RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 ZNF552Q9H707 407 aaPredicted RBP7.96□□□□□ -1.14
SVIP-204ENST00000530199 SAP30BPQ9UHR5 308 aaKnown RBP7.96□□□□□ -1.14
SVIP-204ENST00000530199 ANGPTL2Q9UKU9 493 aa7.96□□□□□ -1.14
SVIP-204ENST00000530199 CDY2AQ9Y6F7 541 aa7.96□□□□□ -1.14
SVIP-204ENST00000530199 BPTFQ12830 3046 aa7.96□□□□□ -1.14
SVIP-204ENST00000530199 VWA5AO00534 786 aa7.95□□□□□ -1.14
SVIP-204ENST00000530199 TPD52L2O43399 206 aaKnown RBP7.95□□□□□ -1.14
SVIP-204ENST00000530199 ADAM23O75077 832 aa7.95□□□□□ -1.14
SVIP-204ENST00000530199 NCAM1P13591 858 aa7.95□□□□□ -1.14
SVIP-204ENST00000530199 TRIM27P14373 513 aa7.95□□□□□ -1.14
SVIP-204ENST00000530199 RFX5P48382 616 aaPredicted RBP7.95□□□□□ -1.14
SVIP-204ENST00000530199 CDK17Q00537 523 aa7.95□□□□□ -1.14
SVIP-204ENST00000530199 PURAQ00577 322 aaKnown RBP7.95□□□□□ -1.14
SVIP-204ENST00000530199 PPARAQ07869 468 aa7.95□□□□□ -1.14
SVIP-204ENST00000530199 HDAC1Q13547 482 aaPredicted RBP7.95□□□□□ -1.14
SVIP-204ENST00000530199 TCTN1Q2MV58 587 aa7.95□□□□□ -1.14
SVIP-204ENST00000530199 KIAA1755Q5JYT7 1200 aa7.95□□□□□ -1.14
SVIP-204ENST00000530199 ZMYM1Q5SVZ6 1142 aa7.95□□□□□ -1.14
SVIP-204ENST00000530199 SUMF1Q8NBK3 374 aa7.95□□□□□ -1.14
SVIP-204ENST00000530199 HPS3Q969F9 1004 aa7.95□□□□□ -1.14
SVIP-204ENST00000530199 BORCS6Q96GS4 357 aa7.95□□□□□ -1.14
SVIP-204ENST00000530199 RTP3Q9BQQ7 232 aa7.95□□□□□ -1.14
SVIP-204ENST00000530199 SARGQ9BW04 601 aa7.95□□□□□ -1.14
SVIP-204ENST00000530199 ACE2Q9BYF1 805 aaPredicted RBP7.95□□□□□ -1.14
SVIP-204ENST00000530199 RNF38Q9H0F5 515 aa7.95□□□□□ -1.14
SVIP-204ENST00000530199 DLL4Q9NR61 685 aa7.95□□□□□ -1.14
SVIP-204ENST00000530199 CHST12Q9NRB3 414 aa7.95□□□□□ -1.14
SVIP-204ENST00000530199 FTSJ1Q9UET6 329 aa7.95□□□□□ -1.14
SVIP-204ENST00000530199 USP18Q9UMW8 372 aa7.95□□□□□ -1.14
SVIP-204ENST00000530199 PCDHB6Q9Y5E3 794 aa7.95□□□□□ -1.14
SVIP-204ENST00000530199 R4GN57 208 aa7.95□□□□□ -1.14
SVIP-204ENST00000530199 MCM3APO60318 1980 aa7.95□□□□□ -1.14
SVIP-204ENST00000530199 SCN10AQ9Y5Y9 1956 aa7.95□□□□□ -1.14
SVIP-204ENST00000530199 FANCMQ8IYD8 2048 aa7.95□□□□□ -1.14
SVIP-204ENST00000530199 A0A0A6YYJ9 748 aa7.94□□□□□ -1.14
SVIP-204ENST00000530199 WDR46O15213 610 aaKnown RBP7.94□□□□□ -1.14
SVIP-204ENST00000530199 GRM6O15303 877 aa7.94□□□□□ -1.14
SVIP-204ENST00000530199 MAFGO15525 162 aa7.94□□□□□ -1.14
SVIP-204ENST00000530199 NBNO60934 754 aa7.94□□□□□ -1.14
SVIP-204ENST00000530199 CIAO1O76071 339 aa7.94□□□□□ -1.14
SVIP-204ENST00000530199 MMP1P03956 469 aa7.94□□□□□ -1.14
SVIP-204ENST00000530199 AMHP03971 560 aa7.94□□□□□ -1.14
SVIP-204ENST00000530199 BIRC2Q13490 618 aa7.94□□□□□ -1.14
SVIP-204ENST00000530199 STILQ15468 1287 aa7.94□□□□□ -1.14
SVIP-204ENST00000530199 KCNMB1Q16558 191 aa7.94□□□□□ -1.14
SVIP-204ENST00000530199 UAP1L1Q3KQV9 507 aa7.94□□□□□ -1.14
SVIP-204ENST00000530199 SYCP2LQ5T4T6 812 aa7.94□□□□□ -1.14
SVIP-204ENST00000530199 LRRC8DQ7L1W4 858 aa7.94□□□□□ -1.14
SVIP-204ENST00000530199 ZSWIM9Q86XI8 627 aa7.94□□□□□ -1.14
SVIP-204ENST00000530199 GAB3Q8WWW8 586 aa7.94□□□□□ -1.14
SVIP-204ENST00000530199 PPP2R3CQ969Q6 453 aa7.94□□□□□ -1.14
SVIP-204ENST00000530199 SLC39A13Q96H72 371 aa7.94□□□□□ -1.14
SVIP-204ENST00000530199 RPS6KC1Q96S38 1066 aa7.94□□□□□ -1.14
SVIP-204ENST00000530199 NOL10Q9BSC4 688 aaKnown RBP7.94□□□□□ -1.14
SVIP-204ENST00000530199 C11orf84Q9BUA3 381 aaPredicted RBP7.94□□□□□ -1.14
SVIP-204ENST00000530199 TEX13BQ9BXU2 312 aa7.94□□□□□ -1.14
SVIP-204ENST00000530199 MFSD1Q9H3U5 465 aa7.94□□□□□ -1.14
SVIP-204ENST00000530199 C1orf112Q9NSG2 853 aa7.94□□□□□ -1.14
SVIP-204ENST00000530199 AATFQ9NY61 560 aaKnown RBP eCLIP7.94□□□□□ -1.14
SVIP-204ENST00000530199 KCMF1Q9P0J7 381 aa7.94□□□□□ -1.14
SVIP-204ENST00000530199 MICAL3Q7RTP6 2002 aa7.94□□□□□ -1.14
SVIP-204ENST00000530199 FRMPD2Q68DX3 1309 aaPredicted RBP7.94□□□□□ -1.14
SVIP-204ENST00000530199 NLRC5Q86WI3 1866 aa7.94□□□□□ -1.14
SVIP-204ENST00000530199 ATP2A1O14983 1001 aa7.93□□□□□ -1.14
SVIP-204ENST00000530199 PI15O43692 258 aa7.93□□□□□ -1.14
SVIP-204ENST00000530199 LINC00271P0C7V0 271 aa7.93□□□□□ -1.14
SVIP-204ENST00000530199 PDCP20941 246 aa7.93□□□□□ -1.14
SVIP-204ENST00000530199 GPR15P49685 360 aa7.93□□□□□ -1.14
SVIP-204ENST00000530199 SLC16A1P53985 500 aa7.93□□□□□ -1.14
SVIP-204ENST00000530199 CCT2P78371 535 aaKnown RBP7.93□□□□□ -1.14
SVIP-204ENST00000530199 NFATC3Q12968 1075 aa7.93□□□□□ -1.14
SVIP-204ENST00000530199 SEPT2Q15019 361 aa7.93□□□□□ -1.14
SVIP-204ENST00000530199 KANK2Q63ZY3 851 aa7.93□□□□□ -1.14
SVIP-204ENST00000530199 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.93□□□□□ -1.14
SVIP-204ENST00000530199 USP45Q70EL2 814 aa7.93□□□□□ -1.14
SVIP-204ENST00000530199 CDYL2Q8N8U2 506 aa7.93□□□□□ -1.14
SVIP-204ENST00000530199 WDR48Q8TAF3 677 aa7.93□□□□□ -1.14
SVIP-204ENST00000530199 TMEM209Q96SK2 561 aa7.93□□□□□ -1.14
SVIP-204ENST00000530199 MTG1Q9BT17 334 aaPredicted RBP7.93□□□□□ -1.14
SVIP-204ENST00000530199 ZNF700Q9H0M5 742 aa7.93□□□□□ -1.14
SVIP-204ENST00000530199 VCPKMTQ9H867 229 aa7.93□□□□□ -1.14
SVIP-204ENST00000530199 ARHGAP20Q9P2F6 1191 aa7.93□□□□□ -1.14
SVIP-204ENST00000530199 EVLQ9UI08 416 aaPredicted RBP7.93□□□□□ -1.14
SVIP-204ENST00000530199 TMX2Q9Y320 296 aa7.93□□□□□ -1.14
SVIP-204ENST00000530199 HELZ2Q9BYK8 2649 aaKnown RBP7.92□□□□□ -1.14
SVIP-204ENST00000530199 CEP295Q9C0D2 2601 aa7.92□□□□□ -1.14
SVIP-204ENST00000530199 TRIP12Q14669 1992 aaPredicted RBP7.92□□□□□ -1.14
SVIP-204ENST00000530199 MAFO75444 373 aaPredicted RBP7.92□□□□□ -1.14
SVIP-204ENST00000530199 GLP2RO95838 553 aa7.92□□□□□ -1.14
SVIP-204ENST00000530199 IL18BPO95998 194 aa7.92□□□□□ -1.14
SVIP-204ENST00000530199 ADORA1P30542 326 aa7.92□□□□□ -1.14
SVIP-204ENST00000530199 SHMT1P34896 483 aa7.92□□□□□ -1.14
SVIP-204ENST00000530199 BMPR1AP36894 532 aa7.92□□□□□ -1.14
SVIP-204ENST00000530199 MC3RP41968 323 aa7.92□□□□□ -1.14
SVIP-204ENST00000530199 IL13RA1P78552 427 aa7.92□□□□□ -1.14
SVIP-204ENST00000530199 MALLQ13021 153 aa7.92□□□□□ -1.14
SVIP-204ENST00000530199 CAMK1Q14012 370 aa7.92□□□□□ -1.14
SVIP-204ENST00000530199 GALEQ14376 348 aa7.92□□□□□ -1.14
SVIP-204ENST00000530199 ADRM1Q16186 407 aa7.92□□□□□ -1.14
SVIP-204ENST00000530199 CCDC178Q5BJE1 867 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms