RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 NXNQ6DKJ4 435 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 SLC39A4Q6P5W5 647 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 POLNQ7Z5Q5 900 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 CERKQ8TCT0 537 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 PPP4R1Q8TF05 950 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 CPT1BQ92523 772 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 SERAC1Q96JX3 654 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 HEXIM2Q96MH2 286 aaKnown RBP16.59■□□□□ 0.25
MCF2L-232ENST00000535094 ADPGKQ9BRR6 497 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.59■□□□□ 0.251e-6■■□□□ 14.5
MCF2L-232ENST00000535094 MAP3K13O43283 966 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 DGAT1O75907 488 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 ASNSP08243 561 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 KRT7P08729 469 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 ATP6V1B1P15313 513 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 TBXAS1P24557 533 aaPredicted RBP16.59■□□□□ 0.25
MCF2L-232ENST00000535094 STX3Q13277 289 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 LAMB3Q13751 1172 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 PIGHQ14442 188 aaPredicted RBP16.59■□□□□ 0.25
MCF2L-232ENST00000535094 TCHHL1Q5QJ38 904 aaPredicted RBP16.59■□□□□ 0.25
MCF2L-232ENST00000535094 CDCA2Q69YH5 1023 aaPredicted RBP16.59■□□□□ 0.25
MCF2L-232ENST00000535094 WDR75Q8IWA0 830 aaKnown RBP16.59■□□□□ 0.25
MCF2L-232ENST00000535094 RBM15BQ8NDT2 890 aaKnown RBP16.59■□□□□ 0.25
MCF2L-232ENST00000535094 ALKBH8Q96BT7 664 aaKnown RBP16.59■□□□□ 0.25
MCF2L-232ENST00000535094 TRIM56Q9BRZ2 755 aaKnown RBP16.59■□□□□ 0.25
MCF2L-232ENST00000535094 CISHQ9NSE2 258 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 APOBEC2Q9Y235 224 aaKnown RBP16.59■□□□□ 0.25
MCF2L-232ENST00000535094 hCG_1818297A0A087WSY0 165 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 PRPSAP2O60256 369 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 ICAM1P05362 532 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 DSG1Q02413 1049 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 GSTCDQ8NEC7 633 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 VPS11Q9H270 941 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 TELO2Q9Y4R8 837 aa16.59■□□□□ 0.25
MCF2L-232ENST00000535094 AHCYL1O43865 530 aa16.58■□□□□ 0.25
MCF2L-232ENST00000535094 DKC1O60832 514 aaKnown RBP eCLIP16.58■□□□□ 0.257e-7■■■■■ 41.9
MCF2L-232ENST00000535094 SFNP31947 248 aa16.58■□□□□ 0.25
MCF2L-232ENST00000535094 SESN2P58004 480 aaPredicted RBP16.58■□□□□ 0.25
MCF2L-232ENST00000535094 RPL10AP62906 217 aaKnown RBP16.58■□□□□ 0.25
MCF2L-232ENST00000535094 KLF1Q13351 362 aaPredicted RBP16.58■□□□□ 0.25
MCF2L-232ENST00000535094 EMC2Q15006 297 aa16.58■□□□□ 0.25
MCF2L-232ENST00000535094 MMEL1Q495T6 779 aa16.58■□□□□ 0.25
MCF2L-232ENST00000535094 SNRNP48Q6IEG0 339 aaKnown RBP16.58■□□□□ 0.25
MCF2L-232ENST00000535094 NETO2Q8NC67 525 aa16.58■□□□□ 0.25
MCF2L-232ENST00000535094 JOSD2Q8TAC2 188 aa16.58■□□□□ 0.25
MCF2L-232ENST00000535094 SH3TC2Q8TF17 1288 aa16.58■□□□□ 0.25
MCF2L-232ENST00000535094 ABTB1Q969K4 478 aaPredicted RBP16.58■□□□□ 0.25
MCF2L-232ENST00000535094 DDX56Q9NY93 547 aaKnown RBP16.58■□□□□ 0.25
MCF2L-232ENST00000535094 TCRBV9S1A1TA0A576 114 aa16.58■□□□□ 0.24
MCF2L-232ENST00000535094 E7ENQ6 273 aa16.58■□□□□ 0.24
MCF2L-232ENST00000535094 TCEA3O75764 348 aa16.58■□□□□ 0.24
MCF2L-232ENST00000535094 TMEM63AO94886 807 aa16.58■□□□□ 0.24
MCF2L-232ENST00000535094 CST3P01034 146 aaPredicted RBP16.58■□□□□ 0.24
MCF2L-232ENST00000535094 MUTP22033 750 aa16.58■□□□□ 0.24
MCF2L-232ENST00000535094 WNT7BP56706 349 aa16.58■□□□□ 0.24
MCF2L-232ENST00000535094 PEX6Q13608 980 aa16.58■□□□□ 0.24
MCF2L-232ENST00000535094 ZACNQ401N2 412 aa16.58■□□□□ 0.24
MCF2L-232ENST00000535094 TTC13Q8NBP0 860 aa16.58■□□□□ 0.24
MCF2L-232ENST00000535094 DENND1AQ8TEH3 1009 aa16.58■□□□□ 0.24
MCF2L-232ENST00000535094 PDCD2LQ9BRP1 358 aa16.58■□□□□ 0.24
MCF2L-232ENST00000535094 CENPKQ9BS16 269 aa16.58■□□□□ 0.24
MCF2L-232ENST00000535094 JPH1Q9HDC5 661 aaPredicted RBP16.58■□□□□ 0.24
MCF2L-232ENST00000535094 CLUHO75153 1309 aa16.58■□□□□ 0.24
MCF2L-232ENST00000535094 PRR5-ARHGAP8B1AHC4 643 aa16.58■□□□□ 0.24
MCF2L-232ENST00000535094 M0QYV0 167 aa16.58■□□□□ 0.24
MCF2L-232ENST00000535094 HNRNPCL1O60812 293 aaKnown RBP16.58■□□□□ 0.24
MCF2L-232ENST00000535094 APBA3O96018 575 aa16.58■□□□□ 0.24
MCF2L-232ENST00000535094 SNRPAP09012 282 aaKnown RBP16.58■□□□□ 0.24
MCF2L-232ENST00000535094 GSTT1P30711 240 aa16.58■□□□□ 0.24
MCF2L-232ENST00000535094 IGBP1P78318 339 aa16.58■□□□□ 0.24
MCF2L-232ENST00000535094 ARHGAP8P85298 464 aa16.58■□□□□ 0.24
MCF2L-232ENST00000535094 VCX3BQ9H321 246 aa16.58■□□□□ 0.24
MCF2L-232ENST00000535094 VCX3AQ9NNX9 186 aa16.58■□□□□ 0.24
MCF2L-232ENST00000535094 CYP26B1Q9NR63 512 aa16.58■□□□□ 0.24
MCF2L-232ENST00000535094 ETAA1Q9NY74 926 aa16.58■□□□□ 0.24
MCF2L-232ENST00000535094 ZNF70Q9UC06 446 aaPredicted RBP16.58■□□□□ 0.24
MCF2L-232ENST00000535094 ENTPD3O75355 529 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 TOP3BO95985 862 aaKnown RBP16.57■□□□□ 0.24
MCF2L-232ENST00000535094 TNNC2P02585 160 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 KCNA4P22459 653 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 GCAP28676 217 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 CAP2P40123 477 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 BCAR1P56945 870 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 OGDHQ02218 1023 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 C1QBPQ07021 282 aaKnown RBP16.57■□□□□ 0.24
MCF2L-232ENST00000535094 MED21Q13503 144 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 PGM5Q15124 567 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 FBXO27Q8NI29 283 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 ACSS3Q9H6R3 686 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 ANKEF1Q9NU02 776 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 LAMB1P07942 1786 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 DDX60LQ5H9U9 1706 aaKnown RBP16.57■□□□□ 0.24
MCF2L-232ENST00000535094 CCDC78A2IDD5 438 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 TM9SF1O15321 606 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 KRT38O76015 456 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 MAPTP10636 758 aaKnown RBP16.57■□□□□ 0.24
MCF2L-232ENST00000535094 CCND2P30279 289 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 TNFSF9P41273 254 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 NCKAP1LP55160 1127 aa16.57■□□□□ 0.24
MCF2L-232ENST00000535094 COG7P83436 770 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms