RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 HSPBP1Q9NZL4 362 aa19.66■□□□□ 0.74
SPOP-220ENST00000515508 NUP205Q92621 2012 aa19.66■□□□□ 0.74
SPOP-220ENST00000515508 EIF3DO15371 548 aaKnown RBP eCLIP19.65■□□□□ 0.74
SPOP-220ENST00000515508 HOXD13P35453 343 aa19.65■□□□□ 0.74
SPOP-220ENST00000515508 OPRD1P41143 372 aa19.65■□□□□ 0.74
SPOP-220ENST00000515508 NASPP49321 788 aaPredicted RBP19.65■□□□□ 0.74
SPOP-220ENST00000515508 NOP14P78316 857 aaKnown RBP19.65■□□□□ 0.74
SPOP-220ENST00000515508 ELF2Q15723 593 aa19.65■□□□□ 0.74
SPOP-220ENST00000515508 ST3GAL2Q16842 350 aa19.65■□□□□ 0.74
SPOP-220ENST00000515508 GAB4Q2WGN9 574 aa19.65■□□□□ 0.74
SPOP-220ENST00000515508 MYCBPAPQ8TBZ2 947 aa19.65■□□□□ 0.74
SPOP-220ENST00000515508 LINC00597Q9H2U6 94 aa19.65■□□□□ 0.74
SPOP-220ENST00000515508 KIAA1586Q9HCI6 787 aa19.65■□□□□ 0.74
SPOP-220ENST00000515508 KBTBD4Q9NVX7 518 aa19.65■□□□□ 0.74
SPOP-220ENST00000515508 CFAP47Q6ZTR5 3102 aa19.64■□□□□ 0.73
SPOP-220ENST00000515508 TRIM66O15016 1216 aa19.64■□□□□ 0.73
SPOP-220ENST00000515508 DCLK1O15075 740 aa19.64■□□□□ 0.73
SPOP-220ENST00000515508 RHOBTB1O94844 696 aa19.64■□□□□ 0.73
SPOP-220ENST00000515508 OLFM2O95897 454 aa19.64■□□□□ 0.73
SPOP-220ENST00000515508 KCNA4P22459 653 aa19.64■□□□□ 0.73
SPOP-220ENST00000515508 ANXA13P27216 316 aa19.64■□□□□ 0.73
SPOP-220ENST00000515508 GRIK1P39086 918 aa19.64■□□□□ 0.73
SPOP-220ENST00000515508 SLC7A9P82251 487 aa19.64■□□□□ 0.73
SPOP-220ENST00000515508 CYP27A1Q02318 531 aa19.64■□□□□ 0.73
SPOP-220ENST00000515508 PSMD2Q13200 908 aa19.64■□□□□ 0.73
SPOP-220ENST00000515508 E2F4Q16254 413 aa19.64■□□□□ 0.73
SPOP-220ENST00000515508 TCEAL6Q6IPX3 200 aa19.64■□□□□ 0.73
SPOP-220ENST00000515508 TRAPPC11Q7Z392 1133 aa19.64■□□□□ 0.73
SPOP-220ENST00000515508 PDILTQ8N807 584 aa19.64■□□□□ 0.73
SPOP-220ENST00000515508 USP33Q8TEY7 942 aa19.64■□□□□ 0.73
SPOP-220ENST00000515508 TCEAL3Q969E4 200 aa19.64■□□□□ 0.73
SPOP-220ENST00000515508 HPS3Q969F9 1004 aa19.64■□□□□ 0.73
SPOP-220ENST00000515508 LSM14BQ9BX40 385 aaKnown RBP19.64■□□□□ 0.73
SPOP-220ENST00000515508 TRIM9Q9C026 710 aa19.64■□□□□ 0.73
SPOP-220ENST00000515508 EHD2Q9NZN4 543 aa19.64■□□□□ 0.73
SPOP-220ENST00000515508 TRPM5Q9NZQ8 1165 aa19.64■□□□□ 0.73
SPOP-220ENST00000515508 ANGPTL2Q9UKU9 493 aa19.64■□□□□ 0.73
SPOP-220ENST00000515508 MTMR6Q9Y217 621 aa19.64■□□□□ 0.73
SPOP-220ENST00000515508 NME7Q9Y5B8 376 aa19.64■□□□□ 0.73
SPOP-220ENST00000515508 FRYQ5TBA9 3013 aa19.63■□□□□ 0.73
SPOP-220ENST00000515508 BCLAF3A2AJT9 711 aaKnown RBP19.63■□□□□ 0.73
SPOP-220ENST00000515508 ZNF840PA6NDX5 716 aa19.63■□□□□ 0.73
SPOP-220ENST00000515508 K7EQS6 105 aa19.63■□□□□ 0.73
SPOP-220ENST00000515508 LEFTY2O00292 366 aa19.63■□□□□ 0.73
SPOP-220ENST00000515508 TACC1O75410 805 aa19.63■□□□□ 0.73
SPOP-220ENST00000515508 PPP3CCP48454 512 aa19.63■□□□□ 0.73
SPOP-220ENST00000515508 SHC2P98077 582 aa19.63■□□□□ 0.73
SPOP-220ENST00000515508 N4BP2L1Q5TBK1 243 aaPredicted RBP19.63■□□□□ 0.73
SPOP-220ENST00000515508 EPM2AIP1Q7L775 607 aaPredicted RBP19.63■□□□□ 0.73
SPOP-220ENST00000515508 C11orf74Q86VG3 221 aa19.63■□□□□ 0.73
SPOP-220ENST00000515508 RASSF3Q86WH2 238 aa19.63■□□□□ 0.73
SPOP-220ENST00000515508 TSTD1Q8NFU3 115 aa19.63■□□□□ 0.73
SPOP-220ENST00000515508 INTS4Q96HW7 963 aaKnown RBP19.63■□□□□ 0.73
SPOP-220ENST00000515508 C8orf48Q96LL4 319 aa19.63■□□□□ 0.73
SPOP-220ENST00000515508 MMS19Q96T76 1030 aa19.63■□□□□ 0.73
SPOP-220ENST00000515508 MRPL45Q9BRJ2 306 aaKnown RBP19.63■□□□□ 0.73
SPOP-220ENST00000515508 LRRC27Q9C0I9 530 aa19.63■□□□□ 0.73
SPOP-220ENST00000515508 CUEDC2Q9H467 287 aa19.63■□□□□ 0.73
SPOP-220ENST00000515508 ZSCAN16Q9H4T2 348 aaPredicted RBP19.63■□□□□ 0.73
SPOP-220ENST00000515508 CHD6Q8TD26 2715 aa19.62■□□□□ 0.73
SPOP-220ENST00000515508 F8VP50 259 aa19.62■□□□□ 0.73
SPOP-220ENST00000515508 CYP17A1P05093 508 aa19.62■□□□□ 0.73
SPOP-220ENST00000515508 PDGFRBP09619 1106 aa19.62■□□□□ 0.73
SPOP-220ENST00000515508 SNRNP35Q16560 246 aaKnown RBP19.62■□□□□ 0.73
SPOP-220ENST00000515508 MDH1BQ5I0G3 518 aa19.62■□□□□ 0.73
SPOP-220ENST00000515508 PMS2CLQ68D20 193 aa19.62■□□□□ 0.73
SPOP-220ENST00000515508 RNF43Q68DV7 783 aa19.62■□□□□ 0.73
SPOP-220ENST00000515508 CNNM4Q6P4Q7 775 aa19.62■□□□□ 0.73
SPOP-220ENST00000515508 CNOT6LQ96LI5 555 aaKnown RBP19.62■□□□□ 0.73
SPOP-220ENST00000515508 EDEM2Q9BV94 578 aa19.62■□□□□ 0.73
SPOP-220ENST00000515508 MMP17Q9ULZ9 603 aa19.62■□□□□ 0.73
SPOP-220ENST00000515508 UBE4BO95155 1302 aa19.61■□□□□ 0.73
SPOP-220ENST00000515508 TGFB1I1O43294 461 aa19.61■□□□□ 0.73
SPOP-220ENST00000515508 CAVIN2O95810 425 aa19.61■□□□□ 0.73
SPOP-220ENST00000515508 OAS1P00973 400 aaKnown RBP19.61■□□□□ 0.73
SPOP-220ENST00000515508 FAM163BP0C2L3 166 aa19.61■□□□□ 0.73
SPOP-220ENST00000515508 CHRM1P11229 460 aaPredicted RBP19.61■□□□□ 0.73
SPOP-220ENST00000515508 DGKEP52429 567 aa19.61■□□□□ 0.73
SPOP-220ENST00000515508 CREB5Q02930 508 aa19.61■□□□□ 0.73
SPOP-220ENST00000515508 FILIP1Q7Z7B0 1213 aa19.61■□□□□ 0.73
SPOP-220ENST00000515508 LINC00301Q8NCQ3 95 aa19.61■□□□□ 0.73
SPOP-220ENST00000515508 ZNF507Q8TCN5 953 aa19.61■□□□□ 0.73
SPOP-220ENST00000515508 CGRRF1Q99675 332 aa19.61■□□□□ 0.73
SPOP-220ENST00000515508 RNF38Q9H0F5 515 aa19.61■□□□□ 0.73
SPOP-220ENST00000515508 AGPAT3Q9NRZ7 376 aa19.61■□□□□ 0.73
SPOP-220ENST00000515508 TMEM30AQ9NV96 361 aa19.61■□□□□ 0.73
SPOP-220ENST00000515508 ABCA7Q8IZY2 2146 aa19.61■□□□□ 0.73
SPOP-220ENST00000515508 THADAQ6YHU6 1953 aa19.61■□□□□ 0.73
SPOP-220ENST00000515508 PLXND1Q9Y4D7 1925 aa19.61■□□□□ 0.73
SPOP-220ENST00000515508 TNRC6BQ9UPQ9 1833 aaKnown RBP19.6■□□□□ 0.73
SPOP-220ENST00000515508 LNP1A1A4G5 178 aa19.6■□□□□ 0.73
SPOP-220ENST00000515508 KCNK5O95279 499 aa19.6■□□□□ 0.73
SPOP-220ENST00000515508 STAU1O95793 577 aaKnown RBP19.6■□□□□ 0.73
SPOP-220ENST00000515508 CST3P01034 146 aaPredicted RBP19.6■□□□□ 0.73
SPOP-220ENST00000515508 DLATP10515 647 aaKnown RBP19.6■□□□□ 0.73
SPOP-220ENST00000515508 GNL1P36915 607 aaPredicted RBP19.6■□□□□ 0.73
SPOP-220ENST00000515508 EIF2DP41214 584 aaKnown RBP19.6■□□□□ 0.73
SPOP-220ENST00000515508 CACNA2D1P54289 1103 aa19.6■□□□□ 0.73
SPOP-220ENST00000515508 PSMD6Q15008 389 aa19.6■□□□□ 0.73
SPOP-220ENST00000515508 USP39Q53GS9 565 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms