RNA–Protein interactions for RNA: ENST00000512191.1

CAST-237, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-237ENST00000512191 SF3B1O75533 1304 aaKnown RBP eCLIP5.16□□□□□ -1.58
CAST-237ENST00000512191 RIF1Q5UIP0 2472 aaKnown RBP5.15□□□□□ -1.58
CAST-237ENST00000512191 TEX51A0A1B0GUA7 166 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 SSU72P8A0A1W2PR75 194 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 CHURC1-FNTBB4DL54 471 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 RBAK-RBAKDNI3L0D1 243 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 INO80B-WBP1J3KQ70 363 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 TEX28O15482 410 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 CCNT1O60563 726 aaKnown RBP5.15□□□□□ -1.59
CAST-237ENST00000512191 KINO60870 393 aaKnown RBP5.15□□□□□ -1.59
CAST-237ENST00000512191 LRRN2O75325 713 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 TADA2AO75478 443 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 DDHD2O94830 711 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 POMCP01189 267 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 LAMP2P13473 410 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 PDIA3P30101 505 aaKnown RBP5.15□□□□□ -1.59
CAST-237ENST00000512191 HOXA9P31269 272 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 HSPA4P34932 840 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 DLG4P78352 724 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 DSC1Q08554 894 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 RAD51AP2Q09MP3 1159 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 GRIK3Q13003 919 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 DRP2Q13474 957 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 EMC2Q15006 297 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 EPHA7Q15375 998 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 NTRK3Q16288 839 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 ZNF528Q3MIS6 628 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 LONRF3Q496Y0 759 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 XKR9Q5GH70 373 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 CWF19L1Q69YN2 538 aaKnown RBP5.15□□□□□ -1.59
CAST-237ENST00000512191 SLC27A1Q6PCB7 646 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 DCLRE1AQ6PJP8 1040 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 B3GNT9Q6UX72 402 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 RSPO2Q6UXX9 243 aaPredicted RBP5.15□□□□□ -1.59
CAST-237ENST00000512191 DGLUCYQ7Z3D6 616 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 NEK8Q86SG6 692 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 ZNF605Q86T29 641 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 FERMT3Q86UX7 667 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 ZNF280BQ86YH2 543 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 C1orf210Q8IVY1 113 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 COLGALT2Q8IYK4 626 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 SLC44A3Q8N4M1 653 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 GOLM1Q8NBJ4 401 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 ATRIPQ8WXE1 791 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 MBOAT7Q96N66 472 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 LXNQ9BS40 222 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 NFKBIZQ9BYH8 718 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 OSBPL6Q9BZF3 934 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.15□□□□□ -1.59
CAST-237ENST00000512191 CSRNP2Q9H175 543 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 TBC1D17Q9HA65 648 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 KCNMB3Q9NPA1 279 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 ARHGEF3Q9NR81 526 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 CHST7Q9NS84 486 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 CDH22Q9UJ99 828 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 ADAM28Q9UKQ2 775 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 MRPS17Q9Y2R5 130 aaKnown RBP5.15□□□□□ -1.59
CAST-237ENST00000512191 POLR3KQ9Y2Y1 108 aaPredicted RBP5.15□□□□□ -1.59
CAST-237ENST00000512191 PRG3Q9Y2Y8 225 aaPredicted RBP5.15□□□□□ -1.59
CAST-237ENST00000512191 IPPQ9Y573 584 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 CFAP54Q96N23 3096 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 FAM186AA6NE01 2351 aa5.15□□□□□ -1.59
CAST-237ENST00000512191 ANHXE9PGG2 379 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 HRKO00198 91 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 RGS13O14921 159 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 LAMTOR5O43504 91 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 TRAPPC3O43617 180 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 PI15O43692 258 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 FOXD2O60548 495 aaPredicted RBP5.14□□□□□ -1.59
CAST-237ENST00000512191 EIF5BO60841 1220 aaKnown RBP5.14□□□□□ -1.59
CAST-237ENST00000512191 TDP2O95551 362 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 POU2F2P09086 479 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 XRCC6P12956 609 aaKnown RBP eCLIP5.14□□□□□ -1.59
CAST-237ENST00000512191 ENDOUP21128 410 aaKnown RBP5.14□□□□□ -1.59
CAST-237ENST00000512191 HOXA11P31270 313 aaPredicted RBP5.14□□□□□ -1.59
CAST-237ENST00000512191 MLH1P40692 756 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 PCBP3P57721 371 aaKnown RBP5.14□□□□□ -1.59
CAST-237ENST00000512191 PTENP60484 403 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 CCT2P78371 535 aaKnown RBP5.14□□□□□ -1.59
CAST-237ENST00000512191 ZNF385BQ569K4 471 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 PPM1LQ5SGD2 360 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 FUT10Q6P4F1 479 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 DNAJC14Q6Y2X3 702 aaPredicted RBP5.14□□□□□ -1.59
CAST-237ENST00000512191 RUFY3Q7L099 469 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 TMEM151BQ8IW70 566 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 ZBTB8OSQ8IWT0 167 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 TPH2Q8IWU9 490 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 PJA1Q8NG27 643 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 RIN2Q8WYP3 895 aaPredicted RBP5.14□□□□□ -1.59
CAST-237ENST00000512191 TMEM143Q96AN5 459 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 CEP89Q96ST8 783 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 GAD1Q99259 594 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 KIF2CQ99661 725 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 ADPGKQ9BRR6 497 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 IER2Q9BTL4 223 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 TTPALQ9BTX7 342 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 VN1R3Q9BXE9 311 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 FAM126AQ9BYI3 521 aaPredicted RBP5.14□□□□□ -1.59
CAST-237ENST00000512191 NT5C3AQ9H0P0 336 aa5.14□□□□□ -1.59
CAST-237ENST00000512191 C2orf40Q9H1Z8 148 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms