RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 GPR161Q8N6U8 529 aaKnown RBP9.5□□□□□ -0.89
COPB1-211ENST00000534234 B3GALNT2Q8NCR0 500 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 SH3RF2Q8TEC5 729 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 OSCP1Q8WVF1 389 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 CHFRQ96EP1 664 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 LINC00597Q9H2U6 94 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 KCTD10Q9H3F6 313 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 DPEP3Q9H4B8 488 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 ECT2Q9H8V3 914 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 VRTNQ9H8Y1 702 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 FBRSL1Q9HCM7 1045 aaKnown RBP9.5□□□□□ -0.89
COPB1-211ENST00000534234 HPSEQ9Y251 543 aa9.5□□□□□ -0.89
COPB1-211ENST00000534234 F5P12259 2224 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 ZNF840PA6NDX5 716 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 ATG13O75143 517 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 ABL1P00519 1130 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 RPN1P04843 607 aaKnown RBP9.49□□□□□ -0.89
COPB1-211ENST00000534234 HOXC13P31276 330 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 CNR2P34972 360 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 PPP3CCP48454 512 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 IFNAR2P48551 515 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 PDE6CP51160 858 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 NOP14P78316 857 aaKnown RBP9.49□□□□□ -0.89
COPB1-211ENST00000534234 DLG4P78352 724 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 NR1H3Q13133 447 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 NCOA4Q13772 614 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 SIM2Q14190 667 aaPredicted RBP9.49□□□□□ -0.89
COPB1-211ENST00000534234 SGSM1Q2NKQ1 1148 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 ZNF699Q32M78 642 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 ZNF667Q5HYK9 610 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 PRR23BQ6ZRT6 265 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 LONP2Q86WA8 852 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 CPA6Q8N4T0 437 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 TMEM174Q8WUU8 243 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 EXOC4Q96A65 974 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 ELMO3Q96BJ8 720 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 P2RY13Q9BPV8 354 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 TTLL2Q9BWV7 592 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 B3GNT5Q9BYG0 378 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 ZNF518BQ9C0D4 1074 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 ELOVL4Q9GZR5 314 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 RNF38Q9H0F5 515 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 GMEB2Q9UKD1 530 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 ARHGAP26Q9UNA1 814 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 ATP6V1DQ9Y5K8 247 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 WNT6Q9Y6F9 365 aa9.49□□□□□ -0.89
COPB1-211ENST00000534234 CLDN5O00501 218 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 IKBKBO14920 756 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 KIF20AO95235 890 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 VNN1O95497 513 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 EGFP01133 1207 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 NR3C1P04150 777 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 TCF3P15923 654 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 PFKLP17858 780 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 DRD1P21728 446 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 HOXA6P31267 233 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 NDUFA8P51970 172 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 CACNA2D1P54289 1103 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 ZXDBP98169 803 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 IFRD2Q12894 506 aaPredicted RBP9.48□□□□□ -0.89
COPB1-211ENST00000534234 TAF10Q12962 218 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 USP4Q13107 963 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 SRSF5Q13243 272 aaKnown RBP9.48□□□□□ -0.89
COPB1-211ENST00000534234 PUM1Q14671 1186 aaKnown RBP eCLIP9.48□□□□□ -0.89
COPB1-211ENST00000534234 EML3Q32P44 896 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 CEP135Q66GS9 1140 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 LAIR1Q6GTX8 287 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 PKN3Q6P5Z2 889 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 NUP93Q8N1F7 819 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 TMC2Q8TDI7 906 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 ATP2A3Q93084 1043 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 CCDC47Q96A33 483 aaKnown RBP9.48□□□□□ -0.89
COPB1-211ENST00000534234 TNIP3Q96KP6 325 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 SLITRK1Q96PX8 696 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 KCNK16Q96T55 309 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 SCAND2PQ9GZW5 306 aaPredicted RBP9.48□□□□□ -0.89
COPB1-211ENST00000534234 SMYD3Q9H7B4 428 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 TMEM30AQ9NV96 361 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 USP18Q9UMW8 372 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 TRAF3IP3Q9Y228 551 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 FRMD4BQ9Y2L6 1034 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 GTF3C3Q9Y5Q9 886 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 ANK1P16157 1881 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 TSC2P49815 1807 aa9.48□□□□□ -0.89
COPB1-211ENST00000534234 GPR179Q6PRD1 2367 aa9.47□□□□□ -0.89
COPB1-211ENST00000534234 FAM237AA0A1B0GTK4 181 aa9.47□□□□□ -0.89
COPB1-211ENST00000534234 LEFTY2O00292 366 aa9.47□□□□□ -0.89
COPB1-211ENST00000534234 CALUO43852 315 aaPredicted RBP9.47□□□□□ -0.89
COPB1-211ENST00000534234 RNF40O75150 1001 aa9.47□□□□□ -0.89
COPB1-211ENST00000534234 RHOBTB3O94955 611 aa9.47□□□□□ -0.89
COPB1-211ENST00000534234 RETP07949 1114 aa9.47□□□□□ -0.89
COPB1-211ENST00000534234 P4HA1P13674 534 aa9.47□□□□□ -0.89
COPB1-211ENST00000534234 TGM1P22735 817 aa9.47□□□□□ -0.89
COPB1-211ENST00000534234 YWHAQP27348 245 aa9.47□□□□□ -0.89
COPB1-211ENST00000534234 RAP1GAPP47736 663 aa9.47□□□□□ -0.89
COPB1-211ENST00000534234 PXNP49023 591 aaPredicted RBP9.47□□□□□ -0.89
COPB1-211ENST00000534234 SLC7A9P82251 487 aa9.47□□□□□ -0.89
COPB1-211ENST00000534234 SPEM2Q0P670 501 aa9.47□□□□□ -0.89
COPB1-211ENST00000534234 RSPO4Q2I0M5 234 aaPredicted RBP9.47□□□□□ -0.89
COPB1-211ENST00000534234 ZACNQ401N2 412 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms