RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 SMYD3Q9H7B4 428 aa12.84□□□□□ -0.35
COPB1-206ENST00000529210 TMEM30AQ9NV96 361 aa12.84□□□□□ -0.35
COPB1-206ENST00000529210 IL37Q9NZH6 218 aa12.84□□□□□ -0.35
COPB1-206ENST00000529210 CCL26Q9Y258 94 aa12.84□□□□□ -0.35
COPB1-206ENST00000529210 CFAP54Q96N23 3096 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 TRAV19A0A0A6YYK7 116 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 FAM92AA1XBS5 289 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 GOLGA6L4A6NEF3 574 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 F8VP50 259 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 SPECC1L-ADORA2AF8WAN1 911 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 PAPSS2O95340 614 aaPredicted RBP12.83□□□□□ -0.36
COPB1-206ENST00000529210 HLA-DRAP01903 254 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 USP17L7P0C7H9 530 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 TDGF1P13385 188 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 CCNE1P24864 410 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 ANXA13P27216 316 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 CDH8P55286 799 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 INCA1Q0VD86 236 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 PNOCQ13519 176 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 ITPRIPL2Q3MIP1 535 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 DGKKQ5KSL6 1271 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 PAQR9Q6ZVX9 377 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 SYNPOQ8N3V7 929 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 ZBTB44Q8NCP5 570 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 RIN3Q8TB24 985 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 ZFYVE19Q96K21 471 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 B3GNT5Q9BYG0 378 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 ZNF518BQ9C0D4 1074 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 SDCBP2Q9H190 292 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 CYP3A43Q9HB55 503 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 TMEM8AQ9HCN3 771 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 HPS4Q9NQG7 708 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 SPATA6Q9NWH7 488 aaPredicted RBP12.83□□□□□ -0.36
COPB1-206ENST00000529210 COMMD8Q9NX08 183 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 GTSE1Q9NYZ3 720 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 CIZ1Q9ULV3 898 aaPredicted RBP12.83□□□□□ -0.36
COPB1-206ENST00000529210 ARHGAP26Q9UNA1 814 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 MAPK8IP1Q9UQF2 711 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 PCDHGA2Q9Y5H1 932 aa12.83□□□□□ -0.36
COPB1-206ENST00000529210 ZNF292O60281 2723 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 ZNF840PA6NDX5 716 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 TNFRSF10BO14763 440 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 RTN3O95197 1032 aaPredicted RBP12.82□□□□□ -0.36
COPB1-206ENST00000529210 SMC2O95347 1197 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 KRT13P13646 458 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 ASPAP45381 313 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 KPNA1P52294 538 aaPredicted RBP12.82□□□□□ -0.36
COPB1-206ENST00000529210 CACNA2D1P54289 1103 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 USP46P62068 366 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 SLC7A9P82251 487 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 PPP3CAQ08209 521 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 MTAPQ13126 283 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 RUNX3Q13761 415 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 CCINQ13939 588 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 LRRC32Q14392 662 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 PDGFRLQ15198 375 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 WDR44Q5JSH3 913 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 SNX30Q5VWJ9 437 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 FOXR2Q6PJQ5 311 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 TXNDC11Q6PKC3 985 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 OSCP1Q8WVF1 389 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 SLC22A12Q96S37 553 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 SMG9Q9H0W8 520 aaKnown RBP12.82□□□□□ -0.36
COPB1-206ENST00000529210 LMAN1LQ9HAT1 526 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 CSNK1G1Q9HCP0 422 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 GKN1Q9NS71 199 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 TRPM5Q9NZQ8 1165 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 HOOK1Q9UJC3 728 aaKnown RBP12.82□□□□□ -0.36
COPB1-206ENST00000529210 NDRG2Q9UN36 371 aaKnown RBP12.82□□□□□ -0.36
COPB1-206ENST00000529210 PCDHA5Q9Y5H7 936 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 GVINP1Q7Z2Y8 2422 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 ATP8B3O60423 1300 aa12.82□□□□□ -0.36
COPB1-206ENST00000529210 C2orf78A6NCI8 922 aa12.81□□□□□ -0.36
COPB1-206ENST00000529210 TRDMT1O14717 391 aaKnown RBP12.81□□□□□ -0.36
COPB1-206ENST00000529210 CETN3O15182 167 aa12.81□□□□□ -0.36
COPB1-206ENST00000529210 SLC16A3O15427 465 aaKnown RBP12.81□□□□□ -0.36
COPB1-206ENST00000529210 LILRB5O75023 590 aa12.81□□□□□ -0.36
COPB1-206ENST00000529210 OAS1P00973 400 aaKnown RBP12.81□□□□□ -0.36
COPB1-206ENST00000529210 LMNAP02545 664 aaKnown RBP12.81□□□□□ -0.36
COPB1-206ENST00000529210 PIK3CAP42336 1068 aa12.81□□□□□ -0.36
COPB1-206ENST00000529210 PRCPP42785 496 aa12.81□□□□□ -0.36
COPB1-206ENST00000529210 CCR3P51677 355 aa12.81□□□□□ -0.36
COPB1-206ENST00000529210 NDST1P52848 882 aa12.81□□□□□ -0.36
COPB1-206ENST00000529210 FKBP3Q00688 224 aaKnown RBP12.81□□□□□ -0.36
COPB1-206ENST00000529210 AMPD2Q01433 879 aa12.81□□□□□ -0.36
COPB1-206ENST00000529210 LRRC63Q05C16 580 aa12.81□□□□□ -0.36
COPB1-206ENST00000529210 TNK2Q07912 1038 aa12.81□□□□□ -0.36
COPB1-206ENST00000529210 MTF1Q14872 753 aa12.81□□□□□ -0.36
COPB1-206ENST00000529210 KRT39Q6A163 491 aa12.81□□□□□ -0.36
COPB1-206ENST00000529210 FAM35AQ86V20 835 aa12.81□□□□□ -0.36
COPB1-206ENST00000529210 GPIHBP1Q8IV16 184 aa12.81□□□□□ -0.36
COPB1-206ENST00000529210 SMYD4Q8IYR2 804 aaPredicted RBP12.81□□□□□ -0.36
COPB1-206ENST00000529210 FUKQ8N0W3 1084 aa12.81□□□□□ -0.36
COPB1-206ENST00000529210 NUP93Q8N1F7 819 aa12.81□□□□□ -0.36
COPB1-206ENST00000529210 SPEM1Q8N4L4 309 aa12.81□□□□□ -0.36
COPB1-206ENST00000529210 PDZD8Q8NEN9 1154 aa12.81□□□□□ -0.36
COPB1-206ENST00000529210 TAS1R2Q8TE23 839 aa12.81□□□□□ -0.36
COPB1-206ENST00000529210 CHFRQ96EP1 664 aa12.81□□□□□ -0.36
COPB1-206ENST00000529210 SMARCD1Q96GM5 515 aa12.81□□□□□ -0.36
COPB1-206ENST00000529210 SLITRK1Q96PX8 696 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms