RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 PDE1AP54750 535 aa5.27□□□□□ -1.57
CLK4-207ENST00000520909 TCF15Q12870 199 aa5.27□□□□□ -1.57
CLK4-207ENST00000520909 INAVAQ3KP66 663 aa5.27□□□□□ -1.57
CLK4-207ENST00000520909 TREML2Q5T2D2 321 aa5.27□□□□□ -1.57
CLK4-207ENST00000520909 NAPRTQ6XQN6 538 aa5.27□□□□□ -1.57
CLK4-207ENST00000520909 USP37Q86T82 979 aa5.27□□□□□ -1.57
CLK4-207ENST00000520909 CNTD1Q8N815 330 aa5.27□□□□□ -1.57
CLK4-207ENST00000520909 C8orf58Q8NAV2 365 aa5.27□□□□□ -1.57
CLK4-207ENST00000520909 FAXDC2Q96IV6 333 aa5.27□□□□□ -1.57
CLK4-207ENST00000520909 PUS7Q96PZ0 661 aaKnown RBP5.27□□□□□ -1.57
CLK4-207ENST00000520909 PUS7LQ9H0K6 701 aaKnown RBP5.27□□□□□ -1.57
CLK4-207ENST00000520909 EBF3Q9H4W6 596 aa5.27□□□□□ -1.57
CLK4-207ENST00000520909 DUSP22Q9NRW4 184 aa5.27□□□□□ -1.57
CLK4-207ENST00000520909 CCDC144AA2RUR9 1427 aa5.27□□□□□ -1.57
CLK4-207ENST00000520909 WDR17Q8IZU2 1322 aa5.27□□□□□ -1.57
CLK4-207ENST00000520909 RPRD2Q5VT52 1461 aaKnown RBP5.27□□□□□ -1.57
CLK4-207ENST00000520909 IL6RP08887 468 aaPredicted RBP5.26□□□□□ -1.57
CLK4-207ENST00000520909 VIL1P09327 827 aaKnown RBP5.26□□□□□ -1.57
CLK4-207ENST00000520909 LIPAP38571 399 aa5.26□□□□□ -1.57
CLK4-207ENST00000520909 PIK3CGP48736 1102 aa5.26□□□□□ -1.57
CLK4-207ENST00000520909 CYP4F2P78329 520 aa5.26□□□□□ -1.57
CLK4-207ENST00000520909 GTF2H3Q13889 308 aa5.26□□□□□ -1.57
CLK4-207ENST00000520909 KIF22Q14807 665 aa5.26□□□□□ -1.57
CLK4-207ENST00000520909 TMEM108Q6UXF1 575 aa5.26□□□□□ -1.57
CLK4-207ENST00000520909 PARS2Q7L3T8 475 aaKnown RBP5.26□□□□□ -1.57
CLK4-207ENST00000520909 MAVSQ7Z434 540 aa5.26□□□□□ -1.57
CLK4-207ENST00000520909 LRRC71Q8N4P6 559 aa5.26□□□□□ -1.57
CLK4-207ENST00000520909 NANOGP1Q8N7R0 232 aa5.26□□□□□ -1.57
CLK4-207ENST00000520909 DDX17Q92841 729 aaKnown RBP5.26□□□□□ -1.57
CLK4-207ENST00000520909 PDGFCQ9NRA1 345 aa5.26□□□□□ -1.57
CLK4-207ENST00000520909 SLC5A4Q9NY91 659 aa5.26□□□□□ -1.57
CLK4-207ENST00000520909 MRFAP1Q9Y605 127 aa5.26□□□□□ -1.57
CLK4-207ENST00000520909 DEPDC5O75140 1603 aa5.26□□□□□ -1.57
CLK4-207ENST00000520909 MROH1Q8NDA8 1641 aa5.26□□□□□ -1.57
CLK4-207ENST00000520909 RNF17Q9BXT8 1623 aaKnown RBP5.26□□□□□ -1.57
CLK4-207ENST00000520909 AGLP35573 1532 aa5.26□□□□□ -1.57
CLK4-207ENST00000520909 PRDM15P57071 1507 aaPredicted RBP5.26□□□□□ -1.57
CLK4-207ENST00000520909 ARHGEF40Q8TER5 1519 aa5.26□□□□□ -1.57
CLK4-207ENST00000520909 VWDEQ8N2E2 1590 aa5.26□□□□□ -1.57
CLK4-207ENST00000520909 SOCS2O14508 198 aa5.25□□□□□ -1.57
CLK4-207ENST00000520909 XPOTO43592 962 aaKnown RBP5.25□□□□□ -1.57
CLK4-207ENST00000520909 GNAI2P04899 355 aa5.25□□□□□ -1.57
CLK4-207ENST00000520909 FTH1P19P0C7X4 201 aa5.25□□□□□ -1.57
CLK4-207ENST00000520909 CCKARP32238 428 aa5.25□□□□□ -1.57
CLK4-207ENST00000520909 TRIM72Q6ZMU5 477 aa5.25□□□□□ -1.57
CLK4-207ENST00000520909 PPP1R32Q7Z5V6 425 aa5.25□□□□□ -1.57
CLK4-207ENST00000520909 MRPL10Q7Z7H8 261 aaKnown RBP5.25□□□□□ -1.57
CLK4-207ENST00000520909 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.25□□□□□ -1.57
CLK4-207ENST00000520909 C3orf20Q8ND61 904 aa5.25□□□□□ -1.57
CLK4-207ENST00000520909 SPATA3Q8NHX4 192 aa5.25□□□□□ -1.57
CLK4-207ENST00000520909 CYP2W1Q8TAV3 490 aa5.25□□□□□ -1.57
CLK4-207ENST00000520909 TINAGL1Q9GZM7 467 aaPredicted RBP5.25□□□□□ -1.57
CLK4-207ENST00000520909 TRNAU1APQ9NX07 287 aaKnown RBP5.25□□□□□ -1.57
CLK4-207ENST00000520909 ADAMTS5Q9UNA0 930 aa5.25□□□□□ -1.57
CLK4-207ENST00000520909 AFG3L2Q9Y4W6 797 aa5.25□□□□□ -1.57
CLK4-207ENST00000520909 ABCC3O15438 1527 aa5.25□□□□□ -1.57
CLK4-207ENST00000520909 LMTK2Q8IWU2 1503 aa5.25□□□□□ -1.57
CLK4-207ENST00000520909 PTPRTO14522 1441 aa5.25□□□□□ -1.57
CLK4-207ENST00000520909 NPATQ14207 1427 aa5.25□□□□□ -1.57
CLK4-207ENST00000520909 REREQ9P2R6 1566 aa5.25□□□□□ -1.57
CLK4-207ENST00000520909 TET3O43151 1660 aa5.24□□□□□ -1.57
CLK4-207ENST00000520909 CLSTN1O94985 981 aa5.24□□□□□ -1.57
CLK4-207ENST00000520909 ARIH2O95376 493 aa5.24□□□□□ -1.57
CLK4-207ENST00000520909 NPSP0C0P6 89 aa5.24□□□□□ -1.57
CLK4-207ENST00000520909 PRDX5P30044 214 aa5.24□□□□□ -1.57
CLK4-207ENST00000520909 IARSP41252 1262 aaKnown RBP5.24□□□□□ -1.57
CLK4-207ENST00000520909 CLCN2P51788 898 aa5.24□□□□□ -1.57
CLK4-207ENST00000520909 ZNF134P52741 427 aa5.24□□□□□ -1.57
CLK4-207ENST00000520909 DSC2Q02487 901 aa5.24□□□□□ -1.57
CLK4-207ENST00000520909 LRRC41Q15345 812 aa5.24□□□□□ -1.57
CLK4-207ENST00000520909 TBC1D25Q3MII6 688 aa5.24□□□□□ -1.57
CLK4-207ENST00000520909 NSMCE1Q8WV22 266 aa5.24□□□□□ -1.57
CLK4-207ENST00000520909 DAZAP1Q96EP5 407 aaKnown RBP5.24□□□□□ -1.57
CLK4-207ENST00000520909 C1orf43Q9BWL3 253 aa5.24□□□□□ -1.57
CLK4-207ENST00000520909 FSD1LQ9BXM9 530 aa5.24□□□□□ -1.57
CLK4-207ENST00000520909 POLHQ9Y253 713 aa5.24□□□□□ -1.57
CLK4-207ENST00000520909 BCORL1Q5H9F3 1711 aa5.24□□□□□ -1.57
CLK4-207ENST00000520909 EFCAB6Q5THR3 1501 aa5.24□□□□□ -1.57
CLK4-207ENST00000520909 E9PCH4 1651 aa5.24□□□□□ -1.57
CLK4-207ENST00000520909 POC1B-GALNT4F8VUJ3 575 aa5.23□□□□□ -1.57
CLK4-207ENST00000520909 PCDHGA12O60330 932 aa5.23□□□□□ -1.57
CLK4-207ENST00000520909 BCAR3O75815 825 aa5.23□□□□□ -1.57
CLK4-207ENST00000520909 MT-CO1P00395 513 aa5.23□□□□□ -1.57
CLK4-207ENST00000520909 IDI1Q13907 227 aa5.23□□□□□ -1.57
CLK4-207ENST00000520909 UAP1L1Q3KQV9 507 aa5.23□□□□□ -1.57
CLK4-207ENST00000520909 CERKLQ49MI3 558 aaPredicted RBP5.23□□□□□ -1.57
CLK4-207ENST00000520909 FAM160B1Q5W0V3 765 aa5.23□□□□□ -1.57
CLK4-207ENST00000520909 LAYNQ6UX15 382 aa5.23□□□□□ -1.57
CLK4-207ENST00000520909 CBARPQ8N350 705 aaPredicted RBP5.23□□□□□ -1.57
CLK4-207ENST00000520909 GALNT4Q8N4A0 578 aa5.23□□□□□ -1.57
CLK4-207ENST00000520909 RP9Q8TA86 221 aaKnown RBP5.23□□□□□ -1.57
CLK4-207ENST00000520909 PIGOQ8TEQ8 1089 aa5.23□□□□□ -1.57
CLK4-207ENST00000520909 TNPO1Q92973 898 aaKnown RBP5.23□□□□□ -1.57
CLK4-207ENST00000520909 MACROD1Q9BQ69 325 aa5.23□□□□□ -1.57
CLK4-207ENST00000520909 CCNL1Q9UK58 526 aaPredicted RBP5.23□□□□□ -1.57
CLK4-207ENST00000520909 ZDHHC8Q9ULC8 765 aa5.23□□□□□ -1.57
CLK4-207ENST00000520909 PCDHGA9Q9Y5G4 932 aaKnown RBP5.23□□□□□ -1.57
CLK4-207ENST00000520909 PCDHGA8Q9Y5G5 932 aa5.23□□□□□ -1.57
CLK4-207ENST00000520909 PCDHGA7Q9Y5G6 932 aa5.23□□□□□ -1.57
CLK4-207ENST00000520909 PCDHGA6Q9Y5G7 932 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms