RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 SH3RF2Q8TEC5 729 aa12.55□□□□□ -0.4
CTNNA1-237ENST00000523275 ATP2A3Q93084 1043 aa12.55□□□□□ -0.4
CTNNA1-237ENST00000523275 C8orf48Q96LL4 319 aa12.55□□□□□ -0.4
CTNNA1-237ENST00000523275 P2RY13Q9BPV8 354 aa12.55□□□□□ -0.4
CTNNA1-237ENST00000523275 GZF1Q9H116 711 aaPredicted RBP12.55□□□□□ -0.4
CTNNA1-237ENST00000523275 ECT2Q9H8V3 914 aa12.55□□□□□ -0.4
CTNNA1-237ENST00000523275 PARD6AQ9NPB6 346 aa12.55□□□□□ -0.4
CTNNA1-237ENST00000523275 TRPM5Q9NZQ8 1165 aa12.55□□□□□ -0.4
CTNNA1-237ENST00000523275 SLC8A2Q9UPR5 921 aa12.55□□□□□ -0.4
CTNNA1-237ENST00000523275 WNT6Q9Y6F9 365 aa12.55□□□□□ -0.4
CTNNA1-237ENST00000523275 FRYLO94915 3013 aa12.55□□□□□ -0.4
CTNNA1-237ENST00000523275 TRIM66O15016 1216 aa12.54□□□□□ -0.4
CTNNA1-237ENST00000523275 LRP3O75074 770 aa12.54□□□□□ -0.4
CTNNA1-237ENST00000523275 PHACTR2O75167 634 aa12.54□□□□□ -0.4
CTNNA1-237ENST00000523275 EGFP01133 1207 aa12.54□□□□□ -0.4
CTNNA1-237ENST00000523275 TCF3P15923 654 aa12.54□□□□□ -0.4
CTNNA1-237ENST00000523275 HOXC13P31276 330 aa12.54□□□□□ -0.4
CTNNA1-237ENST00000523275 PPP3CCP48454 512 aa12.54□□□□□ -0.4
CTNNA1-237ENST00000523275 IFNAR2P48551 515 aa12.54□□□□□ -0.4
CTNNA1-237ENST00000523275 USP46P62068 366 aa12.54□□□□□ -0.4
CTNNA1-237ENST00000523275 USP4Q13107 963 aa12.54□□□□□ -0.4
CTNNA1-237ENST00000523275 NR1H3Q13133 447 aa12.54□□□□□ -0.4
CTNNA1-237ENST00000523275 PKP1Q13835 747 aa12.54□□□□□ -0.4
CTNNA1-237ENST00000523275 PKN3Q6P5Z2 889 aa12.54□□□□□ -0.4
CTNNA1-237ENST00000523275 GRAMD1CQ8IYS0 662 aa12.54□□□□□ -0.4
CTNNA1-237ENST00000523275 SPRYD3Q8NCJ5 442 aa12.54□□□□□ -0.4
CTNNA1-237ENST00000523275 SYAP1Q96A49 352 aaPredicted RBP12.54□□□□□ -0.4
CTNNA1-237ENST00000523275 TTLL2Q9BWV7 592 aa12.54□□□□□ -0.4
CTNNA1-237ENST00000523275 XYLT2Q9H1B5 865 aa12.54□□□□□ -0.4
CTNNA1-237ENST00000523275 NXF1Q9UBU9 619 aaKnown RBP12.54□□□□□ -0.4
CTNNA1-237ENST00000523275 SERTAD1Q9UHV2 236 aa12.54□□□□□ -0.4
CTNNA1-237ENST00000523275 ARHGAP26Q9UNA1 814 aa12.54□□□□□ -0.4
CTNNA1-237ENST00000523275 NME7Q9Y5B8 376 aa12.54□□□□□ -0.4
CTNNA1-237ENST00000523275 DENND4CQ5VZ89 1909 aa12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 CCDC163A0A0D9SF12 145 aa12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 MED19A0JLT2 244 aaPredicted RBP12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 ZNF840PA6NDX5 716 aa12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 A8MXQ7 604 aa12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 F8VP50 259 aa12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 KLRC4O43908 158 aa12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 RNF40O75150 1001 aa12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 CASP4P49662 377 aa12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 AP3M2P53677 418 aa12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 ATXN1P54253 815 aaKnown RBP12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 NOP14P78316 857 aaKnown RBP12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 STK4Q13043 487 aa12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 PSMD2Q13200 908 aa12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 BIRC3Q13489 604 aa12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 EML3Q32P44 896 aa12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 FBXO43Q4G163 708 aa12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 TDRD10Q5VZ19 366 aaKnown RBP12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 NAIF1Q69YI7 327 aaPredicted RBP12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 CAMKK1Q8N5S9 505 aa12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 FAM160A2Q8N612 972 aaPredicted RBP12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 CD101Q93033 1021 aa12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 PAGE5Q96GU1 130 aa12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 B3GNT5Q9BYG0 378 aa12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 ELOVL4Q9GZR5 314 aa12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 LINC00597Q9H2U6 94 aa12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 DPEP3Q9H4B8 488 aa12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 CDV3Q9UKY7 258 aaKnown RBP12.53□□□□□ -0.4
CTNNA1-237ENST00000523275 NCOR2Q9Y618 2525 aa12.52□□□□□ -0.4
CTNNA1-237ENST00000523275 DCHS1Q96JQ0 3298 aa12.52□□□□□ -0.41
CTNNA1-237ENST00000523275 LEFTY2O00292 366 aa12.52□□□□□ -0.41
CTNNA1-237ENST00000523275 ACTN4O43707 911 aaKnown RBP12.52□□□□□ -0.41
CTNNA1-237ENST00000523275 ABL1P00519 1130 aa12.52□□□□□ -0.41
CTNNA1-237ENST00000523275 CMA1P23946 247 aa12.52□□□□□ -0.41
CTNNA1-237ENST00000523275 PXNP49023 591 aaPredicted RBP12.52□□□□□ -0.41
CTNNA1-237ENST00000523275 CLDN10P78369 228 aa12.52□□□□□ -0.41
CTNNA1-237ENST00000523275 TAF10Q12962 218 aa12.52□□□□□ -0.41
CTNNA1-237ENST00000523275 CSRP2Q16527 193 aa12.52□□□□□ -0.41
CTNNA1-237ENST00000523275 B3GALNT2Q8NCR0 500 aa12.52□□□□□ -0.41
CTNNA1-237ENST00000523275 PLEKHO2Q8TD55 490 aa12.52□□□□□ -0.41
CTNNA1-237ENST00000523275 PARD3BQ8TEW8 1205 aa12.52□□□□□ -0.41
CTNNA1-237ENST00000523275 TMEM174Q8WUU8 243 aa12.52□□□□□ -0.41
CTNNA1-237ENST00000523275 GAB3Q8WWW8 586 aa12.52□□□□□ -0.41
CTNNA1-237ENST00000523275 ZNF518BQ9C0D4 1074 aa12.52□□□□□ -0.41
CTNNA1-237ENST00000523275 RNF38Q9H0F5 515 aa12.52□□□□□ -0.41
CTNNA1-237ENST00000523275 VRTNQ9H8Y1 702 aa12.52□□□□□ -0.41
CTNNA1-237ENST00000523275 SEMA4GQ9NTN9 838 aa12.52□□□□□ -0.41
CTNNA1-237ENST00000523275 EXOC1Q9NV70 894 aa12.52□□□□□ -0.41
CTNNA1-237ENST00000523275 DMAC2Q9NW81 257 aa12.52□□□□□ -0.41
CTNNA1-237ENST00000523275 USP25Q9UHP3 1055 aa12.52□□□□□ -0.41
CTNNA1-237ENST00000523275 DMXL1Q9Y485 3027 aa12.52□□□□□ -0.41
CTNNA1-237ENST00000523275 KIF26AQ9ULI4 1882 aaPredicted RBP12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 ZNF638Q14966 1978 aaKnown RBP12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 LRRIQ3A6PVS8 624 aaPredicted RBP12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 CLDN5O00501 218 aa12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 PDXKO00764 312 aa12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 FOXD2O60548 495 aaPredicted RBP12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 RPP40O75818 363 aaKnown RBP12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 CLSTN1O94985 981 aa12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 NFATC1O95644 943 aa12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 C4BPAP04003 597 aaKnown RBP12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 CACNA2D1P54289 1103 aa12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 CDH8P55286 799 aa12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 SLC7A9P82251 487 aa12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 ZXDBP98169 803 aa12.51□□□□□ -0.41
CTNNA1-237ENST00000523275 NCOA4Q13772 614 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms