RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 FNTBP49356 437 aa18.58■□□□□ 0.56
VPS51-213ENST00000533827 AP3M2P53677 418 aa18.58■□□□□ 0.56
VPS51-213ENST00000533827 NOP14P78316 857 aaKnown RBP18.58■□□□□ 0.56
VPS51-213ENST00000533827 AMPD2Q01433 879 aa18.58■□□□□ 0.56
VPS51-213ENST00000533827 TDRD10Q5VZ19 366 aaKnown RBP18.58■□□□□ 0.56
VPS51-213ENST00000533827 GPR161Q8N6U8 529 aaKnown RBP18.58■□□□□ 0.56
VPS51-213ENST00000533827 OSCP1Q8WVF1 389 aa18.58■□□□□ 0.56
VPS51-213ENST00000533827 SECISBP2LQ93073 1101 aaKnown RBP18.58■□□□□ 0.56
VPS51-213ENST00000533827 SPATA32Q96LK8 384 aa18.58■□□□□ 0.56
VPS51-213ENST00000533827 DUS2Q9NX74 493 aaKnown RBP18.58■□□□□ 0.56
VPS51-213ENST00000533827 EHD2Q9NZN4 543 aa18.58■□□□□ 0.56
VPS51-213ENST00000533827 NXF1Q9UBU9 619 aaKnown RBP18.58■□□□□ 0.56
VPS51-213ENST00000533827 HELZP42694 1942 aaKnown RBP18.57■□□□□ 0.56
VPS51-213ENST00000533827 FAM237AA0A1B0GTK4 181 aa18.57■□□□□ 0.56
VPS51-213ENST00000533827 A8MXQ7 604 aa18.57■□□□□ 0.56
VPS51-213ENST00000533827 PDXKO00764 312 aa18.57■□□□□ 0.56
VPS51-213ENST00000533827 HRO43593 1189 aa18.57■□□□□ 0.56
VPS51-213ENST00000533827 PHACTR2O75167 634 aa18.57■□□□□ 0.56
VPS51-213ENST00000533827 PFKLP17858 780 aa18.57■□□□□ 0.56
VPS51-213ENST00000533827 TGM1P22735 817 aa18.57■□□□□ 0.56
VPS51-213ENST00000533827 HOXA6P31267 233 aa18.57■□□□□ 0.56
VPS51-213ENST00000533827 GJA4P35212 333 aa18.57■□□□□ 0.56
VPS51-213ENST00000533827 CACNA2D1P54289 1103 aa18.57■□□□□ 0.56
VPS51-213ENST00000533827 KRT85P78386 507 aa18.57■□□□□ 0.56
VPS51-213ENST00000533827 GRSF1Q12849 480 aaKnown RBP eCLIP18.57■□□□□ 0.56
VPS51-213ENST00000533827 KCNB1Q14721 858 aa18.57■□□□□ 0.56
VPS51-213ENST00000533827 PKN3Q6P5Z2 889 aa18.57■□□□□ 0.56
VPS51-213ENST00000533827 LONP2Q86WA8 852 aa18.57■□□□□ 0.56
VPS51-213ENST00000533827 B3GALNT2Q8NCR0 500 aa18.57■□□□□ 0.56
VPS51-213ENST00000533827 SH3RF2Q8TEC5 729 aa18.57■□□□□ 0.56
VPS51-213ENST00000533827 ELOVL4Q9GZR5 314 aa18.57■□□□□ 0.56
VPS51-213ENST00000533827 ECT2Q9H8V3 914 aa18.57■□□□□ 0.56
VPS51-213ENST00000533827 FBRSL1Q9HCM7 1045 aaKnown RBP18.57■□□□□ 0.56
VPS51-213ENST00000533827 TMEM30AQ9NV96 361 aa18.57■□□□□ 0.56
VPS51-213ENST00000533827 TRPM5Q9NZQ8 1165 aa18.57■□□□□ 0.56
VPS51-213ENST00000533827 ARHGAP26Q9UNA1 814 aa18.57■□□□□ 0.56
VPS51-213ENST00000533827 GPR179Q6PRD1 2367 aa18.56■□□□□ 0.56
VPS51-213ENST00000533827 ZNF840PA6NDX5 716 aa18.56■□□□□ 0.56
VPS51-213ENST00000533827 VNN1O95497 513 aa18.56■□□□□ 0.56
VPS51-213ENST00000533827 HOXC13P31276 330 aa18.56■□□□□ 0.56
VPS51-213ENST00000533827 CNR2P34972 360 aa18.56■□□□□ 0.56
VPS51-213ENST00000533827 PDE6CP51160 858 aa18.56■□□□□ 0.56
VPS51-213ENST00000533827 GALK1P51570 392 aa18.56■□□□□ 0.56
VPS51-213ENST00000533827 DLG4P78352 724 aa18.56■□□□□ 0.56
VPS51-213ENST00000533827 ZXDBP98169 803 aa18.56■□□□□ 0.56
VPS51-213ENST00000533827 BIRC3Q13489 604 aa18.56■□□□□ 0.56
VPS51-213ENST00000533827 EML3Q32P44 896 aa18.56■□□□□ 0.56
VPS51-213ENST00000533827 CPA6Q8N4T0 437 aa18.56■□□□□ 0.56
VPS51-213ENST00000533827 B3GNT5Q9BYG0 378 aa18.56■□□□□ 0.56
VPS51-213ENST00000533827 ZNF518BQ9C0D4 1074 aa18.56■□□□□ 0.56
VPS51-213ENST00000533827 DLL3Q9NYJ7 618 aa18.56■□□□□ 0.56
VPS51-213ENST00000533827 WNT6Q9Y6F9 365 aa18.56■□□□□ 0.56
VPS51-213ENST00000533827 CLDN5O00501 218 aa18.55■□□□□ 0.56
VPS51-213ENST00000533827 OLFM2O95897 454 aa18.55■□□□□ 0.56
VPS51-213ENST00000533827 EGFP01133 1207 aa18.55■□□□□ 0.56
VPS51-213ENST00000533827 NR3C1P04150 777 aa18.55■□□□□ 0.56
VPS51-213ENST00000533827 SYKP43405 635 aa18.55■□□□□ 0.56
VPS51-213ENST00000533827 PPP3CCP48454 512 aa18.55■□□□□ 0.56
VPS51-213ENST00000533827 IFNAR2P48551 515 aa18.55■□□□□ 0.56
VPS51-213ENST00000533827 NDUFA8P51970 172 aa18.55■□□□□ 0.56
VPS51-213ENST00000533827 CDH8P55286 799 aa18.55■□□□□ 0.56
VPS51-213ENST00000533827 SRSF5Q13243 272 aaKnown RBP18.55■□□□□ 0.56
VPS51-213ENST00000533827 NCOA4Q13772 614 aa18.55■□□□□ 0.56
VPS51-213ENST00000533827 LPAL2Q16609 132 aa18.55■□□□□ 0.56
VPS51-213ENST00000533827 ZNF699Q32M78 642 aa18.55■□□□□ 0.56
VPS51-213ENST00000533827 ZNF667Q5HYK9 610 aa18.55■□□□□ 0.56
VPS51-213ENST00000533827 NAIF1Q69YI7 327 aaPredicted RBP18.55■□□□□ 0.56
VPS51-213ENST00000533827 LAIR1Q6GTX8 287 aa18.55■□□□□ 0.56
VPS51-213ENST00000533827 ATP2A3Q93084 1043 aa18.55■□□□□ 0.56
VPS51-213ENST00000533827 P2RY13Q9BPV8 354 aa18.55■□□□□ 0.56
VPS51-213ENST00000533827 SMYD3Q9H7B4 428 aa18.55■□□□□ 0.56
VPS51-213ENST00000533827 GMEB2Q9UKD1 530 aa18.55■□□□□ 0.56
VPS51-213ENST00000533827 RAB23Q9ULC3 237 aa18.55■□□□□ 0.56
VPS51-213ENST00000533827 TRAF3IP3Q9Y228 551 aa18.55■□□□□ 0.56
VPS51-213ENST00000533827 RPN1P04843 607 aaKnown RBP18.54■□□□□ 0.56
VPS51-213ENST00000533827 DRD1P21728 446 aa18.54■□□□□ 0.56
VPS51-213ENST00000533827 RAP1GAPP47736 663 aa18.54■□□□□ 0.56
VPS51-213ENST00000533827 SLC7A9P82251 487 aa18.54■□□□□ 0.56
VPS51-213ENST00000533827 TAF10Q12962 218 aa18.54■□□□□ 0.56
VPS51-213ENST00000533827 SIM2Q14190 667 aaPredicted RBP18.54■□□□□ 0.56
VPS51-213ENST00000533827 PUM1Q14671 1186 aaKnown RBP eCLIP18.54■□□□□ 0.56
VPS51-213ENST00000533827 ZACNQ401N2 412 aa18.54■□□□□ 0.56
VPS51-213ENST00000533827 HEATR6Q6AI08 1181 aaKnown RBP18.54■□□□□ 0.56
VPS51-213ENST00000533827 PRR23BQ6ZRT6 265 aa18.54■□□□□ 0.56
VPS51-213ENST00000533827 WDR5BQ86VZ2 330 aa18.54■□□□□ 0.56
VPS51-213ENST00000533827 TTC16Q8NEE8 873 aa18.54■□□□□ 0.56
VPS51-213ENST00000533827 TMC2Q8TDI7 906 aa18.54■□□□□ 0.56
VPS51-213ENST00000533827 ELMO3Q96BJ8 720 aa18.54■□□□□ 0.56
VPS51-213ENST00000533827 RNF38Q9H0F5 515 aa18.54■□□□□ 0.56
VPS51-213ENST00000533827 SDCBP2Q9H190 292 aa18.54■□□□□ 0.56
VPS51-213ENST00000533827 LINC00597Q9H2U6 94 aa18.54■□□□□ 0.56
VPS51-213ENST00000533827 PARD6AQ9NPB6 346 aa18.54■□□□□ 0.56
VPS51-213ENST00000533827 LEFTY2O00292 366 aa18.53■□□□□ 0.56
VPS51-213ENST00000533827 ATG13O75143 517 aa18.53■□□□□ 0.56
VPS51-213ENST00000533827 RNF40O75150 1001 aa18.53■□□□□ 0.56
VPS51-213ENST00000533827 RHOBTB3O94955 611 aa18.53■□□□□ 0.56
VPS51-213ENST00000533827 OAS1P00973 400 aaKnown RBP18.53■□□□□ 0.56
VPS51-213ENST00000533827 PRR29P0C7W0 189 aa18.53■□□□□ 0.56
VPS51-213ENST00000533827 RSPO4Q2I0M5 234 aaPredicted RBP18.53■□□□□ 0.56
VPS51-213ENST00000533827 FBXO43Q4G163 708 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms