RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 DSEQ9UL01 958 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 POLIQ9UNA4 740 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 CTNND2Q9UQB3 1225 aa6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 R3HCC1Q9Y3T6 440 aaKnown RBP6.7□□□□□ -1.34
ATPAF1-209ENST00000529214 TMCO5BA8MYB1 307 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 H3BQ06 376 aaPredicted RBP6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 GABRDO14764 452 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 HUS1O60921 280 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 PHACTR2O75167 634 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 TBX10O75333 385 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 VNN1O95497 513 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 FGFR1OPO95684 399 aaKnown RBP6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 GNA14O95837 355 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 SPATA31D3P0C874 917 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 ODC1P11926 461 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 KCNA5P22460 613 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 GTF2H1P32780 548 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 NOS2P35228 1153 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 NOP2P46087 812 aaKnown RBP6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 GCLMP48507 274 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 ST13P50502 369 aaKnown RBP6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 MYL6P60660 151 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 MRPS5P82675 430 aaKnown RBP6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 KCNC4Q03721 635 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 TRPC3Q13507 836 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 AAK1Q2M2I8 961 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 SOWAHAQ2M3V2 549 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 SGSM1Q2NKQ1 1148 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 KLHL40Q2TBA0 621 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 DPCR1Q3MIW9 517 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 WDR72Q3MJ13 1102 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 LEXMQ3ZCV2 418 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 CTXN3Q4LDR2 81 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 CCDC183Q5T5S1 534 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 MEI1Q5TIA1 1274 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 WSCD1Q658N2 575 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 OVOS1Q6IE37 1185 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 LLGL2Q6P1M3 1020 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 SYCE2Q6PIF2 218 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 SPATA31D4Q6ZUB0 917 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 LIMS2Q7Z4I7 341 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 LCA5Q86VQ0 697 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 ATCAYQ86WG3 371 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 METTL23Q86XA0 190 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 RAVER1Q8IY67 606 aaKnown RBP6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 THEM5Q8N1Q8 247 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 TMEM86AQ8N2M4 240 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 SYAP1Q96A49 352 aaPredicted RBP6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 SPON2Q9BUD6 331 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 XYLT2Q9H1B5 865 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 S1PR5Q9H228 398 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 PLEKHA4Q9H4M7 779 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 TMEM8AQ9HCN3 771 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 THEGQ9P2T0 379 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 ARMCX3Q9UH62 379 aaPredicted RBP6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 DPP7Q9UHL4 492 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 DACH1Q9UI36 760 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 BARX2Q9UMQ3 279 aaPredicted RBP6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 PCDHB11Q9Y5F2 797 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 SNX9Q9Y5X1 595 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 CDY1Q9Y6F8 540 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 ANK1P16157 1881 aa6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 PDCD11Q14690 1871 aaKnown RBP6.69□□□□□ -1.34
ATPAF1-209ENST00000529214 WDR27A2RRH5 827 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 PABPN1LA6NDY0 278 aaKnown RBP6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 OR6C75A6NL08 312 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 NRG2O14511 850 aaPredicted RBP6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 DYNC1I1O14576 645 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 EIF1AYO14602 144 aaKnown RBP6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 STX10O60499 249 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 PAPLNO95428 1278 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 GLUD1P00367 558 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 TRIM49P0CI25 452 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 TRIM49CP0CI26 452 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 SRGAP2BP0DMP2 458 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 BMP1P13497 986 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 ATF2P15336 505 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 LHX1P48742 406 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 ROR1Q01973 937 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 WASHC5Q12768 1159 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 GPR17Q13304 367 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 BIRC3Q13489 604 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 COX20Q5RI15 118 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 TPGS2Q68CL5 300 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 KRT39Q6A163 491 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 CAVIN1Q6NZI2 390 aaKnown RBP6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 SASS6Q6UVJ0 657 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 ZNF771Q7L3S4 317 aaPredicted RBP6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 RTL10Q7L3V2 364 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 IRF2BP1Q8IU81 584 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 LILRB2Q8N423 598 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 PDCL2Q8N4E4 241 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 TOP6BLQ8N6T0 577 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 SMRP1Q8NCR6 262 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 KREMEN2Q8NCW0 462 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 ANKK1Q8NFD2 765 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 SPATA18Q8TC71 538 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 SLC35C1Q96A29 364 aa6.68□□□□□ -1.34
ATPAF1-209ENST00000529214 MPP4Q96JB8 637 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms