RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 ZIM3Q96PE6 472 aa13.13□□□□□ -0.31
PRDM16-205ENST00000509860 NAP1L3Q99457 506 aaPredicted RBP13.13□□□□□ -0.31
PRDM16-205ENST00000509860 CHST12Q9NRB3 414 aa13.13□□□□□ -0.31
PRDM16-205ENST00000509860 STRIP2Q9ULQ0 834 aa13.13□□□□□ -0.31
PRDM16-205ENST00000509860 CD4P01730 458 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 WARSP23381 471 aaKnown RBP13.12□□□□□ -0.31
PRDM16-205ENST00000509860 PTPN7P35236 360 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 GJC1P36383 396 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 RABGGTBP53611 331 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 PAK2Q13177 524 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 PTK7Q13308 1070 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 CUL1Q13616 776 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 TCTN1Q2MV58 587 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 C15orf59Q2T9L4 293 aaPredicted RBP13.12□□□□□ -0.31
PRDM16-205ENST00000509860 LRRC38Q5VT99 294 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 ARMCX6Q7L4S7 300 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 UNC93AQ86WB7 457 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 PXYLP1Q8TE99 480 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 TRIM31Q9BZY9 425 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.12□□□□□ -0.31
PRDM16-205ENST00000509860 TAF6P49848 677 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 SCNN1GP51170 649 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 CACNA2D1P54289 1103 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 SNX1Q13596 522 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 ZSCAN26Q16670 478 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 CCDC14Q49A88 953 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 CCDC70Q6NSX1 233 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 ZNF598Q86UK7 904 aaKnown RBP13.12□□□□□ -0.31
PRDM16-205ENST00000509860 ZNF296Q8WUU4 475 aaPredicted RBP13.12□□□□□ -0.31
PRDM16-205ENST00000509860 TSPAN18Q96SJ8 248 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 PTPN22Q9Y2R2 807 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 RRP15Q9Y3B9 282 aaKnown RBP13.12□□□□□ -0.31
PRDM16-205ENST00000509860 hCG_1818297A0A087WSY0 165 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 A0A1W2PQ45 241 aaPredicted RBP13.12□□□□□ -0.31
PRDM16-205ENST00000509860 A0A1W2PQY0 241 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 CAND2O75155 1236 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 GRAP2O75791 330 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 TAP1Q03518 808 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 PIGHQ14442 188 aaPredicted RBP13.12□□□□□ -0.31
PRDM16-205ENST00000509860 UPP1Q16831 310 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 TTMPQ5BVD1 217 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 SPOCD1Q6ZMY3 1216 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 TMC3Q7Z5M5 1100 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 OR6B3Q8NGW1 331 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 OSBPL8Q9BZF1 889 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 AAASQ9NRG9 546 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 KIAA1257Q9ULG3 409 aa13.12□□□□□ -0.31
PRDM16-205ENST00000509860 COL4A6Q14031 1691 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 CLDN5O00501 218 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 PPP1R12AO14974 1030 aaPredicted RBP13.11□□□□□ -0.31
PRDM16-205ENST00000509860 CKBP12277 381 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 HSPA6P17066 643 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 ACAT1P24752 427 aaKnown RBP13.11□□□□□ -0.31
PRDM16-205ENST00000509860 PSMA2P25787 234 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 FNTAP49354 379 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 OTUD1Q5VV17 481 aaPredicted RBP13.11□□□□□ -0.31
PRDM16-205ENST00000509860 WSCD1Q658N2 575 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 SCUBE3Q8IX30 993 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 ADGRF2Q8IZF7 708 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 FUKQ8N0W3 1084 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 SPC25Q9HBM1 224 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 CRTAC1Q9NQ79 661 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 IRAK4Q9NWZ3 460 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 SNX24Q9Y343 169 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 FAM187AA6NFU0 413 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 A8MXQ7 604 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 DCUN1D2Q6PH85 259 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 MAATS1Q7Z4T9 603 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 SLC2A14Q8TDB8 520 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 CFAP57Q96MR6 1250 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 MAGEB5Q9BZ81 275 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 FAN1Q9Y2M0 1017 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 ITGB1P05556 798 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 MIPP30301 263 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 GNL1P36915 607 aaPredicted RBP13.11□□□□□ -0.31
PRDM16-205ENST00000509860 HSD17B3P37058 310 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 FAM102AQ5T9C2 384 aaPredicted RBP13.11□□□□□ -0.31
PRDM16-205ENST00000509860 REM2Q8IYK8 340 aaPredicted RBP13.11□□□□□ -0.31
PRDM16-205ENST00000509860 TOP6BLQ8N6T0 577 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 CCDC26Q8TAB7 109 aa13.11□□□□□ -0.31
PRDM16-205ENST00000509860 NDRG1Q92597 394 aaKnown RBP13.11□□□□□ -0.31
PRDM16-205ENST00000509860 TSPYL2Q9H2G4 693 aaPredicted RBP13.11□□□□□ -0.31
PRDM16-205ENST00000509860 DCAF8L1A6NGE4 600 aa13.1□□□□□ -0.31
PRDM16-205ENST00000509860 ZNF623O75123 536 aa13.1□□□□□ -0.31
PRDM16-205ENST00000509860 KLRC2P26717 231 aa13.1□□□□□ -0.31
PRDM16-205ENST00000509860 ZNF143P52747 638 aaPredicted RBP13.1□□□□□ -0.31
PRDM16-205ENST00000509860 DRG2P55039 364 aaKnown RBP13.1□□□□□ -0.31
PRDM16-205ENST00000509860 RHBDF2Q6PJF5 856 aa13.1□□□□□ -0.31
PRDM16-205ENST00000509860 POLNQ7Z5Q5 900 aa13.1□□□□□ -0.31
PRDM16-205ENST00000509860 FBXO25Q8TCJ0 367 aa13.1□□□□□ -0.31
PRDM16-205ENST00000509860 VPS18Q9P253 973 aa13.1□□□□□ -0.31
PRDM16-205ENST00000509860 GOLGA6L10A0A0M3HER8 536 aa13.1□□□□□ -0.31
PRDM16-205ENST00000509860 TRUB2O95900 331 aaKnown RBP13.1□□□□□ -0.31
PRDM16-205ENST00000509860 ADORA2BP29275 332 aa13.1□□□□□ -0.31
PRDM16-205ENST00000509860 CLUL1Q15846 466 aa13.1□□□□□ -0.31
PRDM16-205ENST00000509860 SV2CQ496J9 727 aa13.1□□□□□ -0.31
PRDM16-205ENST00000509860 OTUD6BQ8N6M0 293 aa13.1□□□□□ -0.31
PRDM16-205ENST00000509860 ART4Q93070 314 aa13.1□□□□□ -0.31
PRDM16-205ENST00000509860 ARL8AQ96BM9 186 aa13.1□□□□□ -0.31
PRDM16-205ENST00000509860 ZNF560Q96MR9 790 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms