RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 KIAA0391O15091 583 aaKnown RBP25.19■■□□□ 1.62
CPSF1-202ENST00000527827 NFATC1O95644 943 aa25.19■■□□□ 1.62
CPSF1-202ENST00000527827 CAVIN2O95810 425 aa25.19■■□□□ 1.62
CPSF1-202ENST00000527827 TNNC2P02585 160 aa25.19■■□□□ 1.62
CPSF1-202ENST00000527827 PDGFRBP09619 1106 aa25.19■■□□□ 1.62
CPSF1-202ENST00000527827 PDCP20941 246 aa25.19■■□□□ 1.62
CPSF1-202ENST00000527827 WARSP23381 471 aaKnown RBP25.19■■□□□ 1.62
CPSF1-202ENST00000527827 GRIK1P39086 918 aa25.19■■□□□ 1.62
CPSF1-202ENST00000527827 DENND5BQ6ZUT9 1274 aa25.19■■□□□ 1.62
CPSF1-202ENST00000527827 TSTD1Q8NFU3 115 aa25.19■■□□□ 1.62
CPSF1-202ENST00000527827 CEP295NLQ96MC4 621 aa25.19■■□□□ 1.62
CPSF1-202ENST00000527827 EDEM2Q9BV94 578 aa25.19■■□□□ 1.62
CPSF1-202ENST00000527827 R3HCC1Q9Y3T6 440 aaKnown RBP25.19■■□□□ 1.62
CPSF1-202ENST00000527827 MORC2Q9Y6X9 1032 aaPredicted RBP25.19■■□□□ 1.62
CPSF1-202ENST00000527827 MYOFQ9NZM1 2061 aa25.18■■□□□ 1.62
CPSF1-202ENST00000527827 ZNF233A6NK53 670 aa25.18■■□□□ 1.62
CPSF1-202ENST00000527827 LEFTY2O00292 366 aa25.18■■□□□ 1.62
CPSF1-202ENST00000527827 PFKLP17858 780 aa25.18■■□□□ 1.62
CPSF1-202ENST00000527827 HOXD13P35453 343 aa25.18■■□□□ 1.62
CPSF1-202ENST00000527827 PDE6CP51160 858 aa25.18■■□□□ 1.62
CPSF1-202ENST00000527827 SURF1Q15526 300 aa25.18■■□□□ 1.62
CPSF1-202ENST00000527827 MAPRE1Q15691 268 aaKnown RBP25.18■■□□□ 1.62
CPSF1-202ENST00000527827 DUOXA2Q1HG44 320 aa25.18■■□□□ 1.62
CPSF1-202ENST00000527827 RASSF3Q86WH2 238 aa25.18■■□□□ 1.62
CPSF1-202ENST00000527827 CCDC65Q8IXS2 484 aa25.18■■□□□ 1.62
CPSF1-202ENST00000527827 CCDC26Q8TAB7 109 aa25.18■■□□□ 1.62
CPSF1-202ENST00000527827 HPS3Q969F9 1004 aa25.18■■□□□ 1.62
CPSF1-202ENST00000527827 PCED1BQ96HM7 432 aa25.18■■□□□ 1.62
CPSF1-202ENST00000527827 USP28Q96RU2 1077 aa25.18■■□□□ 1.62
CPSF1-202ENST00000527827 TTLL2Q9BWV7 592 aa25.18■■□□□ 1.62
CPSF1-202ENST00000527827 TPSD1Q9BZJ3 242 aa25.18■■□□□ 1.62
CPSF1-202ENST00000527827 TRPM5Q9NZQ8 1165 aa25.18■■□□□ 1.62
CPSF1-202ENST00000527827 NME7Q9Y5B8 376 aa25.18■■□□□ 1.62
CPSF1-202ENST00000527827 CEP295Q9C0D2 2601 aa25.18■■□□□ 1.62
CPSF1-202ENST00000527827 ZFHX4Q86UP3 3567 aa25.18■■□□□ 1.62
CPSF1-202ENST00000527827 SYT1P21579 422 aa25.17■■□□□ 1.62
CPSF1-202ENST00000527827 GBP1P32455 592 aa25.17■■□□□ 1.62
CPSF1-202ENST00000527827 SEC13P55735 322 aa25.17■■□□□ 1.62
CPSF1-202ENST00000527827 CYP27A1Q02318 531 aa25.17■■□□□ 1.62
CPSF1-202ENST00000527827 SLC39A14Q15043 492 aa25.17■■□□□ 1.62
CPSF1-202ENST00000527827 C2orf27AQ580R0 203 aa25.17■■□□□ 1.62
CPSF1-202ENST00000527827 PMS2CLQ68D20 193 aa25.17■■□□□ 1.62
CPSF1-202ENST00000527827 MYCBPAPQ8TBZ2 947 aa25.17■■□□□ 1.62
CPSF1-202ENST00000527827 RNF38Q9H0F5 515 aa25.17■■□□□ 1.62
CPSF1-202ENST00000527827 CFAP47Q6ZTR5 3102 aa25.16■■□□□ 1.62
CPSF1-202ENST00000527827 ZNF840PA6NDX5 716 aa25.16■■□□□ 1.62
CPSF1-202ENST00000527827 CYP17A1P05093 508 aa25.16■■□□□ 1.62
CPSF1-202ENST00000527827 ANXA13P27216 316 aa25.16■■□□□ 1.62
CPSF1-202ENST00000527827 SLC7A9P82251 487 aa25.16■■□□□ 1.62
CPSF1-202ENST00000527827 USP39Q53GS9 565 aaKnown RBP25.16■■□□□ 1.62
CPSF1-202ENST00000527827 FILIP1Q7Z7B0 1213 aa25.16■■□□□ 1.62
CPSF1-202ENST00000527827 WDR49Q8IV35 697 aa25.16■■□□□ 1.62
CPSF1-202ENST00000527827 PDILTQ8N807 584 aa25.16■■□□□ 1.62
CPSF1-202ENST00000527827 MMS19Q96T76 1030 aa25.16■■□□□ 1.62
CPSF1-202ENST00000527827 MRPL45Q9BRJ2 306 aaKnown RBP25.16■■□□□ 1.62
CPSF1-202ENST00000527827 HSPBP1Q9NZL4 362 aa25.16■■□□□ 1.62
CPSF1-202ENST00000527827 CHD6Q8TD26 2715 aa25.16■■□□□ 1.62
CPSF1-202ENST00000527827 LNP1A1A4G5 178 aa25.15■■□□□ 1.62
CPSF1-202ENST00000527827 C4orf47A7E2U8 309 aa25.15■■□□□ 1.62
CPSF1-202ENST00000527827 F8VP50 259 aa25.15■■□□□ 1.62
CPSF1-202ENST00000527827 TRIM66O15016 1216 aa25.15■■□□□ 1.62
CPSF1-202ENST00000527827 OLFM2O95897 454 aa25.15■■□□□ 1.62
CPSF1-202ENST00000527827 CHRM1P11229 460 aaPredicted RBP25.15■■□□□ 1.62
CPSF1-202ENST00000527827 BCKDHBP21953 392 aa25.15■■□□□ 1.62
CPSF1-202ENST00000527827 NOP14P78316 857 aaKnown RBP25.15■■□□□ 1.62
CPSF1-202ENST00000527827 MDH1BQ5I0G3 518 aa25.15■■□□□ 1.62
CPSF1-202ENST00000527827 ANO7Q6IWH7 933 aa25.15■■□□□ 1.62
CPSF1-202ENST00000527827 PSAPL1Q6NUJ1 521 aa25.15■■□□□ 1.62
CPSF1-202ENST00000527827 TRAPPC11Q7Z392 1133 aa25.15■■□□□ 1.62
CPSF1-202ENST00000527827 ADGRG2Q8IZP9 1017 aa25.15■■□□□ 1.62
CPSF1-202ENST00000527827 CCDC33Q8N5R6 958 aa25.15■■□□□ 1.62
CPSF1-202ENST00000527827 KIAA1958Q8N8K9 716 aa25.15■■□□□ 1.62
CPSF1-202ENST00000527827 CNOT6LQ96LI5 555 aaKnown RBP25.15■■□□□ 1.62
CPSF1-202ENST00000527827 C8orf48Q96LL4 319 aa25.15■■□□□ 1.62
CPSF1-202ENST00000527827 MMP17Q9ULZ9 603 aa25.15■■□□□ 1.62
CPSF1-202ENST00000527827 CST3P01034 146 aaPredicted RBP25.14■■□□□ 1.62
CPSF1-202ENST00000527827 HNRNPLP14866 589 aaKnown RBP eCLIP25.14■■□□□ 1.62
CPSF1-202ENST00000527827 CACNA2D1P54289 1103 aa25.14■■□□□ 1.62
CPSF1-202ENST00000527827 MESP2Q0VG99 397 aa25.14■■□□□ 1.62
CPSF1-202ENST00000527827 STXBP4Q6ZWJ1 553 aa25.14■■□□□ 1.62
CPSF1-202ENST00000527827 C11orf74Q86VG3 221 aa25.14■■□□□ 1.62
CPSF1-202ENST00000527827 SFTPA1Q8IWL2 248 aa25.14■■□□□ 1.62
CPSF1-202ENST00000527827 MDGA1Q8NFP4 955 aa25.14■■□□□ 1.62
CPSF1-202ENST00000527827 KIAA1586Q9HCI6 787 aa25.14■■□□□ 1.62
CPSF1-202ENST00000527827 TMEM30AQ9NV96 361 aa25.14■■□□□ 1.62
CPSF1-202ENST00000527827 EHD2Q9NZN4 543 aa25.14■■□□□ 1.62
CPSF1-202ENST00000527827 CPQQ9Y646 472 aa25.14■■□□□ 1.62
CPSF1-202ENST00000527827 FRYQ5TBA9 3013 aa25.13■■□□□ 1.61
CPSF1-202ENST00000527827 OAS1P00973 400 aaKnown RBP25.13■■□□□ 1.61
CPSF1-202ENST00000527827 GNL1P36915 607 aaPredicted RBP25.13■■□□□ 1.61
CPSF1-202ENST00000527827 SLC6A11P48066 632 aa25.13■■□□□ 1.61
CPSF1-202ENST00000527827 PPP3CCP48454 512 aa25.13■■□□□ 1.61
CPSF1-202ENST00000527827 DHCR24Q15392 516 aa25.13■■□□□ 1.61
CPSF1-202ENST00000527827 CRY1Q16526 586 aa25.13■■□□□ 1.61
CPSF1-202ENST00000527827 TMEM92Q6UXU6 159 aa25.13■■□□□ 1.61
CPSF1-202ENST00000527827 TNMDQ9H2S6 317 aa25.13■■□□□ 1.61
CPSF1-202ENST00000527827 SMPD4Q9NXE4 827 aa25.13■■□□□ 1.61
CPSF1-202ENST00000527827 SCAMP3O14828 347 aaKnown RBP25.12■■□□□ 1.61
CPSF1-202ENST00000527827 GIPC1O14908 333 aa25.12■■□□□ 1.61
CPSF1-202ENST00000527827 TACC1O75410 805 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms