RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 GPRC5AQ8NFJ5 357 aa18.03■□□□□ 0.48
BRCA2-204ENST00000530893 GDAP1Q8TB36 358 aa18.03■□□□□ 0.48
BRCA2-204ENST00000530893 AFG1LQ8WV93 481 aa18.03■□□□□ 0.48
BRCA2-204ENST00000530893 CPB2Q96IY4 423 aa18.03■□□□□ 0.48
BRCA2-204ENST00000530893 SMC6Q96SB8 1091 aa18.03■□□□□ 0.48
BRCA2-204ENST00000530893 NT5C1AQ9BXI3 368 aa18.03■□□□□ 0.48
BRCA2-204ENST00000530893 DPP3Q9NY33 737 aa18.03■□□□□ 0.48
BRCA2-204ENST00000530893 RNF181Q9P0P0 153 aa18.03■□□□□ 0.48
BRCA2-204ENST00000530893 ASMTLO95671 621 aa18.03■□□□□ 0.48
BRCA2-204ENST00000530893 GEMIN4P57678 1058 aaKnown RBP18.03■□□□□ 0.48
BRCA2-204ENST00000530893 ORC1Q13415 861 aa18.03■□□□□ 0.48
BRCA2-204ENST00000530893 TFDP2Q14188 446 aa18.03■□□□□ 0.48
BRCA2-204ENST00000530893 MTFR1Q15390 333 aa18.03■□□□□ 0.48
BRCA2-204ENST00000530893 ZNF410Q86VK4 478 aa18.03■□□□□ 0.48
BRCA2-204ENST00000530893 PYROXD1Q8WU10 500 aa18.03■□□□□ 0.48
BRCA2-204ENST00000530893 TRABDQ9H4I3 376 aa18.03■□□□□ 0.48
BRCA2-204ENST00000530893 SAE1Q9UBE0 346 aaPredicted RBP18.03■□□□□ 0.48
BRCA2-204ENST00000530893 PCSK1NQ9UHG2 260 aa18.03■□□□□ 0.48
BRCA2-204ENST00000530893 DERAQ9Y315 318 aa18.03■□□□□ 0.48
BRCA2-204ENST00000530893 CITO14578 2027 aa18.02■□□□□ 0.48
BRCA2-204ENST00000530893 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.02■□□□□ 0.48
BRCA2-204ENST00000530893 CFAP73A6NFT4 308 aa18.02■□□□□ 0.48
BRCA2-204ENST00000530893 FOXO6A8MYZ6 492 aa18.02■□□□□ 0.48
BRCA2-204ENST00000530893 POC1B-GALNT4F8VUJ3 575 aa18.02■□□□□ 0.48
BRCA2-204ENST00000530893 TSPAN1O60635 241 aa18.02■□□□□ 0.48
BRCA2-204ENST00000530893 KRT15P19012 456 aa18.02■□□□□ 0.48
BRCA2-204ENST00000530893 RPL22P35268 128 aaKnown RBP18.02■□□□□ 0.48
BRCA2-204ENST00000530893 NDST1P52848 882 aa18.02■□□□□ 0.48
BRCA2-204ENST00000530893 GDF10P55107 478 aa18.02■□□□□ 0.48
BRCA2-204ENST00000530893 EIF3EP60228 445 aaKnown RBP18.02■□□□□ 0.48
BRCA2-204ENST00000530893 ACVR2BQ13705 512 aa18.02■□□□□ 0.48
BRCA2-204ENST00000530893 SPARCL1Q14515 664 aa18.02■□□□□ 0.48
BRCA2-204ENST00000530893 KLHL38Q2WGJ6 581 aa18.02■□□□□ 0.48
BRCA2-204ENST00000530893 DCAF4L1Q3SXM0 396 aa18.02■□□□□ 0.48
BRCA2-204ENST00000530893 CYB5D1Q6P9G0 228 aa18.02■□□□□ 0.48
BRCA2-204ENST00000530893 MAMDC4Q6UXC1 1216 aa18.02■□□□□ 0.48
BRCA2-204ENST00000530893 APBB1IPQ7Z5R6 666 aaPredicted RBP18.02■□□□□ 0.48
BRCA2-204ENST00000530893 VSIG1Q86XK7 387 aa18.02■□□□□ 0.48
BRCA2-204ENST00000530893 PDIK1LQ8N165 341 aa18.02■□□□□ 0.48
BRCA2-204ENST00000530893 DENND1AQ8TEH3 1009 aa18.02■□□□□ 0.48
BRCA2-204ENST00000530893 NLRP7Q8WX94 980 aa18.02■□□□□ 0.48
BRCA2-204ENST00000530893 NCAPGQ9BPX3 1015 aa18.02■□□□□ 0.48
BRCA2-204ENST00000530893 C16orf70Q9BSU1 422 aa18.02■□□□□ 0.48
BRCA2-204ENST00000530893 MAK16Q9BXY0 300 aaKnown RBP18.02■□□□□ 0.48
BRCA2-204ENST00000530893 PLEKHA5Q9HAU0 1116 aa18.02■□□□□ 0.48
BRCA2-204ENST00000530893 HAUS2Q9NVX0 235 aa18.02■□□□□ 0.48
BRCA2-204ENST00000530893 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.02■□□□□ 0.48
BRCA2-204ENST00000530893 PRKAG3Q9UGI9 489 aa18.02■□□□□ 0.48
BRCA2-204ENST00000530893 ZMYND8Q9ULU4 1186 aaPredicted RBP18.02■□□□□ 0.48
BRCA2-204ENST00000530893 C2CD4BA6NLJ0 364 aa18.01■□□□□ 0.47
BRCA2-204ENST00000530893 STRNO43815 780 aa18.01■□□□□ 0.47
BRCA2-204ENST00000530893 VTNP04004 478 aa18.01■□□□□ 0.47
BRCA2-204ENST00000530893 CD48P09326 243 aa18.01■□□□□ 0.47
BRCA2-204ENST00000530893 GRM5P41594 1212 aa18.01■□□□□ 0.47
BRCA2-204ENST00000530893 CBLBQ13191 982 aa18.01■□□□□ 0.47
BRCA2-204ENST00000530893 MAP7D3Q8IWC1 876 aa18.01■□□□□ 0.47
BRCA2-204ENST00000530893 HSPH1Q92598 858 aa18.01■□□□□ 0.47
BRCA2-204ENST00000530893 CALN1Q9BXU9 219 aa18.01■□□□□ 0.47
BRCA2-204ENST00000530893 MLXIPLQ9NP71 852 aa18.01■□□□□ 0.47
BRCA2-204ENST00000530893 H3BRB1 525 aa18.01■□□□□ 0.47
BRCA2-204ENST00000530893 CSDE1O75534 798 aaKnown RBP18.01■□□□□ 0.47
BRCA2-204ENST00000530893 ITGBL1O95965 494 aaPredicted RBP18.01■□□□□ 0.47
BRCA2-204ENST00000530893 SETSIPP0DME0 302 aa18.01■□□□□ 0.47
BRCA2-204ENST00000530893 RBP3P10745 1247 aa18.01■□□□□ 0.47
BRCA2-204ENST00000530893 ATP2A2P16615 1042 aaKnown RBP18.01■□□□□ 0.47
BRCA2-204ENST00000530893 DESP17661 470 aa18.01■□□□□ 0.47
BRCA2-204ENST00000530893 TAC1P20366 129 aa18.01■□□□□ 0.47
BRCA2-204ENST00000530893 SNX16P57768 344 aa18.01■□□□□ 0.47
BRCA2-204ENST00000530893 PDK2Q15119 407 aa18.01■□□□□ 0.47
BRCA2-204ENST00000530893 NOMO1Q15155 1222 aa18.01■□□□□ 0.47
BRCA2-204ENST00000530893 MAP1SQ66K74 1059 aaPredicted RBP18.01■□□□□ 0.47
BRCA2-204ENST00000530893 SPATA18Q8TC71 538 aa18.01■□□□□ 0.47
BRCA2-204ENST00000530893 USP6NLQ92738 828 aa18.01■□□□□ 0.47
BRCA2-204ENST00000530893 TUT1Q9H6E5 874 aaKnown RBP18.01■□□□□ 0.47
BRCA2-204ENST00000530893 ACSS3Q9H6R3 686 aa18.01■□□□□ 0.47
BRCA2-204ENST00000530893 RABGEF1Q9UJ41 708 aa18.01■□□□□ 0.47
BRCA2-204ENST00000530893 TSPAN16Q9UKR8 245 aa18.01■□□□□ 0.47
BRCA2-204ENST00000530893 SLC45A1Q9Y2W3 748 aa18.01■□□□□ 0.47
BRCA2-204ENST00000530893 PLXNB2O15031 1838 aa18■□□□□ 0.47
BRCA2-204ENST00000530893 ATP2C2O75185 946 aa18■□□□□ 0.47
BRCA2-204ENST00000530893 PDGFRAP16234 1089 aa18■□□□□ 0.47
BRCA2-204ENST00000530893 ADORA2AP29274 412 aa18■□□□□ 0.47
BRCA2-204ENST00000530893 WDR4P57081 412 aaKnown RBP18■□□□□ 0.47
BRCA2-204ENST00000530893 GPX6P59796 221 aa18■□□□□ 0.47
BRCA2-204ENST00000530893 GALNTL6Q49A17 601 aa18■□□□□ 0.47
BRCA2-204ENST00000530893 BOLA3Q53S33 107 aa18■□□□□ 0.47
BRCA2-204ENST00000530893 LDLRAD1Q5T700 205 aa18■□□□□ 0.47
BRCA2-204ENST00000530893 RNF43Q68DV7 783 aa18■□□□□ 0.47
BRCA2-204ENST00000530893 PITPNM3Q9BZ71 974 aa18■□□□□ 0.47
BRCA2-204ENST00000530893 RXFP1Q9HBX9 757 aa18■□□□□ 0.47
BRCA2-204ENST00000530893 ABCF3Q9NUQ8 709 aa18■□□□□ 0.47
BRCA2-204ENST00000530893 KLHL14Q9P2G3 628 aa18■□□□□ 0.47
BRCA2-204ENST00000530893 STARD13Q9Y3M8 1113 aa18■□□□□ 0.47
BRCA2-204ENST00000530893 UNCXA6NJT0 531 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 DPYSL4O14531 572 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 PRPSAP2O60256 369 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 CDH6P55285 790 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 CDC42EP1Q00587 391 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 ROR1Q01973 937 aa17.99■□□□□ 0.47
BRCA2-204ENST00000530893 DPYSL3Q14195 570 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms