RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 CCDC142Q17RM4 750 aa13.29□□□□□ -0.28
TRAPPC9-206ENST00000519482 KNOP1Q1ED39 458 aaKnown RBP13.29□□□□□ -0.28
TRAPPC9-206ENST00000519482 WDR44Q5JSH3 913 aa13.29□□□□□ -0.28
TRAPPC9-206ENST00000519482 CC2D1AQ6P1N0 951 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC9-206ENST00000519482 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC9-206ENST00000519482 SCN4BQ8IWT1 228 aa13.29□□□□□ -0.28
TRAPPC9-206ENST00000519482 STKLD1Q8NE28 680 aa13.29□□□□□ -0.28
TRAPPC9-206ENST00000519482 GOLGA5Q8TBA6 731 aa13.29□□□□□ -0.28
TRAPPC9-206ENST00000519482 MYCBPAPQ8TBZ2 947 aa13.29□□□□□ -0.28
TRAPPC9-206ENST00000519482 CCDC127Q96BQ5 260 aa13.29□□□□□ -0.28
TRAPPC9-206ENST00000519482 MMS19Q96T76 1030 aa13.29□□□□□ -0.28
TRAPPC9-206ENST00000519482 SLC39A2Q9NP94 309 aa13.29□□□□□ -0.28
TRAPPC9-206ENST00000519482 CRTAC1Q9NQ79 661 aa13.29□□□□□ -0.28
TRAPPC9-206ENST00000519482 HPS4Q9NQG7 708 aa13.29□□□□□ -0.28
TRAPPC9-206ENST00000519482 RBM12Q9NTZ6 932 aaKnown RBP13.29□□□□□ -0.28
TRAPPC9-206ENST00000519482 EHD2Q9NZN4 543 aa13.29□□□□□ -0.28
TRAPPC9-206ENST00000519482 DCHS1Q96JQ0 3298 aa13.29□□□□□ -0.28
TRAPPC9-206ENST00000519482 KIAA1549LQ6ZVL6 1849 aa13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 MYO16Q9Y6X6 1858 aa13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 TRAV19A0A0A6YYK7 116 aa13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 TRDMT1O14717 391 aaKnown RBP13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 PDGFRBP09619 1106 aa13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 SLFN14P0C7P3 912 aa13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 PFKLP17858 780 aa13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 HOXA6P31267 233 aa13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 ATICP31939 592 aa13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 GNL1P36915 607 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 PDE6CP51160 858 aa13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 PSMC1P62191 440 aaKnown RBP13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 TNNC1P63316 161 aa13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 PSMD2Q13200 908 aa13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 TRPC3Q13507 836 aa13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 IQCB1Q15051 598 aa13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 PDGFRLQ15198 375 aa13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 WDR72Q3MJ13 1102 aa13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 SARM1Q6SZW1 724 aa13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 Q6ZS52 159 aa13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 TMEM174Q8WUU8 243 aa13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 MYLPFQ96A32 169 aa13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 EXOC4Q96A65 974 aa13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 RMDN1Q96DB5 314 aa13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 SNX25Q9H3E2 840 aa13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 EBF3Q9H4W6 596 aa13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 SERTAD1Q9UHV2 236 aa13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 RAB23Q9ULC3 237 aa13.28□□□□□ -0.28
TRAPPC9-206ENST00000519482 ATG2BQ96BY7 2078 aa13.27□□□□□ -0.28
TRAPPC9-206ENST00000519482 K7ESF4 209 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 TRIM66O15016 1216 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 KLRC4O43908 158 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 EXOC3O60645 756 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 SMC2O95347 1197 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 MYL1P05976 194 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 PTMAP06454 111 aaKnown RBP13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 CKMP06732 381 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 TCF3P15923 654 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 BDNFP23560 247 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 ANXA13P27216 316 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 GRIK1P39086 918 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 AP3M2P53677 418 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 CYP27A1Q02318 531 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 GRSF1Q12849 480 aaKnown RBP eCLIP13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 PUM1Q14671 1186 aaKnown RBP eCLIP13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 MTF1Q14872 753 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 ZNF77Q15935 545 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 TMEM196Q5HYL7 178 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 TRIM68Q6AZZ1 485 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 LAIR1Q6GTX8 287 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 DENND5BQ6ZUT9 1274 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 LONP2Q86WA8 852 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 TRIML1Q8N9V2 468 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 OR6B3Q8NGW1 331 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 OSCP1Q8WVF1 389 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 ZNF516Q92618 1163 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 PCED1BQ96HM7 432 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 CYP2S1Q96SQ9 504 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 MRPL45Q9BRJ2 306 aaKnown RBP13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 TRPC7Q9HCX4 862 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 GCNT4Q9P109 453 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 GMEB2Q9UKD1 530 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 DNAH14Q0VDD8 3507 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 SPAG17Q6Q759 2223 aa13.27□□□□□ -0.29
TRAPPC9-206ENST00000519482 OTOL1A6NHN0 477 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC9-206ENST00000519482 IKBKBO14920 756 aa13.26□□□□□ -0.29
TRAPPC9-206ENST00000519482 ACTN4O43707 911 aaKnown RBP13.26□□□□□ -0.29
TRAPPC9-206ENST00000519482 ATG13O75143 517 aa13.26□□□□□ -0.29
TRAPPC9-206ENST00000519482 PTPN1P18031 435 aaKnown RBP13.26□□□□□ -0.29
TRAPPC9-206ENST00000519482 DRD1P21728 446 aa13.26□□□□□ -0.29
TRAPPC9-206ENST00000519482 SDHBP21912 280 aa13.26□□□□□ -0.29
TRAPPC9-206ENST00000519482 MYH10P35580 1976 aa13.26□□□□□ -0.29
TRAPPC9-206ENST00000519482 PPP3CCP48454 512 aa13.26□□□□□ -0.29
TRAPPC9-206ENST00000519482 NOP14P78316 857 aaKnown RBP13.26□□□□□ -0.29
TRAPPC9-206ENST00000519482 USP4Q13107 963 aa13.26□□□□□ -0.29
TRAPPC9-206ENST00000519482 KCNB1Q14721 858 aa13.26□□□□□ -0.29
TRAPPC9-206ENST00000519482 MDH1BQ5I0G3 518 aa13.26□□□□□ -0.29
TRAPPC9-206ENST00000519482 LUZP1Q86V48 1076 aa13.26□□□□□ -0.29
TRAPPC9-206ENST00000519482 SLC9A9Q8IVB4 645 aa13.26□□□□□ -0.29
TRAPPC9-206ENST00000519482 GRAMD1CQ8IYS0 662 aa13.26□□□□□ -0.29
TRAPPC9-206ENST00000519482 CPA6Q8N4T0 437 aa13.26□□□□□ -0.29
TRAPPC9-206ENST00000519482 RIN3Q8TB24 985 aa13.26□□□□□ -0.29
TRAPPC9-206ENST00000519482 PARD3BQ8TEW8 1205 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms