RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 C2orf42Q9NWW7 574 aa22.06■■□□□ 1.12
SDCBP-209ENST00000522243 HELZP42694 1942 aaKnown RBP22.06■■□□□ 1.12
SDCBP-209ENST00000522243 FAM186AA6NE01 2351 aa22.05■■□□□ 1.12
SDCBP-209ENST00000522243 A0A1W2PQ27 194 aa22.05■■□□□ 1.12
SDCBP-209ENST00000522243 A0A1W2PQ64 194 aa22.05■■□□□ 1.12
SDCBP-209ENST00000522243 A0A1W2PQD8 194 aa22.05■■□□□ 1.12
SDCBP-209ENST00000522243 CALUO43852 315 aaPredicted RBP22.05■■□□□ 1.12
SDCBP-209ENST00000522243 RHOBTB3O94955 611 aa22.05■■□□□ 1.12
SDCBP-209ENST00000522243 HDCP19113 662 aa22.05■■□□□ 1.12
SDCBP-209ENST00000522243 CCINQ13939 588 aa22.05■■□□□ 1.12
SDCBP-209ENST00000522243 KCNB1Q14721 858 aa22.05■■□□□ 1.12
SDCBP-209ENST00000522243 ZNF77Q15935 545 aa22.05■■□□□ 1.12
SDCBP-209ENST00000522243 CHFRQ96EP1 664 aa22.05■■□□□ 1.12
SDCBP-209ENST00000522243 C8orf48Q96LL4 319 aa22.05■■□□□ 1.12
SDCBP-209ENST00000522243 FAM126AQ9BYI3 521 aaPredicted RBP22.05■■□□□ 1.12
SDCBP-209ENST00000522243 VRTNQ9H8Y1 702 aa22.05■■□□□ 1.12
SDCBP-209ENST00000522243 TRPM5Q9NZQ8 1165 aa22.05■■□□□ 1.12
SDCBP-209ENST00000522243 WNT6Q9Y6F9 365 aa22.05■■□□□ 1.12
SDCBP-209ENST00000522243 ZNF202O95125 648 aa22.04■■□□□ 1.12
SDCBP-209ENST00000522243 ABL1P00519 1130 aa22.04■■□□□ 1.12
SDCBP-209ENST00000522243 HOXC13P31276 330 aa22.04■■□□□ 1.12
SDCBP-209ENST00000522243 DMWDQ09019 674 aa22.04■■□□□ 1.12
SDCBP-209ENST00000522243 USP4Q13107 963 aa22.04■■□□□ 1.12
SDCBP-209ENST00000522243 TMC2Q8TDI7 906 aa22.04■■□□□ 1.12
SDCBP-209ENST00000522243 SH3RF2Q8TEC5 729 aa22.04■■□□□ 1.12
SDCBP-209ENST00000522243 ELOVL4Q9GZR5 314 aa22.04■■□□□ 1.12
SDCBP-209ENST00000522243 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.04■■□□□ 1.122e-6■■■■■ 96.1
SDCBP-209ENST00000522243 DUS2Q9NX74 493 aaKnown RBP22.04■■□□□ 1.12
SDCBP-209ENST00000522243 NCDNQ9UBB6 729 aa22.04■■□□□ 1.12
SDCBP-209ENST00000522243 SMG5Q9UPR3 1016 aaKnown RBP22.04■■□□□ 1.12
SDCBP-209ENST00000522243 TRAF3IP3Q9Y228 551 aa22.04■■□□□ 1.12
SDCBP-209ENST00000522243 FRMD4BQ9Y2L6 1034 aa22.04■■□□□ 1.12
SDCBP-209ENST00000522243 CHURC1-FNTBB4DL54 471 aa22.03■■□□□ 1.12
SDCBP-209ENST00000522243 IFNAR2P48551 515 aa22.03■■□□□ 1.12
SDCBP-209ENST00000522243 FNTBP49356 437 aa22.03■■□□□ 1.12
SDCBP-209ENST00000522243 NRLP54845 237 aa22.03■■□□□ 1.12
SDCBP-209ENST00000522243 TAF10Q12962 218 aa22.03■■□□□ 1.12
SDCBP-209ENST00000522243 PDGFRLQ15198 375 aa22.03■■□□□ 1.12
SDCBP-209ENST00000522243 ZACNQ401N2 412 aa22.03■■□□□ 1.12
SDCBP-209ENST00000522243 NAIF1Q69YI7 327 aaPredicted RBP22.03■■□□□ 1.12
SDCBP-209ENST00000522243 HEATR6Q6AI08 1181 aaKnown RBP22.03■■□□□ 1.12
SDCBP-209ENST00000522243 SPOPLQ6IQ16 392 aa22.03■■□□□ 1.12
SDCBP-209ENST00000522243 FSTL4Q6MZW2 842 aa22.03■■□□□ 1.12
SDCBP-209ENST00000522243 SV2AQ7L0J3 742 aa22.03■■□□□ 1.12
SDCBP-209ENST00000522243 TMEM174Q8WUU8 243 aa22.03■■□□□ 1.12
SDCBP-209ENST00000522243 OSCP1Q8WVF1 389 aa22.03■■□□□ 1.12
SDCBP-209ENST00000522243 CEP295NLQ96MC4 621 aa22.03■■□□□ 1.12
SDCBP-209ENST00000522243 MED10Q9BTT4 135 aa22.03■■□□□ 1.12
SDCBP-209ENST00000522243 TTLL2Q9BWV7 592 aa22.03■■□□□ 1.12
SDCBP-209ENST00000522243 EPC1Q9H2F5 836 aa22.03■■□□□ 1.12
SDCBP-209ENST00000522243 ECT2Q9H8V3 914 aa22.03■■□□□ 1.12
SDCBP-209ENST00000522243 ATG2BQ96BY7 2078 aa22.03■■□□□ 1.12
SDCBP-209ENST00000522243 KIF20AO95235 890 aa22.02■■□□□ 1.12
SDCBP-209ENST00000522243 NR2F2P24468 414 aa22.02■■□□□ 1.12
SDCBP-209ENST00000522243 VAMP7P51809 220 aa22.02■■□□□ 1.12
SDCBP-209ENST00000522243 NOP14P78316 857 aaKnown RBP22.02■■□□□ 1.12
SDCBP-209ENST00000522243 ZXDBP98169 803 aa22.02■■□□□ 1.12
SDCBP-209ENST00000522243 ORC1Q13415 861 aa22.02■■□□□ 1.12
SDCBP-209ENST00000522243 LPAL2Q16609 132 aa22.02■■□□□ 1.12
SDCBP-209ENST00000522243 SGSM1Q2NKQ1 1148 aa22.02■■□□□ 1.12
SDCBP-209ENST00000522243 TMEM196Q5HYL7 178 aa22.02■■□□□ 1.12
SDCBP-209ENST00000522243 C1orf220Q5T0J3 134 aa22.02■■□□□ 1.12
SDCBP-209ENST00000522243 PKN3Q6P5Z2 889 aa22.02■■□□□ 1.12
SDCBP-209ENST00000522243 ACOT1Q86TX2 421 aa22.02■■□□□ 1.12
SDCBP-209ENST00000522243 KCNK16Q96T55 309 aa22.02■■□□□ 1.12
SDCBP-209ENST00000522243 LINC00597Q9H2U6 94 aa22.02■■□□□ 1.12
SDCBP-209ENST00000522243 FBRSL1Q9HCM7 1045 aaKnown RBP22.02■■□□□ 1.12
SDCBP-209ENST00000522243 EHD2Q9NZN4 543 aa22.02■■□□□ 1.12
SDCBP-209ENST00000522243 RIF1Q5UIP0 2472 aaKnown RBP22.02■■□□□ 1.12
SDCBP-209ENST00000522243 ZNF840PA6NDX5 716 aa22.01■■□□□ 1.11
SDCBP-209ENST00000522243 K7ESF4 209 aa22.01■■□□□ 1.11
SDCBP-209ENST00000522243 TRDMT1O14717 391 aaKnown RBP22.01■■□□□ 1.11
SDCBP-209ENST00000522243 EGFP01133 1207 aa22.01■■□□□ 1.11
SDCBP-209ENST00000522243 HLA-DRAP01903 254 aa22.01■■□□□ 1.11
SDCBP-209ENST00000522243 TRIM49P0CI25 452 aa22.01■■□□□ 1.11
SDCBP-209ENST00000522243 TRIM49CP0CI26 452 aa22.01■■□□□ 1.11
SDCBP-209ENST00000522243 GJA4P35212 333 aa22.01■■□□□ 1.11
SDCBP-209ENST00000522243 PIK3CAP42336 1068 aa22.01■■□□□ 1.11
SDCBP-209ENST00000522243 ID4P47928 161 aa22.01■■□□□ 1.11
SDCBP-209ENST00000522243 GALK1P51570 392 aa22.01■■□□□ 1.11
SDCBP-209ENST00000522243 GRSF1Q12849 480 aaKnown RBP eCLIP22.01■■□□□ 1.11
SDCBP-209ENST00000522243 PAQR9Q6ZVX9 377 aa22.01■■□□□ 1.11
SDCBP-209ENST00000522243 FAM35AQ86V20 835 aa22.01■■□□□ 1.11
SDCBP-209ENST00000522243 SYNPOQ8N3V7 929 aa22.01■■□□□ 1.11
SDCBP-209ENST00000522243 CPA6Q8N4T0 437 aa22.01■■□□□ 1.11
SDCBP-209ENST00000522243 RNF38Q9H0F5 515 aa22.01■■□□□ 1.11
SDCBP-209ENST00000522243 MMRN2Q9H8L6 949 aa22.01■■□□□ 1.11
SDCBP-209ENST00000522243 ARHGAP26Q9UNA1 814 aa22.01■■□□□ 1.11
SDCBP-209ENST00000522243 VPS13AQ96RL7 3174 aa22■■□□□ 1.11
SDCBP-209ENST00000522243 AKAP3O75969 853 aa22■■□□□ 1.11
SDCBP-209ENST00000522243 AMPD2Q01433 879 aa22■■□□□ 1.11
SDCBP-209ENST00000522243 SRSF5Q13243 272 aaKnown RBP22■■□□□ 1.11
SDCBP-209ENST00000522243 EML3Q32P44 896 aa22■■□□□ 1.11
SDCBP-209ENST00000522243 NUP93Q8N1F7 819 aa22■■□□□ 1.11
SDCBP-209ENST00000522243 TNIP3Q96KP6 325 aa22■■□□□ 1.11
SDCBP-209ENST00000522243 SLITRK1Q96PX8 696 aa22■■□□□ 1.11
SDCBP-209ENST00000522243 SMPD4Q9NXE4 827 aa22■■□□□ 1.11
SDCBP-209ENST00000522243 HMGXB4Q9UGU5 601 aa22■■□□□ 1.11
SDCBP-209ENST00000522243 DMDP11532 3685 aa22■■□□□ 1.11
SDCBP-209ENST00000522243 MYH10P35580 1976 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms