RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 SOAT2O75908 522 aa18.8■□□□□ 0.6
SDC2-205ENST00000520233 C8AP07357 584 aa18.8■□□□□ 0.6
SDC2-205ENST00000520233 UNGP13051 313 aaPredicted RBP18.8■□□□□ 0.6
SDC2-205ENST00000520233 IGFBP4P22692 258 aa18.8■□□□□ 0.6
SDC2-205ENST00000520233 ALDH1A3P47895 512 aa18.8■□□□□ 0.6
SDC2-205ENST00000520233 GPR15P49685 360 aa18.8■□□□□ 0.6
SDC2-205ENST00000520233 NOMO3P69849 1222 aa18.8■□□□□ 0.6
SDC2-205ENST00000520233 PLD1Q13393 1074 aa18.8■□□□□ 0.6
SDC2-205ENST00000520233 DDR2Q16832 855 aa18.8■□□□□ 0.6
SDC2-205ENST00000520233 PIGZQ86VD9 579 aa18.8■□□□□ 0.6
SDC2-205ENST00000520233 CCDC170Q8IYT3 715 aa18.8■□□□□ 0.6
SDC2-205ENST00000520233 EFHBQ8N7U6 833 aa18.8■□□□□ 0.6
SDC2-205ENST00000520233 C1orf131Q8NDD1 294 aaKnown RBP18.8■□□□□ 0.6
SDC2-205ENST00000520233 CCDC112Q8NEF3 446 aa18.8■□□□□ 0.6
SDC2-205ENST00000520233 SLC7A14Q8TBB6 771 aa18.8■□□□□ 0.6
SDC2-205ENST00000520233 SPATA17Q96L03 361 aa18.8■□□□□ 0.6
SDC2-205ENST00000520233 MAN1C1Q9NR34 630 aa18.8■□□□□ 0.6
SDC2-205ENST00000520233 PTPRDP23468 1912 aa18.8■□□□□ 0.6
SDC2-205ENST00000520233 PLXNA3P51805 1871 aa18.8■□□□□ 0.6
SDC2-205ENST00000520233 TRIOBPQ9H2D6 2365 aa18.79■□□□□ 0.6
SDC2-205ENST00000520233 A0A087X0T9 212 aa18.79■□□□□ 0.6
SDC2-205ENST00000520233 TULP2O00295 520 aa18.79■□□□□ 0.6
SDC2-205ENST00000520233 AKR1B10O60218 316 aa18.79■□□□□ 0.6
SDC2-205ENST00000520233 ZMYND10O75800 440 aa18.79■□□□□ 0.6
SDC2-205ENST00000520233 FAM228BP0C875 321 aa18.79■□□□□ 0.6
SDC2-205ENST00000520233 GZMAP12544 262 aa18.79■□□□□ 0.6
SDC2-205ENST00000520233 ATF6P18850 670 aa18.79■□□□□ 0.6
SDC2-205ENST00000520233 GTF2F1P35269 517 aaKnown RBP eCLIP18.79■□□□□ 0.6
SDC2-205ENST00000520233 RPL34P49207 117 aaKnown RBP18.79■□□□□ 0.6
SDC2-205ENST00000520233 CENPCQ03188 943 aa18.79■□□□□ 0.6
SDC2-205ENST00000520233 SLC18A3Q16572 532 aa18.79■□□□□ 0.6
SDC2-205ENST00000520233 NAA35Q5VZE5 725 aa18.79■□□□□ 0.6
SDC2-205ENST00000520233 PPP1R2P3Q6NXS1 205 aa18.79■□□□□ 0.6
SDC2-205ENST00000520233 PMF1Q6P1K2 205 aa18.79■□□□□ 0.6
SDC2-205ENST00000520233 LLGL2Q6P1M3 1020 aa18.79■□□□□ 0.6
SDC2-205ENST00000520233 TMEM184AQ6ZMB5 413 aa18.79■□□□□ 0.6
SDC2-205ENST00000520233 Q7L0L9 218 aa18.79■□□□□ 0.6
SDC2-205ENST00000520233 KCTD13Q8WZ19 329 aa18.79■□□□□ 0.6
SDC2-205ENST00000520233 CASP10Q92851 521 aa18.79■□□□□ 0.6
SDC2-205ENST00000520233 HSFY1Q96LI6 401 aa18.79■□□□□ 0.6
SDC2-205ENST00000520233 NOX5Q96PH1 765 aa18.79■□□□□ 0.6
SDC2-205ENST00000520233 SLC4A5Q9BY07 1137 aa18.79■□□□□ 0.6
SDC2-205ENST00000520233 IGFLR1Q9H665 355 aa18.79■□□□□ 0.6
SDC2-205ENST00000520233 CYLDQ9NQC7 956 aa18.79■□□□□ 0.6
SDC2-205ENST00000520233 CYTH4Q9UIA0 394 aa18.79■□□□□ 0.6
SDC2-205ENST00000520233 SOWAHDA6NJG2 315 aa18.78■□□□□ 0.6
SDC2-205ENST00000520233 TNFRSF10BO14763 440 aa18.78■□□□□ 0.6
SDC2-205ENST00000520233 NRDCO43847 1150 aa18.78■□□□□ 0.6
SDC2-205ENST00000520233 LRG1P02750 347 aa18.78■□□□□ 0.6
SDC2-205ENST00000520233 HOXA9P31269 272 aa18.78■□□□□ 0.6
SDC2-205ENST00000520233 CYLC1P35663 651 aaPredicted RBP18.78■□□□□ 0.6
SDC2-205ENST00000520233 ACADSBP45954 432 aa18.78■□□□□ 0.6
SDC2-205ENST00000520233 KIF11P52732 1056 aa18.78■□□□□ 0.6
SDC2-205ENST00000520233 EPHB3P54753 998 aa18.78■□□□□ 0.6
SDC2-205ENST00000520233 TWF1Q12792 350 aa18.78■□□□□ 0.6
SDC2-205ENST00000520233 PDCLQ13371 301 aa18.78■□□□□ 0.6
SDC2-205ENST00000520233 RAB41Q5JT25 222 aa18.78■□□□□ 0.6
SDC2-205ENST00000520233 PPM1LQ5SGD2 360 aa18.78■□□□□ 0.6
SDC2-205ENST00000520233 SDHAF4Q5VUM1 108 aa18.78■□□□□ 0.6
SDC2-205ENST00000520233 ACAD10Q6JQN1 1059 aa18.78■□□□□ 0.6
SDC2-205ENST00000520233 VN1R2Q8NFZ6 395 aa18.78■□□□□ 0.6
SDC2-205ENST00000520233 CPA5Q8WXQ8 436 aa18.78■□□□□ 0.6
SDC2-205ENST00000520233 CDX2Q99626 313 aaPredicted RBP18.78■□□□□ 0.6
SDC2-205ENST00000520233 DZANK1Q9NVP4 752 aa18.78■□□□□ 0.6
SDC2-205ENST00000520233 NAGPAQ9UK23 515 aa18.78■□□□□ 0.6
SDC2-205ENST00000520233 CHD9Q3L8U1 2897 aa18.78■□□□□ 0.6
SDC2-205ENST00000520233 NCK2O43639 380 aa18.77■□□□□ 0.6
SDC2-205ENST00000520233 HNRNPA1P09651 372 aaKnown RBP eCLIP18.77■□□□□ 0.6
SDC2-205ENST00000520233 SRGAP2BP0DMP2 458 aa18.77■□□□□ 0.6
SDC2-205ENST00000520233 NSFP46459 744 aaKnown RBP18.77■□□□□ 0.6
SDC2-205ENST00000520233 RGS7P49802 495 aa18.77■□□□□ 0.6
SDC2-205ENST00000520233 SNX16P57768 344 aa18.77■□□□□ 0.6
SDC2-205ENST00000520233 GFPT1Q06210 699 aaPredicted RBP18.77■□□□□ 0.6
SDC2-205ENST00000520233 ADAM15Q13444 863 aa18.77■□□□□ 0.6
SDC2-205ENST00000520233 VEPH1Q14D04 833 aa18.77■□□□□ 0.6
SDC2-205ENST00000520233 ALKBH5Q6P6C2 394 aaKnown RBP18.77■□□□□ 0.6
SDC2-205ENST00000520233 TMEM110Q86TL2 294 aa18.77■□□□□ 0.6
SDC2-205ENST00000520233 ERICH1Q86X53 443 aa18.77■□□□□ 0.6
SDC2-205ENST00000520233 NUP93Q8N1F7 819 aa18.77■□□□□ 0.6
SDC2-205ENST00000520233 DEFB123Q8N688 67 aa18.77■□□□□ 0.6
SDC2-205ENST00000520233 MSANTD4Q8NCY6 345 aa18.77■□□□□ 0.6
SDC2-205ENST00000520233 GIPC2Q8TF65 315 aa18.77■□□□□ 0.6
SDC2-205ENST00000520233 PPP1R13BQ96KQ4 1090 aa18.77■□□□□ 0.6
SDC2-205ENST00000520233 LRRC4Q9HBW1 653 aa18.77■□□□□ 0.6
SDC2-205ENST00000520233 ST7Q9NRC1 585 aa18.77■□□□□ 0.6
SDC2-205ENST00000520233 COMMD8Q9NX08 183 aa18.77■□□□□ 0.6
SDC2-205ENST00000520233 ZDHHC7Q9NXF8 308 aa18.77■□□□□ 0.6
SDC2-205ENST00000520233 TAS2R14Q9NYV8 317 aa18.77■□□□□ 0.6
SDC2-205ENST00000520233 NENFQ9UMX5 172 aa18.77■□□□□ 0.6
SDC2-205ENST00000520233 ASB3Q9Y575 518 aa18.77■□□□□ 0.6
SDC2-205ENST00000520233 SLC38A8A6NNN8 435 aa18.76■□□□□ 0.59
SDC2-205ENST00000520233 RTN2O75298 545 aa18.76■□□□□ 0.59
SDC2-205ENST00000520233 RTN3O95197 1032 aaPredicted RBP18.76■□□□□ 0.59
SDC2-205ENST00000520233 CSH1P0DML2 217 aa18.76■□□□□ 0.59
SDC2-205ENST00000520233 CSH2P0DML3 217 aa18.76■□□□□ 0.59
SDC2-205ENST00000520233 MMP8P22894 467 aa18.76■□□□□ 0.59
SDC2-205ENST00000520233 SLC5A3P53794 718 aa18.76■□□□□ 0.59
SDC2-205ENST00000520233 RBM10P98175 930 aaKnown RBP18.76■□□□□ 0.59
SDC2-205ENST00000520233 PTPN20Q4JDL3 420 aa18.76■□□□□ 0.59
SDC2-205ENST00000520233 CCDC122Q5T0U0 273 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms