14210 128 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 NOLC1Q14978 699 aaKnown RBP eCLIP8.93□□□□□ -0.98
CLIP1-206ENST00000535290 SAFBQ15424 915 aaKnown RBP eCLIP8.93□□□□□ -0.98
CLIP1-206ENST00000535290 COLEC12Q5KU26 742 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 WDR45BQ5MNZ6 344 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 WSCD1Q658N2 575 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 BLOC1S2Q6QNY1 142 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 FILIP1Q7Z7B0 1213 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 TMPRSS12Q86WS5 348 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 SNIP1Q8TAD8 396 aaKnown RBP8.93□□□□□ -0.98
CLIP1-206ENST00000535290 DNASE2BQ8WZ79 361 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 FOXJ1Q92949 421 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 MYRFLQ96LU7 910 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 LARP6Q9BRS8 491 aaKnown RBP8.93□□□□□ -0.98
CLIP1-206ENST00000535290 HAPLN2Q9GZV7 340 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 MIR1-1HGQ9H1L0 117 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 SLC6A17Q9H1V8 727 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 TMEM60Q9H2L4 133 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 BHMT2Q9H2M3 363 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 CD248Q9HCU0 757 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 PCDHB5Q9Y5E4 795 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 PCDHGB2Q9Y5G2 931 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 AK5Q9Y6K8 562 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 PLXND1Q9Y4D7 1925 aa8.93□□□□□ -0.98
CLIP1-206ENST00000535290 AHCTF1Q8WYP5 2266 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 TBC1D3BA6NDS4 549 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 LACTBL1A8MY62 500 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 LEFTY2O00292 366 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 CYB561D2O14569 222 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 NEMFO60524 1076 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 TOM1L1O75674 476 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 CER1O95813 267 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 CLTAP09496 248 aa8.92□□□□□ -0.98
CLIP1-206ENST00000535290 C6P13671 934 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms