RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 ANO7Q6IWH7 933 aa18.53■□□□□ 0.56
PKP3-208ENST00000531857 LIMS2Q7Z4I7 341 aa18.53■□□□□ 0.56
PKP3-208ENST00000531857 RASSF3Q86WH2 238 aa18.53■□□□□ 0.56
PKP3-208ENST00000531857 SFTPA1Q8IWL2 248 aa18.53■□□□□ 0.56
PKP3-208ENST00000531857 SYCP3Q8IZU3 236 aa18.53■□□□□ 0.56
PKP3-208ENST00000531857 CCDC33Q8N5R6 958 aa18.53■□□□□ 0.56
PKP3-208ENST00000531857 SPATA18Q8TC71 538 aa18.53■□□□□ 0.56
PKP3-208ENST00000531857 MYLPFQ96A32 169 aa18.53■□□□□ 0.56
PKP3-208ENST00000531857 CLIC6Q96NY7 704 aa18.53■□□□□ 0.56
PKP3-208ENST00000531857 SYT15Q9BQS2 421 aa18.53■□□□□ 0.56
PKP3-208ENST00000531857 CRTAC1Q9NQ79 661 aa18.53■□□□□ 0.56
PKP3-208ENST00000531857 CCDC39Q9UFE4 941 aa18.53■□□□□ 0.56
PKP3-208ENST00000531857 FBXO2Q9UK22 296 aaPredicted RBP18.53■□□□□ 0.56
PKP3-208ENST00000531857 LEFTY2O00292 366 aa18.52■□□□□ 0.56
PKP3-208ENST00000531857 NFATC1O95644 943 aa18.52■□□□□ 0.56
PKP3-208ENST00000531857 TMEM191BP0C7N4 346 aa18.52■□□□□ 0.56
PKP3-208ENST00000531857 HNRNPLP14866 589 aaKnown RBP eCLIP18.52■□□□□ 0.56
PKP3-208ENST00000531857 BDNFP23560 247 aa18.52■□□□□ 0.56
PKP3-208ENST00000531857 USP39Q53GS9 565 aaKnown RBP18.52■□□□□ 0.56
PKP3-208ENST00000531857 SH3PXD2AQ5TCZ1 1133 aa18.52■□□□□ 0.56
PKP3-208ENST00000531857 RRAGBQ5VZM2 374 aa18.52■□□□□ 0.56
PKP3-208ENST00000531857 SV2BQ7L1I2 683 aa18.52■□□□□ 0.56
PKP3-208ENST00000531857 MDGA1Q8NFP4 955 aa18.52■□□□□ 0.56
PKP3-208ENST00000531857 OR5B17Q8NGF7 314 aa18.52■□□□□ 0.56
PKP3-208ENST00000531857 SPATA17Q96L03 361 aa18.52■□□□□ 0.56
PKP3-208ENST00000531857 RNF38Q9H0F5 515 aa18.52■□□□□ 0.56
PKP3-208ENST00000531857 OLFML3Q9NRN5 406 aa18.52■□□□□ 0.56
PKP3-208ENST00000531857 MAGEC2Q9UBF1 373 aaPredicted RBP18.52■□□□□ 0.56
PKP3-208ENST00000531857 MMP17Q9ULZ9 603 aa18.52■□□□□ 0.56
PKP3-208ENST00000531857 PCDHB13Q9Y5F0 798 aa18.52■□□□□ 0.56
PKP3-208ENST00000531857 AKAP13Q12802 2813 aa18.52■□□□□ 0.55
PKP3-208ENST00000531857 CDX4O14627 284 aaPredicted RBP18.51■□□□□ 0.55
PKP3-208ENST00000531857 SCAMP3O14828 347 aaKnown RBP18.51■□□□□ 0.55
PKP3-208ENST00000531857 KHNYNO15037 678 aaKnown RBP18.51■□□□□ 0.55
PKP3-208ENST00000531857 PRPF6O94906 941 aaKnown RBP18.51■□□□□ 0.55
PKP3-208ENST00000531857 TOP3BO95985 862 aaKnown RBP18.51■□□□□ 0.55
PKP3-208ENST00000531857 CYP17A1P05093 508 aa18.51■□□□□ 0.55
PKP3-208ENST00000531857 PDGFRBP09619 1106 aa18.51■□□□□ 0.55
PKP3-208ENST00000531857 PDIA4P13667 645 aaKnown RBP18.51■□□□□ 0.55
PKP3-208ENST00000531857 IDEP14735 1019 aa18.51■□□□□ 0.55
PKP3-208ENST00000531857 SPINK2P20155 84 aa18.51■□□□□ 0.55
PKP3-208ENST00000531857 GRIK1P39086 918 aa18.51■□□□□ 0.55
PKP3-208ENST00000531857 ZNF252P-AS1Q0IIN9 211 aa18.51■□□□□ 0.55
PKP3-208ENST00000531857 MESP2Q0VG99 397 aa18.51■□□□□ 0.55
PKP3-208ENST00000531857 FOXC1Q12948 553 aa18.51■□□□□ 0.55
PKP3-208ENST00000531857 CRY1Q16526 586 aa18.51■□□□□ 0.55
PKP3-208ENST00000531857 DAB2IPQ5VWQ8 1189 aa18.51■□□□□ 0.55
PKP3-208ENST00000531857 TMEM92Q6UXU6 159 aa18.51■□□□□ 0.55
PKP3-208ENST00000531857 C4orf50Q6ZRC1 276 aa18.51■□□□□ 0.55
PKP3-208ENST00000531857 FILIP1Q7Z7B0 1213 aa18.51■□□□□ 0.55
PKP3-208ENST00000531857 TTC30AQ86WT1 665 aa18.51■□□□□ 0.55
PKP3-208ENST00000531857 HPDLQ96IR7 371 aa18.51■□□□□ 0.55
PKP3-208ENST00000531857 CNOT6LQ96LI5 555 aaKnown RBP18.51■□□□□ 0.55
PKP3-208ENST00000531857 INTS13Q9NVM9 706 aa18.51■□□□□ 0.55
PKP3-208ENST00000531857 CDH9Q9ULB4 789 aa18.51■□□□□ 0.55
PKP3-208ENST00000531857 WASF3Q9UPY6 502 aa18.51■□□□□ 0.55
PKP3-208ENST00000531857 ZZEF1O43149 2961 aa18.5■□□□□ 0.55
PKP3-208ENST00000531857 FRMD3A2A2Y4 597 aa18.5■□□□□ 0.55
PKP3-208ENST00000531857 CHRM1P11229 460 aaPredicted RBP18.5■□□□□ 0.55
PKP3-208ENST00000531857 SLC6A11P48066 632 aa18.5■□□□□ 0.55
PKP3-208ENST00000531857 IRX4P78413 519 aa18.5■□□□□ 0.55
PKP3-208ENST00000531857 NUCB2P80303 420 aa18.5■□□□□ 0.55
PKP3-208ENST00000531857 CYP27A1Q02318 531 aa18.5■□□□□ 0.55
PKP3-208ENST00000531857 VSTM1Q6UX27 236 aa18.5■□□□□ 0.55
PKP3-208ENST00000531857 DPH6Q7L8W6 267 aa18.5■□□□□ 0.55
PKP3-208ENST00000531857 CYP2U1Q7Z449 544 aa18.5■□□□□ 0.55
PKP3-208ENST00000531857 ADGRG2Q8IZP9 1017 aa18.5■□□□□ 0.55
PKP3-208ENST00000531857 GPD1LQ8N335 351 aa18.5■□□□□ 0.55
PKP3-208ENST00000531857 CCDC26Q8TAB7 109 aa18.5■□□□□ 0.55
PKP3-208ENST00000531857 INTS4Q96HW7 963 aaKnown RBP18.5■□□□□ 0.55
PKP3-208ENST00000531857 PANK2Q9BZ23 570 aa18.5■□□□□ 0.55
PKP3-208ENST00000531857 TMEM9BQ9NQ34 198 aa18.5■□□□□ 0.55
PKP3-208ENST00000531857 TRPM5Q9NZQ8 1165 aa18.5■□□□□ 0.55
PKP3-208ENST00000531857 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.5■□□□□ 0.55
PKP3-208ENST00000531857 NME7Q9Y5B8 376 aa18.5■□□□□ 0.55
PKP3-208ENST00000531857 SRPRBQ9Y5M8 271 aaKnown RBP18.5■□□□□ 0.55
PKP3-208ENST00000531857 GON4LQ3T8J9 2241 aa18.5■□□□□ 0.55
PKP3-208ENST00000531857 A0A087X0B3 334 aa18.49■□□□□ 0.55
PKP3-208ENST00000531857 ZNF840PA6NDX5 716 aa18.49■□□□□ 0.55
PKP3-208ENST00000531857 DHPSP49366 369 aaPredicted RBP18.49■□□□□ 0.55
PKP3-208ENST00000531857 PDE6CP51160 858 aa18.49■□□□□ 0.55
PKP3-208ENST00000531857 MYO1EQ12965 1108 aa18.49■□□□□ 0.55
PKP3-208ENST00000531857 FAM173BQ6P4H8 233 aa18.49■□□□□ 0.55
PKP3-208ENST00000531857 UNQ6494/PRO21346Q6UXR6 183 aa18.49■□□□□ 0.55
PKP3-208ENST00000531857 DENND5BQ6ZUT9 1274 aa18.49■□□□□ 0.55
PKP3-208ENST00000531857 C11orf74Q86VG3 221 aa18.49■□□□□ 0.55
PKP3-208ENST00000531857 ALLCQ8N6M5 410 aa18.49■□□□□ 0.55
PKP3-208ENST00000531857 FRMD1Q8N878 549 aa18.49■□□□□ 0.55
PKP3-208ENST00000531857 GLIS3Q8NEA6 775 aa18.49■□□□□ 0.55
PKP3-208ENST00000531857 OLIG1Q8TAK6 271 aa18.49■□□□□ 0.55
PKP3-208ENST00000531857 RLN3Q8WXF3 142 aa18.49■□□□□ 0.55
PKP3-208ENST00000531857 PIGKQ92643 395 aa18.49■□□□□ 0.55
PKP3-208ENST00000531857 PCED1BQ96HM7 432 aa18.49■□□□□ 0.55
PKP3-208ENST00000531857 ANKRD36BP1Q96IX9 119 aa18.49■□□□□ 0.55
PKP3-208ENST00000531857 PANK4Q9NVE7 773 aa18.49■□□□□ 0.55
PKP3-208ENST00000531857 SMPD4Q9NXE4 827 aa18.49■□□□□ 0.55
PKP3-208ENST00000531857 ZMIZ1Q9ULJ6 1067 aa18.49■□□□□ 0.55
PKP3-208ENST00000531857 IGF2RP11717 2491 aa18.49■□□□□ 0.55
PKP3-208ENST00000531857 VPS37CA5D8V6 355 aaPredicted RBP18.48■□□□□ 0.55
PKP3-208ENST00000531857 PFKLP17858 780 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms