RNA–Protein interactions for RNA: ENST00000526009.5

CLNS1A-205, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 747 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-205ENST00000526009 ARHGEF35A5YM69 484 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 A6NHS1 94 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 CDX4O14627 284 aaPredicted RBP8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 TRDMT1O14717 391 aaKnown RBP8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 DCLK1O15075 740 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 NEMFO60524 1076 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 CDKL5O76039 1030 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 OAZ2O95190 189 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 VNN2O95498 520 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 FGF19O95750 216 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 OR4Q2P0C623 313 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 EPXP11678 715 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 GBP1P32455 592 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 MCM2P49736 904 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 RUNX3Q13761 415 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 ZNF568Q3ZCX4 644 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 TTC39BQ5VTQ0 682 aaPredicted RBP8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 FSTL4Q6MZW2 842 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 ZNF438Q7Z4V0 828 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 USP37Q86T82 979 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 ITIH5Q86UX2 942 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 PSMG2Q969U7 264 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 MTMR9Q96QG7 549 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 HHIPQ96QV1 700 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 TCHPQ9BT92 498 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 CDT1Q9H211 546 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 TASP1Q9H6P5 420 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 POLD4Q9HCU8 107 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 GKN1Q9NS71 199 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 POLR3BQ9NW08 1133 aaPredicted RBP8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 CNTN3Q9P232 1028 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 EBF1Q9UH73 591 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 TIMM13Q9Y5L4 95 aaPredicted RBP8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 DMXL2Q8TDJ6 3036 aa8.11□□□□□ -1.11
CLNS1A-205ENST00000526009 TRIP11Q15643 1979 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 LOC400499M0QZD8 3231 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 ELOA3CA0A087WX78 387 aaPredicted RBP8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 ELOA3DA6NLF2 546 aaPredicted RBP8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 SHISA8B8ZZ34 492 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 TAF4O00268 1085 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 NDUFB5O43674 189 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 HYAL3O43820 417 aaPredicted RBP8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 MED24O75448 989 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 APBB3O95704 486 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 EGFP01133 1207 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 DRD1P21728 446 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 KRT2P35908 639 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 IRX4P78413 519 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 GPR17Q13304 367 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 UAP1L1Q3KQV9 507 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 ELOA3BQ3SY89 546 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 FBXO43Q4G163 708 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 CENPPQ6IPU0 288 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 KIAA1211LQ6NV74 962 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 SYT13Q7L8C5 426 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 C11orf74Q86VG3 221 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 DEFB124Q8NES8 71 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 ELOA3Q8NG57 546 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 KIFAP3Q92845 792 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 EXOC4Q96A65 974 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 C18orf25Q96B23 403 aaPredicted RBP8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 ACO2Q99798 780 aaKnown RBP8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 FAM83CQ9BQN1 747 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 MRPL4Q9BYD3 311 aaKnown RBP8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 SLC32A1Q9H598 525 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 FBRSL1Q9HCM7 1045 aaKnown RBP8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 BRMS1Q9HCU9 246 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 PTPRHQ9HD43 1115 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 DNAJB12Q9NXW2 375 aaKnown RBP8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 MSRB2Q9Y3D2 182 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 NEUROG3Q9Y4Z2 214 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 CYP46A1Q9Y6A2 500 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 CELSR3Q9NYQ7 3312 aa8.1□□□□□ -1.11
CLNS1A-205ENST00000526009 STK36Q9NRP7 1315 aa8.09□□□□□ -1.11
CLNS1A-205ENST00000526009 ATG2BQ96BY7 2078 aa8.09□□□□□ -1.11
CLNS1A-205ENST00000526009 FREM2Q5SZK8 3169 aa8.09□□□□□ -1.11
CLNS1A-205ENST00000526009 OTOL1A6NHN0 477 aaPredicted RBP8.09□□□□□ -1.11
CLNS1A-205ENST00000526009 OR6C75A6NL08 312 aa8.09□□□□□ -1.11
CLNS1A-205ENST00000526009 CCDC169A6NNP5 214 aa8.09□□□□□ -1.11
CLNS1A-205ENST00000526009 PATE3B3GLJ2 98 aa8.09□□□□□ -1.11
CLNS1A-205ENST00000526009 M0QZQ0 153 aa8.09□□□□□ -1.11
CLNS1A-205ENST00000526009 MMP20O60882 483 aa8.09□□□□□ -1.11
CLNS1A-205ENST00000526009 MAP3K6O95382 1288 aa8.09□□□□□ -1.11
CLNS1A-205ENST00000526009 PRAMEF12O95522 483 aa8.09□□□□□ -1.11
CLNS1A-205ENST00000526009 MCF2P10911 925 aa8.09□□□□□ -1.11
CLNS1A-205ENST00000526009 RPA1P27694 616 aa8.09□□□□□ -1.11
CLNS1A-205ENST00000526009 CDC25CP30307 473 aa8.09□□□□□ -1.11
CLNS1A-205ENST00000526009 ADH7P40394 386 aa8.09□□□□□ -1.11
CLNS1A-205ENST00000526009 GALK1P51570 392 aa8.09□□□□□ -1.11
CLNS1A-205ENST00000526009 DGKEP52429 567 aa8.09□□□□□ -1.11
CLNS1A-205ENST00000526009 PEX3P56589 373 aa8.09□□□□□ -1.11
CLNS1A-205ENST00000526009 CYP4F8P98187 520 aa8.09□□□□□ -1.11
CLNS1A-205ENST00000526009 SCRN1Q12765 414 aa8.09□□□□□ -1.11
CLNS1A-205ENST00000526009 DMC1Q14565 340 aa8.09□□□□□ -1.11
CLNS1A-205ENST00000526009 TAF12Q16514 161 aa8.09□□□□□ -1.11
CLNS1A-205ENST00000526009 USP39Q53GS9 565 aaKnown RBP8.09□□□□□ -1.11
CLNS1A-205ENST00000526009 PMS2CLQ68D20 193 aa8.09□□□□□ -1.11
CLNS1A-205ENST00000526009 TRIM68Q6AZZ1 485 aa8.09□□□□□ -1.11
CLNS1A-205ENST00000526009 CMTM8Q8IZV2 173 aa8.09□□□□□ -1.11
CLNS1A-205ENST00000526009 ATAD1Q8NBU5 361 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms