RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 PADI6Q6TGC4 694 aa13.52□□□□□ -0.25
HMGB2-205ENST00000511316 RSPH3Q86UC2 560 aa13.52□□□□□ -0.25
HMGB2-205ENST00000511316 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.52□□□□□ -0.25
HMGB2-205ENST00000511316 VCPIP1Q96JH7 1222 aa13.52□□□□□ -0.25
HMGB2-205ENST00000511316 CEP170P1Q96L14 293 aa13.52□□□□□ -0.25
HMGB2-205ENST00000511316 MRPL47Q9HD33 250 aaKnown RBP13.52□□□□□ -0.25
HMGB2-205ENST00000511316 ABCF3Q9NUQ8 709 aa13.52□□□□□ -0.25
HMGB2-205ENST00000511316 HSPBP1Q9NZL4 362 aa13.52□□□□□ -0.25
HMGB2-205ENST00000511316 PADI3Q9ULW8 664 aa13.52□□□□□ -0.25
HMGB2-205ENST00000511316 YBX2Q9Y2T7 364 aaKnown RBP13.52□□□□□ -0.25
HMGB2-205ENST00000511316 TRPV2Q9Y5S1 764 aa13.52□□□□□ -0.25
HMGB2-205ENST00000511316 SLC4A7Q9Y6M7 1214 aa13.52□□□□□ -0.25
HMGB2-205ENST00000511316 UNC80Q8N2C7 3258 aa13.52□□□□□ -0.25
HMGB2-205ENST00000511316 MYH11P35749 1972 aa13.51□□□□□ -0.25
HMGB2-205ENST00000511316 SFI1A8K8P3 1242 aa13.51□□□□□ -0.25
HMGB2-205ENST00000511316 ENPP3O14638 875 aa13.51□□□□□ -0.25
HMGB2-205ENST00000511316 ARHGEF15O94989 841 aa13.51□□□□□ -0.25
HMGB2-205ENST00000511316 RPLP2P05387 115 aaKnown RBP13.51□□□□□ -0.25
HMGB2-205ENST00000511316 CYP11B1P15538 503 aa13.51□□□□□ -0.25
HMGB2-205ENST00000511316 CD52P31358 61 aa13.51□□□□□ -0.25
HMGB2-205ENST00000511316 SLCO1A2P46721 670 aa13.51□□□□□ -0.25
HMGB2-205ENST00000511316 RABGGTBP53611 331 aa13.51□□□□□ -0.25
HMGB2-205ENST00000511316 CRYBB1P53674 252 aaPredicted RBP13.51□□□□□ -0.25
HMGB2-205ENST00000511316 NLRP11P59045 1033 aaKnown RBP13.51□□□□□ -0.25
HMGB2-205ENST00000511316 FMO1Q01740 532 aa13.51□□□□□ -0.25
HMGB2-205ENST00000511316 MYO1EQ12965 1108 aa13.51□□□□□ -0.25
HMGB2-205ENST00000511316 SPARCL1Q14515 664 aa13.51□□□□□ -0.25
HMGB2-205ENST00000511316 VSTM1Q6UX27 236 aa13.51□□□□□ -0.25
HMGB2-205ENST00000511316 Q7L0L9 218 aa13.51□□□□□ -0.25
HMGB2-205ENST00000511316 KSR1Q8IVT5 923 aa13.51□□□□□ -0.25
HMGB2-205ENST00000511316 PHOSPHO2Q8TCD6 241 aa13.51□□□□□ -0.25
HMGB2-205ENST00000511316 ZNF668Q96K58 619 aaPredicted RBP13.51□□□□□ -0.25
HMGB2-205ENST00000511316 LRMDAQ9H2I8 198 aa13.51□□□□□ -0.25
HMGB2-205ENST00000511316 IFT122Q9HBG6 1241 aa13.51□□□□□ -0.25
HMGB2-205ENST00000511316 ANKEF1Q9NU02 776 aa13.51□□□□□ -0.25
HMGB2-205ENST00000511316 SCINQ9Y6U3 715 aa13.51□□□□□ -0.25
HMGB2-205ENST00000511316 SMAPO00193 183 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 MGEA5O60502 916 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 CHRNB2P17787 502 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 ADCY8P40145 1251 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 IKBKEQ14164 716 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 ZRSR2Q15696 482 aaKnown RBP13.5□□□□□ -0.25
HMGB2-205ENST00000511316 CLEC16AQ2KHT3 1053 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 DRICH1Q6PGQ1 229 aaPredicted RBP13.5□□□□□ -0.25
HMGB2-205ENST00000511316 TSHZ1Q6ZSZ6 1077 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 NOP9Q86U38 636 aaKnown RBP13.5□□□□□ -0.25
HMGB2-205ENST00000511316 DNAAF5Q86Y56 855 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 PALB2Q86YC2 1186 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 ARHGEF19Q8IW93 802 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 FBXL13Q8NEE6 735 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 TOP1MTQ969P6 601 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 TBC1D31Q96DN5 1066 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 PPP1R16BQ96T49 567 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 OSMRQ99650 979 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 PITPNM3Q9BZ71 974 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 DCLK3Q9C098 648 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 KIAA1586Q9HCI6 787 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 DKC1O60832 514 aaKnown RBP eCLIP13.5□□□□□ -0.25
HMGB2-205ENST00000511316 CSDE1O75534 798 aaKnown RBP13.5□□□□□ -0.25
HMGB2-205ENST00000511316 ACSL3O95573 720 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 POLGP54098 1239 aaPredicted RBP13.5□□□□□ -0.25
HMGB2-205ENST00000511316 NCKAP1LP55160 1127 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 PPP3CAQ08209 521 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 LONRF1Q17RB8 773 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 ZC3H12AQ5D1E8 599 aaKnown RBP13.5□□□□□ -0.25
HMGB2-205ENST00000511316 WASHC2DQ5SRD0 308 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 RHOT1Q8IXI2 618 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 PPM1KQ8N3J5 372 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 ZCCHC9Q8N567 271 aaKnown RBP13.5□□□□□ -0.25
HMGB2-205ENST00000511316 AGAP11Q8TF27 550 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 SEPT8Q92599 483 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 FRMD8P1Q9BZ68 369 aaPredicted RBP13.5□□□□□ -0.25
HMGB2-205ENST00000511316 TMEM117Q9H0C3 514 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 PPME1Q9Y570 386 aa13.5□□□□□ -0.25
HMGB2-205ENST00000511316 ZBBXA8MT70 800 aa13.49□□□□□ -0.25
HMGB2-205ENST00000511316 TRAFD1O14545 582 aaPredicted RBP13.49□□□□□ -0.25
HMGB2-205ENST00000511316 EIF4BP23588 611 aaKnown RBP13.49□□□□□ -0.25
HMGB2-205ENST00000511316 DNAJB2P25686 324 aa13.49□□□□□ -0.25
HMGB2-205ENST00000511316 ARL2P36404 184 aa13.49□□□□□ -0.25
HMGB2-205ENST00000511316 GCLMP48507 274 aa13.49□□□□□ -0.25
HMGB2-205ENST00000511316 MARCKSL1P49006 195 aa13.49□□□□□ -0.25
HMGB2-205ENST00000511316 PSEN1P49768 467 aa13.49□□□□□ -0.25
HMGB2-205ENST00000511316 ITGA8P53708 1063 aa13.49□□□□□ -0.25
HMGB2-205ENST00000511316 OTUD6AQ7L8S5 288 aa13.49□□□□□ -0.25
HMGB2-205ENST00000511316 HERC6Q8IVU3 1022 aa13.49□□□□□ -0.25
HMGB2-205ENST00000511316 KATNAL2Q8IYT4 538 aa13.49□□□□□ -0.25
HMGB2-205ENST00000511316 EXD1Q8NHP7 514 aa13.49□□□□□ -0.25
HMGB2-205ENST00000511316 APBB2Q92870 758 aa13.49□□□□□ -0.25
HMGB2-205ENST00000511316 TMEM143Q96AN5 459 aa13.49□□□□□ -0.25
HMGB2-205ENST00000511316 STAMBPL1Q96FJ0 436 aa13.49□□□□□ -0.25
HMGB2-205ENST00000511316 RBM41Q96IZ5 413 aaKnown RBP13.49□□□□□ -0.25
HMGB2-205ENST00000511316 PCDHB18PQ96TA0 734 aa13.49□□□□□ -0.25
HMGB2-205ENST00000511316 AAASQ9NRG9 546 aa13.49□□□□□ -0.25
HMGB2-205ENST00000511316 MTMR10Q9NXD2 777 aa13.49□□□□□ -0.25
HMGB2-205ENST00000511316 SLC24A2Q9UI40 661 aa13.49□□□□□ -0.25
HMGB2-205ENST00000511316 CORO1CQ9ULV4 474 aaPredicted RBP13.49□□□□□ -0.25
HMGB2-205ENST00000511316 ST3GAL5Q9UNP4 418 aa13.49□□□□□ -0.25
HMGB2-205ENST00000511316 PCDHB2Q9Y5E7 798 aa13.49□□□□□ -0.25
HMGB2-205ENST00000511316 PPP1R12AO14974 1030 aaPredicted RBP13.48□□□□□ -0.25
HMGB2-205ENST00000511316 CLDN3O15551 220 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms