RNA–Protein interactions for RNA: ENST00000513453.5

SIL1-214, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 5

Gene SIL1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-214ENST00000513453 SMYD3Q9H7B4 428 aa16.79■□□□□ 0.28
SIL1-214ENST00000513453 POLR3BQ9NW08 1133 aaPredicted RBP16.79■□□□□ 0.28
SIL1-214ENST00000513453 CGNQ9P2M7 1197 aaKnown RBP16.79■□□□□ 0.28
SIL1-214ENST00000513453 NXF1Q9UBU9 619 aaKnown RBP16.79■□□□□ 0.28
SIL1-214ENST00000513453 HPSEQ9Y251 543 aa16.79■□□□□ 0.28
SIL1-214ENST00000513453 SPAG17Q6Q759 2223 aa16.78■□□□□ 0.28
SIL1-214ENST00000513453 CLDN5O00501 218 aa16.78■□□□□ 0.28
SIL1-214ENST00000513453 VNN1O95497 513 aa16.78■□□□□ 0.28
SIL1-214ENST00000513453 EGFP01133 1207 aa16.78■□□□□ 0.28
SIL1-214ENST00000513453 C4BPAP04003 597 aaKnown RBP16.78■□□□□ 0.28
SIL1-214ENST00000513453 PRR29P0C7W0 189 aa16.78■□□□□ 0.28
SIL1-214ENST00000513453 CMA1P23946 247 aa16.78■□□□□ 0.28
SIL1-214ENST00000513453 GJA4P35212 333 aa16.78■□□□□ 0.28
SIL1-214ENST00000513453 RAP1GAPP47736 663 aa16.78■□□□□ 0.28
SIL1-214ENST00000513453 TNNC1P63316 161 aa16.78■□□□□ 0.28
SIL1-214ENST00000513453 DLG4P78352 724 aa16.78■□□□□ 0.28
SIL1-214ENST00000513453 TRPC3Q13507 836 aa16.78■□□□□ 0.28
SIL1-214ENST00000513453 MAPRE1Q15691 268 aaKnown RBP16.78■□□□□ 0.28
SIL1-214ENST00000513453 CC2D1AQ6P1N0 951 aaPredicted RBP16.78■□□□□ 0.28
SIL1-214ENST00000513453 DENND5BQ6ZUT9 1274 aa16.78■□□□□ 0.28
SIL1-214ENST00000513453 SYNPOQ8N3V7 929 aa16.78■□□□□ 0.28
SIL1-214ENST00000513453 SH3RF2Q8TEC5 729 aa16.78■□□□□ 0.28
SIL1-214ENST00000513453 OSCP1Q8WVF1 389 aa16.78■□□□□ 0.28
SIL1-214ENST00000513453 EZH1Q92800 747 aaPredicted RBP16.78■□□□□ 0.28
SIL1-214ENST00000513453 TTLL2Q9BWV7 592 aa16.78■□□□□ 0.28
SIL1-214ENST00000513453 SDCBP2Q9H190 292 aa16.78■□□□□ 0.28
SIL1-214ENST00000513453 LINC00597Q9H2U6 94 aa16.78■□□□□ 0.28
SIL1-214ENST00000513453 ECT2Q9H8V3 914 aa16.78■□□□□ 0.28
SIL1-214ENST00000513453 EXOC1Q9NV70 894 aa16.78■□□□□ 0.28
SIL1-214ENST00000513453 DUS2Q9NX74 493 aaKnown RBP16.78■□□□□ 0.28
SIL1-214ENST00000513453 FAM163BP0C2L3 166 aa16.77■□□□□ 0.28
SIL1-214ENST00000513453 HDCP19113 662 aa16.77■□□□□ 0.28
SIL1-214ENST00000513453 GALK1P51570 392 aa16.77■□□□□ 0.28
SIL1-214ENST00000513453 CLDN10P78369 228 aa16.77■□□□□ 0.28
SIL1-214ENST00000513453 PDGFRLQ15198 375 aa16.77■□□□□ 0.28
SIL1-214ENST00000513453 EML3Q32P44 896 aa16.77■□□□□ 0.28
SIL1-214ENST00000513453 PRR23BQ6ZRT6 265 aa16.77■□□□□ 0.28
SIL1-214ENST00000513453 ERMP1Q7Z2K6 904 aa16.77■□□□□ 0.28
SIL1-214ENST00000513453 FSIP1Q8NA03 581 aa16.77■□□□□ 0.28
SIL1-214ENST00000513453 C8orf48Q96LL4 319 aa16.77■□□□□ 0.28
SIL1-214ENST00000513453 RNF38Q9H0F5 515 aa16.77■□□□□ 0.28
SIL1-214ENST00000513453 DLL3Q9NYJ7 618 aa16.77■□□□□ 0.28
SIL1-214ENST00000513453 ZNF840PA6NDX5 716 aa16.76■□□□□ 0.27
SIL1-214ENST00000513453 A8MXQ7 604 aa16.76■□□□□ 0.27
SIL1-214ENST00000513453 TRIM66O15016 1216 aa16.76■□□□□ 0.27
SIL1-214ENST00000513453 PHACTR2O75167 634 aa16.76■□□□□ 0.27
SIL1-214ENST00000513453 ANXA13P27216 316 aa16.76■□□□□ 0.27
SIL1-214ENST00000513453 ATICP31939 592 aa16.76■□□□□ 0.27
SIL1-214ENST00000513453 PXNP49023 591 aaPredicted RBP16.76■□□□□ 0.27
SIL1-214ENST00000513453 NOP14P78316 857 aaKnown RBP16.76■□□□□ 0.27
SIL1-214ENST00000513453 GRSF1Q12849 480 aaKnown RBP eCLIP16.76■□□□□ 0.27
SIL1-214ENST00000513453 PSMD2Q13200 908 aa16.76■□□□□ 0.27
SIL1-214ENST00000513453 BIRC3Q13489 604 aa16.76■□□□□ 0.27
SIL1-214ENST00000513453 KCNB1Q14721 858 aa16.76■□□□□ 0.27
SIL1-214ENST00000513453 RSPO4Q2I0M5 234 aaPredicted RBP16.76■□□□□ 0.27
SIL1-214ENST00000513453 C1orf220Q5T0J3 134 aa16.76■□□□□ 0.27
SIL1-214ENST00000513453 SCARA5Q6ZMJ2 495 aa16.76■□□□□ 0.27
SIL1-214ENST00000513453 PAQR9Q6ZVX9 377 aa16.76■□□□□ 0.27
SIL1-214ENST00000513453 LONP2Q86WA8 852 aa16.76■□□□□ 0.27
SIL1-214ENST00000513453 SLC9A9Q8IVB4 645 aa16.76■□□□□ 0.27
SIL1-214ENST00000513453 B3GALNT2Q8NCR0 500 aa16.76■□□□□ 0.27
SIL1-214ENST00000513453 GOLGA5Q8TBA6 731 aa16.76■□□□□ 0.27
SIL1-214ENST00000513453 SYAP1Q96A49 352 aaPredicted RBP16.76■□□□□ 0.27
SIL1-214ENST00000513453 SPATA32Q96LK8 384 aa16.76■□□□□ 0.27
SIL1-214ENST00000513453 CEP295NLQ96MC4 621 aa16.76■□□□□ 0.27
SIL1-214ENST00000513453 VRTNQ9H8Y1 702 aa16.76■□□□□ 0.27
SIL1-214ENST00000513453 ARHGAP26Q9UNA1 814 aa16.76■□□□□ 0.27
SIL1-214ENST00000513453 SDK1Q7Z5N4 2213 aa16.76■□□□□ 0.27
SIL1-214ENST00000513453 FAM237AA0A1B0GTK4 181 aa16.75■□□□□ 0.27
SIL1-214ENST00000513453 ANTXRLA6NF34 631 aa16.75■□□□□ 0.27
SIL1-214ENST00000513453 RNF40O75150 1001 aa16.75■□□□□ 0.27
SIL1-214ENST00000513453 NR3C1P04150 777 aa16.75■□□□□ 0.27
SIL1-214ENST00000513453 TCF3P15923 654 aa16.75■□□□□ 0.27
SIL1-214ENST00000513453 HOXA6P31267 233 aa16.75■□□□□ 0.27
SIL1-214ENST00000513453 IFNAR2P48551 515 aa16.75■□□□□ 0.27
SIL1-214ENST00000513453 NDUFA8P51970 172 aa16.75■□□□□ 0.27
SIL1-214ENST00000513453 FOXK2Q01167 660 aa16.75■□□□□ 0.27
SIL1-214ENST00000513453 IFRD2Q12894 506 aaPredicted RBP16.75■□□□□ 0.27
SIL1-214ENST00000513453 TAF10Q12962 218 aa16.75■□□□□ 0.27
SIL1-214ENST00000513453 NCOA4Q13772 614 aa16.75■□□□□ 0.27
SIL1-214ENST00000513453 SIM2Q14190 667 aaPredicted RBP16.75■□□□□ 0.27
SIL1-214ENST00000513453 GAB4Q2WGN9 574 aa16.75■□□□□ 0.27
SIL1-214ENST00000513453 ZNF699Q32M78 642 aa16.75■□□□□ 0.27
SIL1-214ENST00000513453 LAIR1Q6GTX8 287 aa16.75■□□□□ 0.27
SIL1-214ENST00000513453 CPA6Q8N4T0 437 aa16.75■□□□□ 0.27
SIL1-214ENST00000513453 TMEM174Q8WUU8 243 aa16.75■□□□□ 0.27
SIL1-214ENST00000513453 KCNK16Q96T55 309 aa16.75■□□□□ 0.27
SIL1-214ENST00000513453 P2RY13Q9BPV8 354 aa16.75■□□□□ 0.27
SIL1-214ENST00000513453 ELOVL4Q9GZR5 314 aa16.75■□□□□ 0.27
SIL1-214ENST00000513453 TRPM5Q9NZQ8 1165 aa16.75■□□□□ 0.27
SIL1-214ENST00000513453 GMEB2Q9UKD1 530 aa16.75■□□□□ 0.27
SIL1-214ENST00000513453 MED19A0JLT2 244 aaPredicted RBP16.74■□□□□ 0.27
SIL1-214ENST00000513453 LEFTY2O00292 366 aa16.74■□□□□ 0.27
SIL1-214ENST00000513453 PDXKO00764 312 aa16.74■□□□□ 0.27
SIL1-214ENST00000513453 SCAMP3O14828 347 aaKnown RBP16.74■□□□□ 0.27
SIL1-214ENST00000513453 OLFM2O95897 454 aa16.74■□□□□ 0.27
SIL1-214ENST00000513453 RPN1P04843 607 aaKnown RBP16.74■□□□□ 0.27
SIL1-214ENST00000513453 KRT85P78386 507 aa16.74■□□□□ 0.27
SIL1-214ENST00000513453 SPEM2Q0P670 501 aa16.74■□□□□ 0.27
SIL1-214ENST00000513453 ORC1Q13415 861 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms