RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 SRGAP2O75044 1071 aa7.02□□□□□ -1.29
HERC4-213ENST00000506515 GABRB3P28472 473 aa7.02□□□□□ -1.29
HERC4-213ENST00000506515 BMPR1AP36894 532 aa7.02□□□□□ -1.29
HERC4-213ENST00000506515 HALP42357 657 aa7.02□□□□□ -1.29
HERC4-213ENST00000506515 COPAP53621 1224 aa7.02□□□□□ -1.29
HERC4-213ENST00000506515 TP53BP2Q13625 1128 aa7.02□□□□□ -1.29
HERC4-213ENST00000506515 ZNF750Q32MQ0 723 aa7.02□□□□□ -1.29
HERC4-213ENST00000506515 TIGD2Q4W5G0 525 aa7.02□□□□□ -1.29
HERC4-213ENST00000506515 CCDC38Q502W7 563 aa7.02□□□□□ -1.29
HERC4-213ENST00000506515 SP5Q6BEB4 398 aaPredicted RBP7.02□□□□□ -1.29
HERC4-213ENST00000506515 SFRP4Q6FHJ7 346 aaPredicted RBP7.02□□□□□ -1.29
HERC4-213ENST00000506515 ARMC6Q6NXE6 501 aa7.02□□□□□ -1.29
HERC4-213ENST00000506515 RNF207Q6ZRF8 634 aa7.02□□□□□ -1.29
HERC4-213ENST00000506515 USP49Q70CQ1 688 aa7.02□□□□□ -1.29
HERC4-213ENST00000506515 KRT28Q7Z3Y7 464 aa7.02□□□□□ -1.29
HERC4-213ENST00000506515 SLC15A3Q8IY34 581 aa7.02□□□□□ -1.29
HERC4-213ENST00000506515 SPARTQ8N0X7 666 aa7.02□□□□□ -1.29
HERC4-213ENST00000506515 SNX27Q96L92 541 aa7.02□□□□□ -1.29
HERC4-213ENST00000506515 GDF15Q99988 308 aa7.02□□□□□ -1.29
HERC4-213ENST00000506515 TPSD1Q9BZJ3 242 aa7.02□□□□□ -1.29
HERC4-213ENST00000506515 GBA2Q9HCG7 927 aaPredicted RBP7.02□□□□□ -1.29
HERC4-213ENST00000506515 RGL1Q9NZL6 768 aa7.02□□□□□ -1.29
HERC4-213ENST00000506515 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.02□□□□□ -1.29
HERC4-213ENST00000506515 PRG4Q92954 1404 aaPredicted RBP7.01□□□□□ -1.29
HERC4-213ENST00000506515 AQP7P3A6NL99 342 aa7.01□□□□□ -1.29
HERC4-213ENST00000506515 SPDEFO95238 335 aa7.01□□□□□ -1.29
HERC4-213ENST00000506515 IDEP14735 1019 aa7.01□□□□□ -1.29
HERC4-213ENST00000506515 PPIFP30405 207 aaKnown RBP7.01□□□□□ -1.29
HERC4-213ENST00000506515 ATICP31939 592 aa7.01□□□□□ -1.29
HERC4-213ENST00000506515 GUCY1B3Q02153 619 aa7.01□□□□□ -1.29
HERC4-213ENST00000506515 PDCD2Q16342 344 aaPredicted RBP7.01□□□□□ -1.29
HERC4-213ENST00000506515 INO80DQ53TQ3 878 aaPredicted RBP7.01□□□□□ -1.29
HERC4-213ENST00000506515 ICE2Q659A1 982 aa7.01□□□□□ -1.29
HERC4-213ENST00000506515 ANKRD42Q8N9B4 389 aa7.01□□□□□ -1.29
HERC4-213ENST00000506515 SLC30A5Q8TAD4 765 aa7.01□□□□□ -1.29
HERC4-213ENST00000506515 DNAJB14Q8TBM8 379 aa7.01□□□□□ -1.29
HERC4-213ENST00000506515 IPO4Q8TEX9 1081 aaKnown RBP7.01□□□□□ -1.29
HERC4-213ENST00000506515 TMEM171Q8WVE6 324 aa7.01□□□□□ -1.29
HERC4-213ENST00000506515 FAM136AQ96C01 138 aa7.01□□□□□ -1.29
HERC4-213ENST00000506515 MYEOVQ96EZ4 313 aa7.01□□□□□ -1.29
HERC4-213ENST00000506515 OSBPL9Q96SU4 736 aa7.01□□□□□ -1.29
HERC4-213ENST00000506515 NELL2Q99435 816 aa7.01□□□□□ -1.29
HERC4-213ENST00000506515 TM7SF3Q9NS93 570 aa7.01□□□□□ -1.29
HERC4-213ENST00000506515 CAPN11Q9UMQ6 739 aa7.01□□□□□ -1.29
HERC4-213ENST00000506515 MORC2Q9Y6X9 1032 aaPredicted RBP7.01□□□□□ -1.29
HERC4-213ENST00000506515 MAPKBP1O60336 1514 aa7.01□□□□□ -1.29
HERC4-213ENST00000506515 CEP170Q5SW79 1584 aa7□□□□□ -1.29
HERC4-213ENST00000506515 KIF13AQ9H1H9 1805 aa7□□□□□ -1.29
HERC4-213ENST00000506515 TMEM200CA6NKL6 621 aa7□□□□□ -1.29
HERC4-213ENST00000506515 SKAP2O75563 359 aaPredicted RBP7□□□□□ -1.29
HERC4-213ENST00000506515 PPP3CBP16298 524 aa7□□□□□ -1.29
HERC4-213ENST00000506515 ADORA2AP29274 412 aa7□□□□□ -1.29
HERC4-213ENST00000506515 PDIA3P30101 505 aaKnown RBP7□□□□□ -1.29
HERC4-213ENST00000506515 DGCR2P98153 550 aa7□□□□□ -1.29
HERC4-213ENST00000506515 BLMHQ13867 455 aa7□□□□□ -1.29
HERC4-213ENST00000506515 RAB30Q15771 203 aa7□□□□□ -1.29
HERC4-213ENST00000506515 SYNE4Q8N205 404 aa7□□□□□ -1.29
HERC4-213ENST00000506515 CYP2W1Q8TAV3 490 aa7□□□□□ -1.29
HERC4-213ENST00000506515 PTCD3Q96EY7 689 aaKnown RBP7□□□□□ -1.29
HERC4-213ENST00000506515 HERPUD2Q9BSE4 406 aa7□□□□□ -1.29
HERC4-213ENST00000506515 C1QTNF3Q9BXJ4 246 aa7□□□□□ -1.29
HERC4-213ENST00000506515 ACTRT3Q9BYD9 372 aa7□□□□□ -1.29
HERC4-213ENST00000506515 AMBRA1Q9C0C7 1298 aa7□□□□□ -1.29
HERC4-213ENST00000506515 PCDHAC1Q9H158 963 aa7□□□□□ -1.29
HERC4-213ENST00000506515 FAM83DQ9H4H8 585 aa7□□□□□ -1.29
HERC4-213ENST00000506515 NRDE2Q9H7Z3 1164 aa7□□□□□ -1.29
HERC4-213ENST00000506515 OBP2BQ9NPH6 170 aa7□□□□□ -1.29
HERC4-213ENST00000506515 ANKFY1Q9P2R3 1169 aa7□□□□□ -1.29
HERC4-213ENST00000506515 DKK2Q9UBU2 259 aa7□□□□□ -1.29
HERC4-213ENST00000506515 ZMYND8Q9ULU4 1186 aaPredicted RBP7□□□□□ -1.29
HERC4-213ENST00000506515 HPSEQ9Y251 543 aa7□□□□□ -1.29
HERC4-213ENST00000506515 SSX2IPQ9Y2D8 614 aa7□□□□□ -1.29
HERC4-213ENST00000506515 KDM6BO15054 1643 aa7□□□□□ -1.29
HERC4-213ENST00000506515 PBRM1Q86U86 1689 aa7□□□□□ -1.29
HERC4-213ENST00000506515 hCG_1642624A0A1W2PR95 340 aa6.99□□□□□ -1.29
HERC4-213ENST00000506515 GOLGA6L3A6NEY3 463 aa6.99□□□□□ -1.29
HERC4-213ENST00000506515 PPM1DO15297 605 aa6.99□□□□□ -1.29
HERC4-213ENST00000506515 PIP5K1CO60331 668 aa6.99□□□□□ -1.29
HERC4-213ENST00000506515 CSF1RP07333 972 aa6.99□□□□□ -1.29
HERC4-213ENST00000506515 PDHA1P08559 390 aa6.99□□□□□ -1.29
HERC4-213ENST00000506515 HNRNPMP52272 730 aaKnown RBP eCLIP6.99□□□□□ -1.29
HERC4-213ENST00000506515 SP2Q02086 613 aa6.99□□□□□ -1.29
HERC4-213ENST00000506515 EFEMP1Q12805 493 aa6.99□□□□□ -1.29
HERC4-213ENST00000506515 PFKFB4Q16877 469 aa6.99□□□□□ -1.29
HERC4-213ENST00000506515 ARHGAP15Q53QZ3 475 aa6.99□□□□□ -1.29
HERC4-213ENST00000506515 DEPDC1Q5TB30 811 aa6.99□□□□□ -1.29
HERC4-213ENST00000506515 RAP1GAP2Q684P5 730 aa6.99□□□□□ -1.29
HERC4-213ENST00000506515 KIAA0408Q6ZU52 694 aa6.99□□□□□ -1.29
HERC4-213ENST00000506515 GPR149Q86SP6 731 aa6.99□□□□□ -1.29
HERC4-213ENST00000506515 MYCT1Q8N699 235 aa6.99□□□□□ -1.29
HERC4-213ENST00000506515 ATG16L2Q8NAA4 619 aa6.99□□□□□ -1.29
HERC4-213ENST00000506515 B3GALNT2Q8NCR0 500 aa6.99□□□□□ -1.29
HERC4-213ENST00000506515 CCT6BQ92526 530 aa6.99□□□□□ -1.29
HERC4-213ENST00000506515 SLC2A4RGQ9NR83 387 aa6.99□□□□□ -1.29
HERC4-213ENST00000506515 LRFN1Q9P244 771 aa6.99□□□□□ -1.29
HERC4-213ENST00000506515 TESQ9UGI8 421 aaKnown RBP6.99□□□□□ -1.29
HERC4-213ENST00000506515 FZD1Q9UP38 647 aa6.99□□□□□ -1.29
HERC4-213ENST00000506515 CUX1P39880 1505 aa6.98□□□□□ -1.29
HERC4-213ENST00000506515 CENPVL1A0A0U1RR11 272 aa6.98□□□□□ -1.29
HERC4-213ENST00000506515 AQP12BA6NM10 295 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms