RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 HIPK4Q8NE63 616 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 OR2I1PQ8NGU4 316 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 OR6B3Q8NGW1 331 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 CEP70Q8NHQ1 597 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 IPCEF1Q8WWN9 437 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 LARP4BQ92615 738 aaKnown RBP3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 SH3KBP1Q96B97 665 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 TBC1D31Q96DN5 1066 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 CCDC34Q96HJ3 373 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 CNDP2Q96KP4 475 aaKnown RBP3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 MRGPRX4Q96LA9 322 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 COG8Q96MW5 612 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 GBP4Q96PP9 640 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 TWNKQ96RR1 684 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 PPP1R9BQ96SB3 815 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 DMRTA2Q96SC8 542 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 NCAPGQ9BPX3 1015 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 OSBPL6Q9BZF3 934 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 TWSG1Q9GZX9 223 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 RNPEPQ9H4A4 650 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 ZNF703Q9H7S9 590 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 MLXIPQ9HAP2 919 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 RGL1Q9NZL6 768 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 EPS15L1Q9UBC2 864 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 RBPJLQ9UBG7 517 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 RGS17Q9UGC6 210 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 PCDHB6Q9Y5E3 794 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 SNX8Q9Y5X2 465 aa3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 SOS1Q07889 1333 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC4-207ENST00000526141 RSF1Q96T23 1441 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 GOLGA6L6A8MZA4 724 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 GOLGA6L22H0YM25 854 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 GTPBP1O00178 669 aaKnown RBP3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 CHL1O00533 1208 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 ASNA1O43681 348 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 CDC14BO60729 498 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 HMMRO75330 724 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 TBCAO75347 108 aaKnown RBP3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 TSPAN9O75954 239 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 ACTL6BO94805 426 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 ENDOD1O94919 500 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 PCDH8O95206 1070 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 NDST3O95803 873 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 MLYCDO95822 493 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 HNRNPA1P09651 372 aaKnown RBP eCLIP3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 JUPP14923 745 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 MALP21145 153 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 SCP2P22307 547 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 GABRB3P28472 473 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 HIBADHP31937 336 aaKnown RBP3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 GLRBP48167 497 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 AARSP49588 968 aaKnown RBP eCLIP3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 CARSP49589 748 aaKnown RBP3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 FLT3LGP49771 235 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 ZNF131P52739 623 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 PRKAA2P54646 552 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 BPIFB3P59826 476 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 NEXNQ0ZGT2 675 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 CUL4BQ13620 913 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 WTAPQ15007 396 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 SMAD1Q15797 465 aaKnown RBP3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 CSRP2Q16527 193 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 CCDC158Q5M9N0 1113 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 PHF19Q5T6S3 580 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 SLC9C2Q5TAH2 1124 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 EMC10Q5UCC4 262 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 LRCH2Q5VUJ6 765 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 ZNF449Q6P9G9 518 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 USP17L6PQ6QN14 398 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 UNQ6494/PRO21346Q6UXR6 183 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 DPP8Q6V1X1 898 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 ZNF783Q6ZMS7 281 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 GADL1Q6ZQY3 521 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 UNC13DQ70J99 1090 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 RTL10Q7L3V2 364 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 CHD1LQ86WJ1 897 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 IQCA1Q86XH1 822 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 GLB1L2Q8IW92 636 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 CCDC117Q8IWD4 279 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 BRSK2Q8IWQ3 736 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 ULK2Q8IYT8 1036 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 CELF5Q8N6W0 485 aaKnown RBP3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 CDYL2Q8N8U2 506 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 GPR156Q8NFN8 814 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 TOR1AIP2Q8NFQ8 470 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 OR8H1Q8NGG4 311 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 GAB3Q8WWW8 586 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 LRRC46Q96FV0 321 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 SNX27Q96L92 541 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 SPAG5Q96R06 1193 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 OR14A2Q96R54 314 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 AGAP2Q99490 1192 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 EYA3Q99504 573 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 P2RX7Q99572 595 aaKnown RBP3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 PRPF18Q99633 342 aaKnown RBP3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 EDEM3Q9BZQ6 932 aa3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 PABPC3Q9H361 631 aaKnown RBP3.37□□□□□ -1.87
TRAPPC4-207ENST00000526141 MTG2Q9H4K7 406 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms