RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 CCDC195A0A1B0GUA6 201 aa14.74□□□□□ -0.05
PCF11-204ENST00000530660 MARCH6O60337 910 aa14.74□□□□□ -0.05
PCF11-204ENST00000530660 RFC4P35249 363 aa14.74□□□□□ -0.05
PCF11-204ENST00000530660 RPL26P61254 145 aaKnown RBP14.74□□□□□ -0.05
PCF11-204ENST00000530660 TFDP1Q14186 410 aa14.74□□□□□ -0.05
PCF11-204ENST00000530660 DENND5BQ6ZUT9 1274 aa14.74□□□□□ -0.05
PCF11-204ENST00000530660 SYDE1Q6ZW31 735 aaPredicted RBP14.74□□□□□ -0.05
PCF11-204ENST00000530660 VASH1Q7L8A9 365 aaPredicted RBP14.74□□□□□ -0.05
PCF11-204ENST00000530660 ZNF713Q8N859 430 aaPredicted RBP14.74□□□□□ -0.05
PCF11-204ENST00000530660 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.74□□□□□ -0.05
PCF11-204ENST00000530660 TSPAN14Q8NG11 270 aa14.74□□□□□ -0.05
PCF11-204ENST00000530660 COA7Q96BR5 231 aa14.74□□□□□ -0.05
PCF11-204ENST00000530660 CGREF1Q99674 301 aa14.74□□□□□ -0.05
PCF11-204ENST00000530660 FHDC1Q9C0D6 1143 aaPredicted RBP14.74□□□□□ -0.05
PCF11-204ENST00000530660 XPNPEP1Q9NQW7 623 aa14.74□□□□□ -0.05
PCF11-204ENST00000530660 SACM1LQ9NTJ5 587 aa14.74□□□□□ -0.05
PCF11-204ENST00000530660 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.74□□□□□ -0.05
PCF11-204ENST00000530660 J3QRK9 145 aa14.74□□□□□ -0.05
PCF11-204ENST00000530660 FAM182AQ5T1J6 154 aa14.74□□□□□ -0.05
PCF11-204ENST00000530660 C12orf60Q5U649 245 aa14.74□□□□□ -0.05
PCF11-204ENST00000530660 WDR75Q8IWA0 830 aaKnown RBP14.74□□□□□ -0.05
PCF11-204ENST00000530660 FBXL8Q96CD0 374 aa14.74□□□□□ -0.05
PCF11-204ENST00000530660 SIAEQ9HAT2 523 aa14.74□□□□□ -0.05
PCF11-204ENST00000530660 OLFML3Q9NRN5 406 aa14.74□□□□□ -0.05
PCF11-204ENST00000530660 NR2E3Q9Y5X4 410 aa14.74□□□□□ -0.05
PCF11-204ENST00000530660 ASTN1O14525 1302 aa14.74□□□□□ -0.05
PCF11-204ENST00000530660 TM9SF1O15321 606 aa14.74□□□□□ -0.05
PCF11-204ENST00000530660 TCEA1P23193 301 aaKnown RBP14.74□□□□□ -0.05
PCF11-204ENST00000530660 C21orf59P57076 290 aa14.74□□□□□ -0.05
PCF11-204ENST00000530660 CDH22Q9UJ99 828 aa14.74□□□□□ -0.05
PCF11-204ENST00000530660 TOGARAM1Q9Y4F4 1720 aa14.74□□□□□ -0.05
PCF11-204ENST00000530660 CCNT2O60583 730 aaKnown RBP14.73□□□□□ -0.05
PCF11-204ENST00000530660 TNNI2P48788 182 aa14.73□□□□□ -0.05
PCF11-204ENST00000530660 FMO5P49326 533 aa14.73□□□□□ -0.05
PCF11-204ENST00000530660 NUP107P57740 925 aa14.73□□□□□ -0.05
PCF11-204ENST00000530660 GPX6P59796 221 aa14.73□□□□□ -0.05
PCF11-204ENST00000530660 SEPT6Q14141 434 aa14.73□□□□□ -0.05
PCF11-204ENST00000530660 CES4AQ5XG92 561 aa14.73□□□□□ -0.05
PCF11-204ENST00000530660 EGFLAMQ63HQ2 1017 aa14.73□□□□□ -0.05
PCF11-204ENST00000530660 ZNF444Q8N0Y2 327 aaPredicted RBP14.73□□□□□ -0.05
PCF11-204ENST00000530660 TGFBRAP1Q8WUH2 860 aa14.73□□□□□ -0.05
PCF11-204ENST00000530660 ITPKCQ96DU7 683 aa14.73□□□□□ -0.05
PCF11-204ENST00000530660 PAFAH2Q99487 392 aa14.73□□□□□ -0.05
PCF11-204ENST00000530660 INTS2Q9H0H0 1204 aaKnown RBP14.73□□□□□ -0.05
PCF11-204ENST00000530660 ZFYVE28Q9HCC9 887 aa14.73□□□□□ -0.05
PCF11-204ENST00000530660 KCNK4Q9NYG8 393 aa14.73□□□□□ -0.05
PCF11-204ENST00000530660 TFCP2L1Q9NZI6 479 aa14.73□□□□□ -0.05
PCF11-204ENST00000530660 APEX2Q9UBZ4 518 aa14.73□□□□□ -0.05
PCF11-204ENST00000530660 A8MU76 341 aa14.73□□□□□ -0.05
PCF11-204ENST00000530660 RALAP11233 206 aa14.73□□□□□ -0.05
PCF11-204ENST00000530660 HOXA10P31260 410 aaPredicted RBP14.73□□□□□ -0.05
PCF11-204ENST00000530660 CTBSQ01459 385 aa14.73□□□□□ -0.05
PCF11-204ENST00000530660 CCNG2Q16589 344 aa14.73□□□□□ -0.05
PCF11-204ENST00000530660 PQLC1Q8N2U9 271 aa14.73□□□□□ -0.05
PCF11-204ENST00000530660 HGH1Q9BTY7 390 aa14.73□□□□□ -0.05
PCF11-204ENST00000530660 RUSC1Q9BVN2 902 aa14.73□□□□□ -0.05
PCF11-204ENST00000530660 CEP44Q9C0F1 390 aa14.73□□□□□ -0.05
PCF11-204ENST00000530660 C1orf21Q9H246 121 aa14.73□□□□□ -0.05
PCF11-204ENST00000530660 CALUO43852 315 aaPredicted RBP14.72□□□□□ -0.05
PCF11-204ENST00000530660 CNOT3O75175 753 aaKnown RBP14.72□□□□□ -0.05
PCF11-204ENST00000530660 GAD2Q05329 585 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 DCLRE1AQ6PJP8 1040 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 OGFOD1Q8N543 542 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 TMCO5AQ8N6Q1 288 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 ETNPPLQ8TBG4 499 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 HAS1Q92839 578 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 ATP2A3Q93084 1043 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 SLC24A2Q9UI40 661 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 RAB26Q9ULW5 256 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 SSX2IPQ9Y2D8 614 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 GTPBP10A4D1E9 387 aaKnown RBP14.72□□□□□ -0.05
PCF11-204ENST00000530660 ZNF12P17014 697 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 ZNF23P17027 643 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 ADSSP30520 456 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 HOXA7P31268 230 aaPredicted RBP14.72□□□□□ -0.05
PCF11-204ENST00000530660 ETV4P43268 484 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 CDH15P55291 814 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 ALCAMQ13740 583 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 USP41Q3LFD5 358 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 SPOPLQ6IQ16 392 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 CLVS1Q8IUQ0 354 aaPredicted RBP14.72□□□□□ -0.05
PCF11-204ENST00000530660 HELQQ8TDG4 1101 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 HERC5Q9UII4 1024 aaKnown RBP14.72□□□□□ -0.05
PCF11-204ENST00000530660 RABGEF1Q9UJ41 708 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 SF3B1O75533 1304 aaKnown RBP eCLIP14.72□□□□□ -0.051e-6■■■■■ 72.6
PCF11-204ENST00000530660 MEIS1O00470 390 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 ZMPSTE24O75844 475 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 MAN1A1P33908 653 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 NDST2P52849 883 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 SF3B4Q15427 424 aaKnown RBP eCLIP14.72□□□□□ -0.05
PCF11-204ENST00000530660 POTEGQ6S5H5 508 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 KBTBD6Q86V97 674 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 BBOF1Q8ND07 529 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 MZB1Q8WU39 189 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 SERAC1Q96JX3 654 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 KLC2Q9H0B6 622 aa14.72□□□□□ -0.05
PCF11-204ENST00000530660 LAMB1P07942 1786 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 F5H6K3 240 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 PDXKO00764 312 aa14.71□□□□□ -0.05
PCF11-204ENST00000530660 KLRC2P26717 231 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms