RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 RFX6Q8HWS3 928 aa12.21□□□□□ -0.46
LINC01001-201ENST00000526704 IGDCC3Q8IVU1 814 aa12.21□□□□□ -0.46
LINC01001-201ENST00000526704 FAM71DQ8N9W8 422 aa12.21□□□□□ -0.46
LINC01001-201ENST00000526704 PTPRN2Q92932 1015 aa12.21□□□□□ -0.46
LINC01001-201ENST00000526704 RNPEPL1Q9HAU8 725 aa12.21□□□□□ -0.46
LINC01001-201ENST00000526704 NXF1Q9UBU9 619 aaKnown RBP12.21□□□□□ -0.46
LINC01001-201ENST00000526704 CHMP2BQ9UQN3 213 aa12.21□□□□□ -0.46
LINC01001-201ENST00000526704 APOC4-APOC2K7ER74 178 aa12.2□□□□□ -0.46
LINC01001-201ENST00000526704 APOC2P02655 101 aa12.2□□□□□ -0.46
LINC01001-201ENST00000526704 RAD23BP54727 409 aa12.2□□□□□ -0.46
LINC01001-201ENST00000526704 EIF3EP60228 445 aaKnown RBP12.2□□□□□ -0.46
LINC01001-201ENST00000526704 OVGP1Q12889 678 aa12.2□□□□□ -0.46
LINC01001-201ENST00000526704 CLNKQ7Z7G1 428 aa12.2□□□□□ -0.46
LINC01001-201ENST00000526704 MTDHQ86UE4 582 aaKnown RBP12.2□□□□□ -0.46
LINC01001-201ENST00000526704 PALM2Q8IXS6 379 aa12.2□□□□□ -0.46
LINC01001-201ENST00000526704 CEP120Q8N960 986 aa12.2□□□□□ -0.46
LINC01001-201ENST00000526704 RNF149Q8NC42 400 aa12.2□□□□□ -0.46
LINC01001-201ENST00000526704 SDCBP2Q9H190 292 aa12.2□□□□□ -0.46
LINC01001-201ENST00000526704 PCSK1NQ9UHG2 260 aa12.2□□□□□ -0.46
LINC01001-201ENST00000526704 LNPEPQ9UIQ6 1025 aa12.2□□□□□ -0.46
LINC01001-201ENST00000526704 SRCAPQ6ZRS2 3230 aa12.2□□□□□ -0.46
LINC01001-201ENST00000526704 PAPPA2Q9BXP8 1791 aa12.2□□□□□ -0.46
LINC01001-201ENST00000526704 ECM2O94769 699 aaPredicted RBP12.2□□□□□ -0.46
LINC01001-201ENST00000526704 TNNC2P02585 160 aa12.2□□□□□ -0.46
LINC01001-201ENST00000526704 TSHRP16473 764 aa12.2□□□□□ -0.46
LINC01001-201ENST00000526704 MIPP30301 263 aa12.2□□□□□ -0.46
LINC01001-201ENST00000526704 OSTNP61366 133 aa12.2□□□□□ -0.46
LINC01001-201ENST00000526704 BASP1P80723 227 aaKnown RBP12.2□□□□□ -0.46
LINC01001-201ENST00000526704 IER5Q5VY09 327 aa12.2□□□□□ -0.46
LINC01001-201ENST00000526704 PDIK1LQ8N165 341 aa12.2□□□□□ -0.46
LINC01001-201ENST00000526704 LRRC71Q8N4P6 559 aa12.2□□□□□ -0.46
LINC01001-201ENST00000526704 CHST13Q8NET6 341 aa12.2□□□□□ -0.46
LINC01001-201ENST00000526704 HSPH1Q92598 858 aa12.2□□□□□ -0.46
LINC01001-201ENST00000526704 PEBP4Q96S96 227 aa12.2□□□□□ -0.46
LINC01001-201ENST00000526704 BCO2Q9BYV7 579 aa12.2□□□□□ -0.46
LINC01001-201ENST00000526704 TLE6Q9H808 572 aa12.2□□□□□ -0.46
LINC01001-201ENST00000526704 HMGXB4Q9UGU5 601 aa12.2□□□□□ -0.46
LINC01001-201ENST00000526704 OTOFQ9HC10 1997 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 ZBTB42B2RXF5 422 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 MCF2LO15068 1137 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 MED7O43513 233 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 TRUB2O95900 331 aaKnown RBP12.19□□□□□ -0.46
LINC01001-201ENST00000526704 TROVE2P10155 538 aaKnown RBP eCLIP12.19□□□□□ -0.46
LINC01001-201ENST00000526704 NEK3P51956 506 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 CDH8P55286 799 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 DPYSL3Q14195 570 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 SEPT7Q16181 437 aaKnown RBP12.19□□□□□ -0.46
LINC01001-201ENST00000526704 MPZL3Q6UWV2 235 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 ZBTB8OSQ8IWT0 167 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 KCTD6Q8NC69 237 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 CMASQ8NFW8 434 aaPredicted RBP12.19□□□□□ -0.46
LINC01001-201ENST00000526704 ALKBH8Q96BT7 664 aaKnown RBP12.19□□□□□ -0.46
LINC01001-201ENST00000526704 ANKRD36BP1Q96IX9 119 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 SERAC1Q96JX3 654 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 TWNKQ96RR1 684 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 VPS11Q9H270 941 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 MANSC1Q9H8J5 431 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 PTPRHQ9HD43 1115 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 HOXC10Q9NYD6 342 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 SIX4Q9UIU6 781 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 DCTN4Q9UJW0 460 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 CITO14578 2027 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 SMAPO00193 183 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 NFKBIEO00221 500 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 PPP1R12AO14974 1030 aaPredicted RBP12.19□□□□□ -0.46
LINC01001-201ENST00000526704 B4GALT4O60513 344 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 DHRS4L1P0CG22 281 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 RBP3P10745 1247 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 CALB2P22676 271 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 EDNRBP24530 442 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 MARK3P27448 753 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 PTPN4P29074 926 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 ELK3P41970 407 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 RASSF2P50749 326 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 PTK7Q13308 1070 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 KCNJ11Q14654 390 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 EEF1DP3Q658K8 133 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 NPNTQ6UXI9 565 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 TSHZ1Q6ZSZ6 1077 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 CDR2LQ86X02 465 aaPredicted RBP12.19□□□□□ -0.46
LINC01001-201ENST00000526704 TRIM50Q86XT4 487 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 TMEM192Q8IY95 271 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 SLC4A11Q8NBS3 891 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 STK32AQ8WU08 396 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 CYTH2Q99418 400 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 MIPEPQ99797 713 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 SMYD3Q9H7B4 428 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 ALG13Q9NP73 1137 aaKnown RBP12.19□□□□□ -0.46
LINC01001-201ENST00000526704 SAR1AQ9NR31 198 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 BATF3Q9NR55 127 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 WDR35Q9P2L0 1181 aa12.19□□□□□ -0.46
LINC01001-201ENST00000526704 TCRBV9S1A1TA0A576 114 aa12.18□□□□□ -0.46
LINC01001-201ENST00000526704 SOWAHBA6NEL2 793 aa12.18□□□□□ -0.46
LINC01001-201ENST00000526704 KBTBD13C9JR72 458 aa12.18□□□□□ -0.46
LINC01001-201ENST00000526704 B4GALT5O43286 388 aa12.18□□□□□ -0.46
LINC01001-201ENST00000526704 TPBGLP0DKB5 382 aa12.18□□□□□ -0.46
LINC01001-201ENST00000526704 CXCL8P10145 99 aa12.18□□□□□ -0.46
LINC01001-201ENST00000526704 CDC25CP30307 473 aa12.18□□□□□ -0.46
LINC01001-201ENST00000526704 ETV4P43268 484 aa12.18□□□□□ -0.46
LINC01001-201ENST00000526704 MMRN1Q13201 1228 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms