RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 DNAJB4Q9UDY4 337 aa12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 MTUS1Q9ULD2 1270 aa12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 FNDC1Q4ZHG4 1894 aaPredicted RBP12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 TRIM43BA6NCK2 446 aa12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 DGKIO75912 1065 aa12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 GLI1P08151 1106 aa12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 PDGFRAP16234 1089 aa12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 RFC1P35251 1148 aaPredicted RBP12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 SLC11A1P49279 550 aa12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 ZNF143P52747 638 aaPredicted RBP12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 LONRF2Q1L5Z9 754 aa12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 GLE1Q53GS7 698 aaKnown RBP12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 SPOUT1Q5T280 376 aaKnown RBP12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 ZFYVE27Q5T4F4 411 aa12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 CC2D1AQ6P1N0 951 aaPredicted RBP12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 FAM183BPQ6ZVS7 135 aa12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 SLC26A9Q7LBE3 791 aa12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 POLNQ7Z5Q5 900 aa12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 MMGT1Q8N4V1 131 aa12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 SPATA4Q8NEY3 305 aa12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 RUBCNQ92622 972 aa12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 TOP1MTQ969P6 601 aa12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 TRIM43Q96BQ3 446 aaPredicted RBP12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 PCED1BQ96HM7 432 aa12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 PNPLA8Q9NP80 782 aa12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 DMAP1Q9NPF5 467 aaPredicted RBP12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 ARGLU1Q9NWB6 273 aaPredicted RBP12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 STK39Q9UEW8 545 aa12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 USTQ9Y2C2 406 aa12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 TSC2P49815 1807 aa12.64□□□□□ -0.39
POLR2J3-211ENST00000506060 MYBPHLA2RUH7 354 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 CLDN5O00501 218 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 DPYSL4O14531 572 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 HCRTO43612 131 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 HSF2BPO75031 334 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 ZRANB2O95218 330 aaKnown RBP eCLIP12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 ITGB1P05556 798 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 GALTP07902 379 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 LCP1P13796 627 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 CSF2RAP15509 400 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 LAG3P18627 525 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 FGFR3P22607 806 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 TKTP29401 623 aaKnown RBP12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 SDC4P31431 198 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 PCK1P35558 622 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 PEX5P50542 639 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 BCAR1P56945 870 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 MAP3K7CLP57077 242 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 RNASE9P60153 205 aaKnown RBP12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 COPS2P61201 443 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 TCTN1Q2MV58 587 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 CTXN3Q4LDR2 81 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 FAM171A1Q5VUB5 890 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 LLGL2Q6P1M3 1020 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 FUT10Q6P4F1 479 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 OLFML1Q6UWY5 402 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 CLEC20AQ6ZU45 233 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 ANKS3Q6ZW76 656 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 PIGZQ86VD9 579 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 CMTR2Q8IYT2 770 aaKnown RBP12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 KATNAL2Q8IYT4 538 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 RCOR2Q8IZ40 523 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 EXD1Q8NHP7 514 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 MYLPFQ96A32 169 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 FUBP3Q96I24 572 aaKnown RBP eCLIP12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 ZNF558Q96NG5 402 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 RUNDC3BQ96NL0 473 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 TRIM7Q9C029 511 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 CNGB3Q9NQW8 809 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 AAASQ9NRG9 546 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 TMEM51Q9NW97 253 aa12.63□□□□□ -0.39
POLR2J3-211ENST00000506060 LTBP2Q14767 1821 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 C2CD4BA6NLJ0 364 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 TULP2O00295 520 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 PDE2AO00408 941 aaPredicted RBP12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 KRIT1O00522 736 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 PAPSS1O43252 624 aaPredicted RBP12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 B4GALT3O60512 393 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 GJB6O95452 261 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 FGBP02675 491 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 FGGP02679 453 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 IGFBP6P24592 240 aaPredicted RBP12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 PTPN9P43378 593 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 GATMP50440 423 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 WDR5P61964 334 aaKnown RBP12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 FPGSQ05932 587 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 SMC1AQ14683 1233 aaKnown RBP12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 ERCC6LQ2NKX8 1250 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 VARS2Q5ST30 1063 aaKnown RBP12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 KIAA0319Q5VV43 1072 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 VSTM1Q6UX27 236 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 PAQR9Q6ZVX9 377 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 CEP57Q86XR8 500 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 CCDC50Q8IVM0 306 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 SCUBE3Q8IX30 993 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 C2orf15Q8WU43 125 aaKnown RBP12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 RXFP2Q8WXD0 754 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 IRGQQ8WZA9 623 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 ALG3Q92685 438 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms