RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 SPTLC3Q9NUV7 552 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 GOLGA8QA0A0J9YX86 632 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 GOLGA8OA6NCC3 632 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 GOLGA8NF8WBI6 632 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 TGFBR3LH3BV60 316 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 EYA2O00167 538 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 RAB27BO00194 218 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 CCNT2O60583 730 aaKnown RBP4.1□□□□□ -1.75
NEDD4-209ENST00000508871 POTEIP0CG38 1075 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 ITIH2P19823 946 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 ADCYAP1R1P41586 468 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 BCAP31P51572 246 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 TUBA1BP68363 451 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 PFKPQ01813 784 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 SLC14A2Q15849 920 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 HP1BP3Q5SSJ5 553 aaPredicted RBP4.1□□□□□ -1.75
NEDD4-209ENST00000508871 INTS11Q5TA45 600 aaKnown RBP4.1□□□□□ -1.75
NEDD4-209ENST00000508871 ZSCAN25Q6NSZ9 544 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 ARHGEF18Q6ZSZ5 1173 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 TUBA1AQ71U36 451 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 RNF180Q86T96 592 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 VPS52Q8N1B4 723 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 MARCH10Q8NA82 808 aaPredicted RBP4.1□□□□□ -1.75
NEDD4-209ENST00000508871 CHST14Q8NCH0 376 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 CCDC12Q8WUD4 166 aaPredicted RBP4.1□□□□□ -1.75
NEDD4-209ENST00000508871 PIGKQ92643 395 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 NELL1Q92832 810 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 SLC35A4Q96G79 324 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 ERO1AQ96HE7 468 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 ZNF396Q96N95 335 aaPredicted RBP4.1□□□□□ -1.75
NEDD4-209ENST00000508871 TXLNGYQ9BZA5 131 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 SLC6A16Q9GZN6 736 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 HPS4Q9NQG7 708 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 ARHGEF38Q9NXL2 777 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 GRHPRQ9UBQ7 328 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 USP21Q9UK80 565 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 ZNRF3Q9ULT6 936 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 STRAPQ9Y3F4 350 aaKnown RBP4.1□□□□□ -1.75
NEDD4-209ENST00000508871 CORINQ9Y5Q5 1042 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 TEX13CA0A0J9YWL9 993 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 RAB19A4D1S5 217 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 PCP4L1A6NKN8 68 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 LGALS16A8MUM7 142 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 SYN3O14994 580 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 SMAD9O15198 467 aaKnown RBP4.1□□□□□ -1.75
NEDD4-209ENST00000508871 ACTN4O43707 911 aaKnown RBP4.1□□□□□ -1.75
NEDD4-209ENST00000508871 DOK2O60496 412 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 RNF8O76064 485 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 ACTL6BO94805 426 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 UBXN7O94888 489 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 IL18RAPO95256 599 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 LPLP06858 475 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 ZFYP08048 801 aaPredicted RBP4.1□□□□□ -1.75
NEDD4-209ENST00000508871 SYN1P17600 705 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 NFKB1P19838 968 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 CDH3P22223 829 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 GGCXP38435 758 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 CENPAP49450 140 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 PFKFB4Q16877 469 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 CCDC142Q17RM4 750 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 TAF1BQ53T94 588 aaPredicted RBP4.1□□□□□ -1.75
NEDD4-209ENST00000508871 OLFML2BQ68BL8 750 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 OVOS1Q6IE37 1185 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 NPNTQ6UXI9 565 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 SYT13Q7L8C5 426 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 CABP7Q86V35 215 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 LRRTM4Q86VH4 590 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 NLRP10Q86W26 655 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 TRIM42Q8IWZ5 723 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 ATP6V1C2Q8NEY4 427 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 PPP2R3CQ969Q6 453 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 CCT7Q99832 543 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 GSDMCQ9BYG8 508 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 CAPN11Q9UMQ6 739 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 SLC4A4Q9Y6R1 1079 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 WDR19Q8NEZ3 1342 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 ANKRD31Q8N7Z5 1873 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 A0A096LPE4 126 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 A0A1W2PPZ6 126 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 HAX1O00165 279 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 NDUFS2O75306 463 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 CAMTA2O94983 1202 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 LRG1P02750 347 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 SERPING1P05155 500 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 KRT7P08729 469 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 TFE3P19532 575 aaPredicted RBP4.1□□□□□ -1.75
NEDD4-209ENST00000508871 MAP4P27816 1152 aaKnown RBP4.1□□□□□ -1.75
NEDD4-209ENST00000508871 ARL4CP56559 192 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 MYO1EQ12965 1108 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 PTK2BQ14289 1009 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 KARSQ15046 597 aaKnown RBP4.1□□□□□ -1.75
NEDD4-209ENST00000508871 TBCEQ15813 527 aaPredicted RBP4.1□□□□□ -1.75
NEDD4-209ENST00000508871 HABP4Q5JVS0 413 aaKnown RBP4.1□□□□□ -1.75
NEDD4-209ENST00000508871 AKNAD1Q5T1N1 836 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 DCAF15Q66K64 600 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 IQCEQ6IPM2 695 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 AACSQ86V21 672 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 C12orf40Q86WS4 652 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 OR6B3Q8NGW1 331 aa4.1□□□□□ -1.75
NEDD4-209ENST00000508871 CFAP61Q8NHU2 1237 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms