RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 CDH8P55286 799 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 DLG4P78352 724 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 LRRC63Q05C16 580 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 GRSF1Q12849 480 aaKnown RBP eCLIP13.36□□□□□ -0.27
C11orf54-210ENST00000531516 IFRD2Q12894 506 aaPredicted RBP13.36□□□□□ -0.27
C11orf54-210ENST00000531516 MTF1Q14872 753 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 TCERG1LQ5VWI1 586 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 SCARA3Q6AZY7 606 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 TMEM150AQ86TG1 271 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 DDX42Q86XP3 938 aaKnown RBP eCLIP13.36□□□□□ -0.27
C11orf54-210ENST00000531516 PLEKHO2Q8TD55 490 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 OVCA2Q8WZ82 227 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 USP13Q92995 863 aaPredicted RBP13.36□□□□□ -0.27
C11orf54-210ENST00000531516 FBXO32Q969P5 355 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 RSPRY1Q96DX4 576 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 FAXDC2Q96IV6 333 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 ZFYVE19Q96K21 471 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 HINFPQ9BQA5 517 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 ZNF518BQ9C0D4 1074 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 NACA2Q9H009 215 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 SMG9Q9H0W8 520 aaKnown RBP13.36□□□□□ -0.27
C11orf54-210ENST00000531516 GZF1Q9H116 711 aaPredicted RBP13.36□□□□□ -0.27
C11orf54-210ENST00000531516 CHRDQ9H2X0 955 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 DPEP3Q9H4B8 488 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 FBXO44Q9H4M3 255 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 COMMD8Q9NX08 183 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 DUS2Q9NX74 493 aaKnown RBP13.36□□□□□ -0.27
C11orf54-210ENST00000531516 GTSE1Q9NYZ3 720 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 PCDHGA2Q9Y5H1 932 aa13.36□□□□□ -0.27
C11orf54-210ENST00000531516 PRR23AA6NEV1 266 aa13.35□□□□□ -0.27
C11orf54-210ENST00000531516 SLC9A3R1O14745 358 aaPredicted RBP13.35□□□□□ -0.27
C11orf54-210ENST00000531516 SLC16A3O15427 465 aaKnown RBP13.35□□□□□ -0.27
C11orf54-210ENST00000531516 ATG13O75143 517 aa13.35□□□□□ -0.27
C11orf54-210ENST00000531516 VNN1O95497 513 aa13.35□□□□□ -0.27
C11orf54-210ENST00000531516 FAM200BP0CF97 657 aa13.35□□□□□ -0.27
C11orf54-210ENST00000531516 MXI1P50539 228 aa13.35□□□□□ -0.27
C11orf54-210ENST00000531516 NDST1P52848 882 aa13.35□□□□□ -0.27
C11orf54-210ENST00000531516 SLC8A3P57103 927 aa13.35□□□□□ -0.27
C11orf54-210ENST00000531516 CETN1Q12798 172 aa13.35□□□□□ -0.27
C11orf54-210ENST00000531516 CCDC142Q17RM4 750 aa13.35□□□□□ -0.27
C11orf54-210ENST00000531516 COBLL1Q53SF7 1204 aa13.35□□□□□ -0.27
C11orf54-210ENST00000531516 MAMSTRQ6ZN01 415 aa13.35□□□□□ -0.27
C11orf54-210ENST00000531516 ACOT1Q86TX2 421 aa13.35□□□□□ -0.27
C11orf54-210ENST00000531516 ELOA2Q8IYF1 753 aaPredicted RBP13.35□□□□□ -0.27
C11orf54-210ENST00000531516 ARL14EPQ8N8R7 260 aaPredicted RBP13.35□□□□□ -0.27
C11orf54-210ENST00000531516 TTC8Q8TAM2 541 aa13.35□□□□□ -0.27
C11orf54-210ENST00000531516 TTLL2Q9BWV7 592 aa13.35□□□□□ -0.27
C11orf54-210ENST00000531516 NT5C1AQ9BXI3 368 aa13.35□□□□□ -0.27
C11orf54-210ENST00000531516 B3GNT5Q9BYG0 378 aa13.35□□□□□ -0.27
C11orf54-210ENST00000531516 NIF3L1Q9GZT8 377 aa13.35□□□□□ -0.27
C11orf54-210ENST00000531516 METTL14Q9HCE5 456 aaKnown RBP13.35□□□□□ -0.27
C11orf54-210ENST00000531516 ZSCAN32Q9NX65 697 aa13.35□□□□□ -0.27
C11orf54-210ENST00000531516 ARHGAP26Q9UNA1 814 aa13.35□□□□□ -0.27
C11orf54-210ENST00000531516 PCDHA5Q9Y5H7 936 aa13.35□□□□□ -0.27
C11orf54-210ENST00000531516 ANK1P16157 1881 aa13.35□□□□□ -0.27
C11orf54-210ENST00000531516 BICDL2A1A5D9 508 aa13.34□□□□□ -0.27
C11orf54-210ENST00000531516 AP1G2O75843 785 aa13.34□□□□□ -0.27
C11orf54-210ENST00000531516 NFATC1O95644 943 aa13.34□□□□□ -0.27
C11orf54-210ENST00000531516 TRIM49P0CI25 452 aa13.34□□□□□ -0.27
C11orf54-210ENST00000531516 TRIM49CP0CI26 452 aa13.34□□□□□ -0.27
C11orf54-210ENST00000531516 PRCPP42785 496 aa13.34□□□□□ -0.27
C11orf54-210ENST00000531516 RAP1GAPP47736 663 aa13.34□□□□□ -0.27
C11orf54-210ENST00000531516 CXCL12P48061 93 aa13.34□□□□□ -0.27
C11orf54-210ENST00000531516 YWHAEP62258 255 aaKnown RBP13.34□□□□□ -0.27
C11orf54-210ENST00000531516 TAF10Q12962 218 aa13.34□□□□□ -0.27
C11orf54-210ENST00000531516 MTAPQ13126 283 aa13.34□□□□□ -0.27
C11orf54-210ENST00000531516 DCAF17Q5H9S7 520 aaPredicted RBP13.34□□□□□ -0.27
C11orf54-210ENST00000531516 FAM35AQ86V20 835 aa13.34□□□□□ -0.27
C11orf54-210ENST00000531516 SMYD4Q8IYR2 804 aaPredicted RBP13.34□□□□□ -0.27
C11orf54-210ENST00000531516 CRYBG2Q8N1P7 616 aa13.34□□□□□ -0.27
C11orf54-210ENST00000531516 SPEM1Q8N4L4 309 aa13.34□□□□□ -0.27
C11orf54-210ENST00000531516 KIAA1958Q8N8K9 716 aa13.34□□□□□ -0.27
C11orf54-210ENST00000531516 FBXL13Q8NEE6 735 aa13.34□□□□□ -0.27
C11orf54-210ENST00000531516 ENGASEQ8NFI3 743 aa13.34□□□□□ -0.27
C11orf54-210ENST00000531516 SH3RF2Q8TEC5 729 aa13.34□□□□□ -0.27
C11orf54-210ENST00000531516 OSCP1Q8WVF1 389 aa13.34□□□□□ -0.27
C11orf54-210ENST00000531516 DHTKD1Q96HY7 919 aaPredicted RBP13.34□□□□□ -0.27
C11orf54-210ENST00000531516 FAM83CQ9BQN1 747 aa13.34□□□□□ -0.27
C11orf54-210ENST00000531516 EBF3Q9H4W6 596 aa13.34□□□□□ -0.27
C11orf54-210ENST00000531516 FAM124BQ9H5Z6 455 aaPredicted RBP13.34□□□□□ -0.27
C11orf54-210ENST00000531516 KRT82Q9NSB4 513 aa13.34□□□□□ -0.27
C11orf54-210ENST00000531516 ARMCX3Q9UH62 379 aaPredicted RBP13.34□□□□□ -0.27
C11orf54-210ENST00000531516 RAB23Q9ULC3 237 aa13.34□□□□□ -0.27
C11orf54-210ENST00000531516 CCL26Q9Y258 94 aa13.34□□□□□ -0.27
C11orf54-210ENST00000531516 R4GN57 208 aa13.34□□□□□ -0.27
C11orf54-210ENST00000531516 TSC2P49815 1807 aa13.34□□□□□ -0.27
C11orf54-210ENST00000531516 NOTCH4Q99466 2003 aa13.34□□□□□ -0.27
C11orf54-210ENST00000531516 TCHHQ07283 1943 aa13.33□□□□□ -0.28
C11orf54-210ENST00000531516 C2orf78A6NCI8 922 aa13.33□□□□□ -0.28
C11orf54-210ENST00000531516 ZNF840PA6NDX5 716 aa13.33□□□□□ -0.28
C11orf54-210ENST00000531516 CLDN5O00501 218 aa13.33□□□□□ -0.28
C11orf54-210ENST00000531516 MBL2P11226 248 aaPredicted RBP13.33□□□□□ -0.28
C11orf54-210ENST00000531516 CHRNB1P11230 501 aa13.33□□□□□ -0.28
C11orf54-210ENST00000531516 TCF3P15923 654 aa13.33□□□□□ -0.28
C11orf54-210ENST00000531516 CD58P19256 250 aa13.33□□□□□ -0.28
C11orf54-210ENST00000531516 DRD1P21728 446 aa13.33□□□□□ -0.28
C11orf54-210ENST00000531516 SOX9P48436 509 aa13.33□□□□□ -0.28
C11orf54-210ENST00000531516 TNK2Q07912 1038 aa13.33□□□□□ -0.28
C11orf54-210ENST00000531516 GOLGA8FQ08AF8 430 aa13.33□□□□□ -0.28
C11orf54-210ENST00000531516 GOLGA8DPQ0D2H9 430 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms