RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 ABCF2Q9UG63 623 aa4.87□□□□□ -1.63
NEDD4-211ENST00000514893 FEZ2Q9UHY8 353 aaPredicted RBP4.87□□□□□ -1.63
NEDD4-211ENST00000514893 MCM8Q9UJA3 840 aa4.87□□□□□ -1.63
NEDD4-211ENST00000514893 NDRG4Q9ULP0 352 aaKnown RBP4.87□□□□□ -1.63
NEDD4-211ENST00000514893 SHOC2Q9UQ13 582 aa4.87□□□□□ -1.63
NEDD4-211ENST00000514893 MT-CO1P00395 513 aa4.86□□□□□ -1.63
NEDD4-211ENST00000514893 MT3P25713 68 aa4.86□□□□□ -1.63
NEDD4-211ENST00000514893 HTR6P50406 440 aa4.86□□□□□ -1.63
NEDD4-211ENST00000514893 HK3P52790 923 aa4.86□□□□□ -1.63
NEDD4-211ENST00000514893 SRSF1Q07955 248 aaKnown RBP eCLIP4.86□□□□□ -1.63
NEDD4-211ENST00000514893 NOGQ13253 232 aa4.86□□□□□ -1.63
NEDD4-211ENST00000514893 KRTAP27-1Q3LI81 207 aa4.86□□□□□ -1.63
NEDD4-211ENST00000514893 ANO7Q6IWH7 933 aa4.86□□□□□ -1.63
NEDD4-211ENST00000514893 DEF8Q6ZN54 512 aa4.86□□□□□ -1.63
NEDD4-211ENST00000514893 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.86□□□□□ -1.63
NEDD4-211ENST00000514893 HS3ST3B1Q9Y662 390 aa4.86□□□□□ -1.63
NEDD4-211ENST00000514893 TULP3O75386 442 aa4.85□□□□□ -1.63
NEDD4-211ENST00000514893 MYBL2P10244 700 aa4.85□□□□□ -1.63
NEDD4-211ENST00000514893 TGFB3P10600 412 aa4.85□□□□□ -1.63
NEDD4-211ENST00000514893 PSG1P11464 419 aa4.85□□□□□ -1.63
NEDD4-211ENST00000514893 LRPAP1P30533 357 aa4.85□□□□□ -1.63
NEDD4-211ENST00000514893 PDE6CP51160 858 aa4.85□□□□□ -1.63
NEDD4-211ENST00000514893 ID2Q02363 134 aa4.85□□□□□ -1.63
NEDD4-211ENST00000514893 Q6ZTC4 211 aa4.85□□□□□ -1.63
NEDD4-211ENST00000514893 NECAB2Q7Z6G3 386 aa4.85□□□□□ -1.63
NEDD4-211ENST00000514893 SFTPA1Q8IWL2 248 aa4.85□□□□□ -1.63
NEDD4-211ENST00000514893 ADHFE1Q8IWW8 467 aa4.85□□□□□ -1.63
NEDD4-211ENST00000514893 SIRT6Q8N6T7 355 aa4.85□□□□□ -1.63
NEDD4-211ENST00000514893 ZBTB8BQ8NAP8 495 aaPredicted RBP4.85□□□□□ -1.63
NEDD4-211ENST00000514893 OSR1Q8TAX0 266 aaPredicted RBP4.85□□□□□ -1.63
NEDD4-211ENST00000514893 OSCP1Q8WVF1 389 aa4.85□□□□□ -1.63
NEDD4-211ENST00000514893 TRMT13Q9NUP7 481 aaKnown RBP4.85□□□□□ -1.63
NEDD4-211ENST00000514893 SERPINB13Q9UIV8 391 aa4.85□□□□□ -1.63
NEDD4-211ENST00000514893 AMFRQ9UKV5 643 aa4.85□□□□□ -1.63
NEDD4-211ENST00000514893 PROCRQ9UNN8 238 aa4.85□□□□□ -1.63
NEDD4-211ENST00000514893 CACNA1IQ9P0X4 2223 aa4.84□□□□□ -1.63
NEDD4-211ENST00000514893 AP4M1O00189 453 aa4.84□□□□□ -1.63
NEDD4-211ENST00000514893 KRT86O43790 486 aa4.84□□□□□ -1.63
NEDD4-211ENST00000514893 TLR2O60603 784 aa4.84□□□□□ -1.63
NEDD4-211ENST00000514893 CDKN2AP42771 156 aaKnown RBP4.84□□□□□ -1.63
NEDD4-211ENST00000514893 KRT81Q14533 505 aa4.84□□□□□ -1.63
NEDD4-211ENST00000514893 RNASE12Q5GAN4 147 aaKnown RBP4.84□□□□□ -1.63
NEDD4-211ENST00000514893 UBAP2Q5T6F2 1119 aaKnown RBP4.84□□□□□ -1.63
NEDD4-211ENST00000514893 SYDE2Q5VT97 1194 aa4.84□□□□□ -1.63
NEDD4-211ENST00000514893 BCDIN3DQ7Z5W3 292 aaKnown RBP4.84□□□□□ -1.63
NEDD4-211ENST00000514893 SLC15A3Q8IY34 581 aa4.84□□□□□ -1.63
NEDD4-211ENST00000514893 ARFGAP1Q8N6T3 406 aa4.84□□□□□ -1.63
NEDD4-211ENST00000514893 RBMXL3Q8N7X1 1067 aaKnown RBP4.84□□□□□ -1.63
NEDD4-211ENST00000514893 CTAGE1Q96RT6 745 aa4.84□□□□□ -1.63
NEDD4-211ENST00000514893 TRMOQ9BU70 441 aa4.84□□□□□ -1.63
NEDD4-211ENST00000514893 HEY2Q9UBP5 337 aa4.84□□□□□ -1.63
NEDD4-211ENST00000514893 PLEKHM1Q9Y4G2 1056 aa4.84□□□□□ -1.63
NEDD4-211ENST00000514893 SHTN1A0MZ66 631 aa4.83□□□□□ -1.64
NEDD4-211ENST00000514893 B4DGG1 531 aa4.83□□□□□ -1.64
NEDD4-211ENST00000514893 MT-CO3P00414 261 aa4.83□□□□□ -1.64
NEDD4-211ENST00000514893 AHSGP02765 367 aa4.83□□□□□ -1.64
NEDD4-211ENST00000514893 FPR3P25089 353 aa4.83□□□□□ -1.64
NEDD4-211ENST00000514893 VIPR2P41587 438 aa4.83□□□□□ -1.64
NEDD4-211ENST00000514893 E2F1Q01094 437 aa4.83□□□□□ -1.64
NEDD4-211ENST00000514893 DEPDC1Q5TB30 811 aa4.83□□□□□ -1.64
NEDD4-211ENST00000514893 DAB2IPQ5VWQ8 1189 aa4.83□□□□□ -1.64
NEDD4-211ENST00000514893 COLCA1Q6ZS62 124 aa4.83□□□□□ -1.64
NEDD4-211ENST00000514893 PIP4P1Q86T03 277 aa4.83□□□□□ -1.64
NEDD4-211ENST00000514893 PNMA8AQ86V59 439 aaPredicted RBP4.83□□□□□ -1.64
NEDD4-211ENST00000514893 CAND1Q86VP6 1230 aaKnown RBP4.83□□□□□ -1.64
NEDD4-211ENST00000514893 PPP1R3BQ86XI6 285 aa4.83□□□□□ -1.64
NEDD4-211ENST00000514893 ANKRD13BQ86YJ7 626 aa4.83□□□□□ -1.64
NEDD4-211ENST00000514893 MIER2Q8N344 545 aa4.83□□□□□ -1.64
NEDD4-211ENST00000514893 MAP4K1Q92918 833 aa4.83□□□□□ -1.64
NEDD4-211ENST00000514893 RSPRY1Q96DX4 576 aa4.83□□□□□ -1.64
NEDD4-211ENST00000514893 FAM234AQ9H0X4 552 aa4.83□□□□□ -1.64
NEDD4-211ENST00000514893 LMBRD1Q9NUN5 540 aa4.83□□□□□ -1.64
NEDD4-211ENST00000514893 MAFFQ9ULX9 164 aa4.83□□□□□ -1.64
NEDD4-211ENST00000514893 PCDHA1Q9Y5I3 950 aa4.83□□□□□ -1.64
NEDD4-211ENST00000514893 CYSRT1A8MQ03 144 aa4.82□□□□□ -1.64
NEDD4-211ENST00000514893 FGAP02671 866 aa4.82□□□□□ -1.64
NEDD4-211ENST00000514893 CYP2C9P11712 490 aa4.82□□□□□ -1.64
NEDD4-211ENST00000514893 TYRP14679 529 aa4.82□□□□□ -1.64
NEDD4-211ENST00000514893 PCBP2Q15366 365 aaKnown RBP eCLIP4.82□□□□□ -1.64
NEDD4-211ENST00000514893 EMC10Q5UCC4 262 aa4.82□□□□□ -1.64
NEDD4-211ENST00000514893 C18orf65Q6ZTR6 163 aa4.82□□□□□ -1.64
NEDD4-211ENST00000514893 USP43Q70EL4 1123 aa4.82□□□□□ -1.64
NEDD4-211ENST00000514893 LIX1LQ8IVB5 337 aa4.82□□□□□ -1.64
NEDD4-211ENST00000514893 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.82□□□□□ -1.642e-6■■■□□ 17.5
NEDD4-211ENST00000514893 IZUMO1Q8IYV9 350 aa4.82□□□□□ -1.64
NEDD4-211ENST00000514893 PCSK9Q8NBP7 692 aaKnown RBP4.82□□□□□ -1.64
NEDD4-211ENST00000514893 MPLKIPQ8TAP9 179 aa4.82□□□□□ -1.64
NEDD4-211ENST00000514893 ZFYVE19Q96K21 471 aa4.82□□□□□ -1.64
NEDD4-211ENST00000514893 TMEM184CQ9NVA4 438 aa4.82□□□□□ -1.64
NEDD4-211ENST00000514893 PNPOQ9NVS9 261 aa4.82□□□□□ -1.64
NEDD4-211ENST00000514893 ICKQ9UPZ9 632 aa4.82□□□□□ -1.64
NEDD4-211ENST00000514893 ERVV-2B6SEH9 535 aa4.81□□□□□ -1.64
NEDD4-211ENST00000514893 hCG_1984214I3L0E3 225 aa4.81□□□□□ -1.64
NEDD4-211ENST00000514893 PSMD9O00233 223 aa4.81□□□□□ -1.64
NEDD4-211ENST00000514893 DTNBO60941 627 aa4.81□□□□□ -1.64
NEDD4-211ENST00000514893 CNOT3O75175 753 aaKnown RBP4.81□□□□□ -1.64
NEDD4-211ENST00000514893 XRCC6P12956 609 aaKnown RBP eCLIP4.81□□□□□ -1.64
NEDD4-211ENST00000514893 RPS13P62277 151 aaKnown RBP4.81□□□□□ -1.64
NEDD4-211ENST00000514893 EXOSC9Q06265 439 aaKnown RBP4.81□□□□□ -1.64
NEDD4-211ENST00000514893 RAB11FIP4Q86YS3 637 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms