RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 TRIM66O15016 1216 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 TRIM16O95361 564 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 GCNT3O95395 438 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 ADH1CP00326 375 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 ABL1P00519 1130 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 SPINK2P20155 84 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 HOXD12P35452 270 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 DDIT3P35638 169 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 EIF2DP41214 584 aaKnown RBP12.36□□□□□ -0.43
CMTM1-211ENST00000528484 IRX4P78413 519 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 CYP27A1Q02318 531 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 RESTQ13127 1097 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 ALCAMQ13740 583 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 COL9A2Q14055 689 aaPredicted RBP12.36□□□□□ -0.43
CMTM1-211ENST00000528484 SPDYCQ5MJ68 293 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 CRELD2Q6UXH1 353 aaPredicted RBP12.36□□□□□ -0.43
CMTM1-211ENST00000528484 DPH6Q7L8W6 267 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 DYMQ7RTS9 669 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 TRMT11Q7Z4G4 463 aaKnown RBP12.36□□□□□ -0.43
CMTM1-211ENST00000528484 RABEPKQ7Z6M1 372 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 SFR1Q86XK3 245 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 DDX42Q86XP3 938 aaKnown RBP eCLIP12.36□□□□□ -0.43
CMTM1-211ENST00000528484 C1orf127Q8N9H9 656 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 SPATA17Q96L03 361 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 SLC22A12Q96S37 553 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 FIZ1Q96SL8 496 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 PNKPQ96T60 521 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 GCNT4Q9P109 453 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 CDH9Q9ULB4 789 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 NEUROG3Q9Y4Z2 214 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 KIAA1549LQ6ZVL6 1849 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 DMXL2Q8TDJ6 3036 aa12.36□□□□□ -0.43
CMTM1-211ENST00000528484 K7EQS6 105 aa12.35□□□□□ -0.43
CMTM1-211ENST00000528484 LEFTY2O00292 366 aa12.35□□□□□ -0.43
CMTM1-211ENST00000528484 CDX4O14627 284 aaPredicted RBP12.35□□□□□ -0.43
CMTM1-211ENST00000528484 TNNC2P02585 160 aa12.35□□□□□ -0.43
CMTM1-211ENST00000528484 CFIP05156 583 aa12.35□□□□□ -0.43
CMTM1-211ENST00000528484 BCKDHBP21953 392 aa12.35□□□□□ -0.43
CMTM1-211ENST00000528484 GARTP22102 1010 aa12.35□□□□□ -0.43
CMTM1-211ENST00000528484 GJB2P29033 226 aa12.35□□□□□ -0.43
CMTM1-211ENST00000528484 TIE1P35590 1138 aa12.35□□□□□ -0.43
CMTM1-211ENST00000528484 ACAP1Q15027 740 aa12.35□□□□□ -0.43
CMTM1-211ENST00000528484 SURF1Q15526 300 aa12.35□□□□□ -0.43
CMTM1-211ENST00000528484 L1TD1Q5T7N2 865 aaKnown RBP12.35□□□□□ -0.43
CMTM1-211ENST00000528484 LYSMD4Q5XG99 296 aa12.35□□□□□ -0.43
CMTM1-211ENST00000528484 BTBD8Q5XKL5 378 aa12.35□□□□□ -0.43
CMTM1-211ENST00000528484 KIAA1211LQ6NV74 962 aa12.35□□□□□ -0.43
CMTM1-211ENST00000528484 ARMCX6Q7L4S7 300 aa12.35□□□□□ -0.43
CMTM1-211ENST00000528484 FILIP1Q7Z7B0 1213 aa12.35□□□□□ -0.43
CMTM1-211ENST00000528484 TXNDC5Q8NBS9 432 aaKnown RBP12.35□□□□□ -0.43
CMTM1-211ENST00000528484 CEP76Q8TAP6 659 aa12.35□□□□□ -0.43
CMTM1-211ENST00000528484 EZH1Q92800 747 aaPredicted RBP12.35□□□□□ -0.43
CMTM1-211ENST00000528484 MYLPFQ96A32 169 aa12.35□□□□□ -0.43
CMTM1-211ENST00000528484 SAAL1Q96ER3 474 aa12.35□□□□□ -0.43
CMTM1-211ENST00000528484 SLITRK1Q96PX8 696 aa12.35□□□□□ -0.43
CMTM1-211ENST00000528484 SYT15Q9BQS2 421 aa12.35□□□□□ -0.43
CMTM1-211ENST00000528484 LINC00597Q9H2U6 94 aa12.35□□□□□ -0.43
CMTM1-211ENST00000528484 STK17AQ9UEE5 414 aa12.35□□□□□ -0.43
CMTM1-211ENST00000528484 HELZP42694 1942 aaKnown RBP12.35□□□□□ -0.43
CMTM1-211ENST00000528484 FREM2Q5SZK8 3169 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 DSPP15924 2871 aaKnown RBP12.34□□□□□ -0.43
CMTM1-211ENST00000528484 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 GABRDO14764 452 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 KIAA0391O15091 583 aaKnown RBP12.34□□□□□ -0.43
CMTM1-211ENST00000528484 AP5Z1O43299 807 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 KAT7O95251 611 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 SEC24BO95487 1268 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 KLF8O95600 359 aaPredicted RBP12.34□□□□□ -0.43
CMTM1-211ENST00000528484 ENGP17813 658 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 BDNFP23560 247 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 ADSSP30520 456 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 OPRD1P41143 372 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 P2RY2P41231 377 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 GRIA2P42262 883 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 SIM1P81133 766 aaPredicted RBP12.34□□□□□ -0.43
CMTM1-211ENST00000528484 TDRD10Q5VZ19 366 aaKnown RBP12.34□□□□□ -0.43
CMTM1-211ENST00000528484 SLC36A4Q6YBV0 504 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 STXBP4Q6ZWJ1 553 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 SV2BQ7L1I2 683 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 BRAPQ7Z569 592 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 TMEFF1Q8IYR6 380 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 ALLCQ8N6M5 410 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 HMGB4Q8WW32 186 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 MMS19Q96T76 1030 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 PKMYT1Q99640 499 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 MTMR12Q9C0I1 747 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 ARHGEF4Q9NR80 690 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 PPP4R2Q9NY27 417 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 TBC1D14Q9P2M4 693 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 SMC3Q9UQE7 1217 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 CPQQ9Y646 472 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 ANAPC1Q9H1A4 1944 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 ASCC3Q8N3C0 2202 aaKnown RBP12.34□□□□□ -0.43
CMTM1-211ENST00000528484 ZFYVE26Q68DK2 2539 aa12.34□□□□□ -0.43
CMTM1-211ENST00000528484 SRRM3A6NNA2 597 aaPredicted RBP12.33□□□□□ -0.44
CMTM1-211ENST00000528484 OPHN1O60890 802 aa12.33□□□□□ -0.44
CMTM1-211ENST00000528484 PRPF6O94906 941 aaKnown RBP12.33□□□□□ -0.44
CMTM1-211ENST00000528484 CYP17A1P05093 508 aa12.33□□□□□ -0.44
CMTM1-211ENST00000528484 ADH5P11766 374 aa12.33□□□□□ -0.44
CMTM1-211ENST00000528484 IDEP14735 1019 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms