RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 ATP8B3O60423 1300 aa23.49■■□□□ 1.35
LSM6-203ENST00000503982 PDXKO00764 312 aa23.48■■□□□ 1.35
LSM6-203ENST00000503982 STAU1O95793 577 aaKnown RBP23.48■■□□□ 1.35
LSM6-203ENST00000503982 P4HA1P13674 534 aa23.48■■□□□ 1.35
LSM6-203ENST00000503982 CDH8P55286 799 aa23.48■■□□□ 1.35
LSM6-203ENST00000503982 GAS6Q14393 721 aa23.48■■□□□ 1.35
LSM6-203ENST00000503982 HEATR6Q6AI08 1181 aaKnown RBP23.48■■□□□ 1.35
LSM6-203ENST00000503982 B3GALNT2Q8NCR0 500 aa23.48■■□□□ 1.35
LSM6-203ENST00000503982 ELMO3Q96BJ8 720 aa23.48■■□□□ 1.35
LSM6-203ENST00000503982 SLC22A12Q96S37 553 aa23.48■■□□□ 1.35
LSM6-203ENST00000503982 GZF1Q9H116 711 aaPredicted RBP23.48■■□□□ 1.35
LSM6-203ENST00000503982 KCTD10Q9H3F6 313 aa23.48■■□□□ 1.35
LSM6-203ENST00000503982 EP300Q09472 2414 aaPredicted RBP23.47■■□□□ 1.35
LSM6-203ENST00000503982 CLDN5O00501 218 aa23.47■■□□□ 1.35
LSM6-203ENST00000503982 LPAL2Q16609 132 aa23.47■■□□□ 1.35
LSM6-203ENST00000503982 SLC9A9Q8IVB4 645 aa23.47■■□□□ 1.35
LSM6-203ENST00000503982 SH3RF2Q8TEC5 729 aa23.47■■□□□ 1.35
LSM6-203ENST00000503982 CCDC34Q96HJ3 373 aa23.47■■□□□ 1.35
LSM6-203ENST00000503982 CEP295NLQ96MC4 621 aa23.47■■□□□ 1.35
LSM6-203ENST00000503982 IPO9Q96P70 1041 aaKnown RBP23.47■■□□□ 1.35
LSM6-203ENST00000503982 ZNF518BQ9C0D4 1074 aa23.47■■□□□ 1.35
LSM6-203ENST00000503982 GDPD2Q9HCC8 539 aa23.47■■□□□ 1.35
LSM6-203ENST00000503982 DMAC2Q9NW81 257 aa23.47■■□□□ 1.35
LSM6-203ENST00000503982 CHMP5Q9NZZ3 219 aa23.47■■□□□ 1.35
LSM6-203ENST00000503982 GMEB2Q9UKD1 530 aa23.47■■□□□ 1.35
LSM6-203ENST00000503982 MAPK8IP1Q9UQF2 711 aa23.47■■□□□ 1.35
LSM6-203ENST00000503982 NME7Q9Y5B8 376 aa23.47■■□□□ 1.35
LSM6-203ENST00000503982 WNT6Q9Y6F9 365 aa23.47■■□□□ 1.35
LSM6-203ENST00000503982 CHURC1-FNTBB4DL54 471 aa23.46■■□□□ 1.35
LSM6-203ENST00000503982 LILRB5O75023 590 aa23.46■■□□□ 1.35
LSM6-203ENST00000503982 PIK3CAP42336 1068 aa23.46■■□□□ 1.35
LSM6-203ENST00000503982 FNTBP49356 437 aa23.46■■□□□ 1.35
LSM6-203ENST00000503982 USP46P62068 366 aa23.46■■□□□ 1.35
LSM6-203ENST00000503982 DLG4P78352 724 aa23.46■■□□□ 1.35
LSM6-203ENST00000503982 ZNF77Q15935 545 aa23.46■■□□□ 1.35
LSM6-203ENST00000503982 WDR87Q6ZQQ6 2873 aa23.46■■□□□ 1.35
LSM6-203ENST00000503982 SYNPOQ8N3V7 929 aa23.46■■□□□ 1.35
LSM6-203ENST00000503982 RIN3Q8TB24 985 aa23.46■■□□□ 1.35
LSM6-203ENST00000503982 OSCP1Q8WVF1 389 aa23.46■■□□□ 1.35
LSM6-203ENST00000503982 ATP2A3Q93084 1043 aa23.46■■□□□ 1.35
LSM6-203ENST00000503982 TNIP3Q96KP6 325 aa23.46■■□□□ 1.35
LSM6-203ENST00000503982 C8orf48Q96LL4 319 aa23.46■■□□□ 1.35
LSM6-203ENST00000503982 SLITRK1Q96PX8 696 aa23.46■■□□□ 1.35
LSM6-203ENST00000503982 B3GNT5Q9BYG0 378 aa23.46■■□□□ 1.35
LSM6-203ENST00000503982 XYLT2Q9H1B5 865 aa23.46■■□□□ 1.35
LSM6-203ENST00000503982 SPTBN4Q9H254 2564 aa23.46■■□□□ 1.35
LSM6-203ENST00000503982 EPC1Q9H2F5 836 aa23.46■■□□□ 1.35
LSM6-203ENST00000503982 MMRN2Q9H8L6 949 aa23.46■■□□□ 1.35
LSM6-203ENST00000503982 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.46■■□□□ 1.35
LSM6-203ENST00000503982 C4BPAP04003 597 aaKnown RBP23.45■■□□□ 1.34
LSM6-203ENST00000503982 USP4Q13107 963 aa23.45■■□□□ 1.34
LSM6-203ENST00000503982 NR1H3Q13133 447 aa23.45■■□□□ 1.34
LSM6-203ENST00000503982 CCINQ13939 588 aa23.45■■□□□ 1.34
LSM6-203ENST00000503982 WDR44Q5JSH3 913 aa23.45■■□□□ 1.34
LSM6-203ENST00000503982 MAMSTRQ6ZN01 415 aa23.45■■□□□ 1.34
LSM6-203ENST00000503982 KRBA2Q6ZNG9 492 aa23.45■■□□□ 1.34
LSM6-203ENST00000503982 NELL1Q92832 810 aa23.45■■□□□ 1.34
LSM6-203ENST00000503982 ECT2Q9H8V3 914 aa23.45■■□□□ 1.34
LSM6-203ENST00000503982 GVINP1Q7Z2Y8 2422 aa23.45■■□□□ 1.34
LSM6-203ENST00000503982 RHOBTB3O94955 611 aa23.44■■□□□ 1.34
LSM6-203ENST00000503982 VNN1O95497 513 aa23.44■■□□□ 1.34
LSM6-203ENST00000503982 TDGF1P13385 188 aa23.44■■□□□ 1.34
LSM6-203ENST00000503982 KRT13P13646 458 aa23.44■■□□□ 1.34
LSM6-203ENST00000503982 TRIM21P19474 475 aaKnown RBP23.44■■□□□ 1.34
LSM6-203ENST00000503982 NR2F2P24468 414 aa23.44■■□□□ 1.34
LSM6-203ENST00000503982 PPP3CCP48454 512 aa23.44■■□□□ 1.34
LSM6-203ENST00000503982 SGSM1Q2NKQ1 1148 aa23.44■■□□□ 1.34
LSM6-203ENST00000503982 TMC2Q8TDI7 906 aa23.44■■□□□ 1.34
LSM6-203ENST00000503982 GCNT4Q9P109 453 aa23.44■■□□□ 1.34
LSM6-203ENST00000503982 USP18Q9UMW8 372 aa23.44■■□□□ 1.34
LSM6-203ENST00000503982 A0A1W2PQ27 194 aa23.43■■□□□ 1.34
LSM6-203ENST00000503982 A0A1W2PQ64 194 aa23.43■■□□□ 1.34
LSM6-203ENST00000503982 A0A1W2PQD8 194 aa23.43■■□□□ 1.34
LSM6-203ENST00000503982 GOLGA6L4A6NEF3 574 aa23.43■■□□□ 1.34
LSM6-203ENST00000503982 OTOL1A6NHN0 477 aaPredicted RBP23.43■■□□□ 1.34
LSM6-203ENST00000503982 ZNF202O95125 648 aa23.43■■□□□ 1.34
LSM6-203ENST00000503982 YWHAQP27348 245 aa23.43■■□□□ 1.34
LSM6-203ENST00000503982 VAMP7P51809 220 aa23.43■■□□□ 1.34
LSM6-203ENST00000503982 CACNA2D1P54289 1103 aa23.43■■□□□ 1.34
LSM6-203ENST00000503982 NOP14P78316 857 aaKnown RBP23.43■■□□□ 1.34
LSM6-203ENST00000503982 DMWDQ09019 674 aa23.43■■□□□ 1.34
LSM6-203ENST00000503982 DPYDQ12882 1025 aa23.43■■□□□ 1.34
LSM6-203ENST00000503982 TAF10Q12962 218 aa23.43■■□□□ 1.34
LSM6-203ENST00000503982 SIM2Q14190 667 aaPredicted RBP23.43■■□□□ 1.34
LSM6-203ENST00000503982 FSTL4Q6MZW2 842 aa23.43■■□□□ 1.34
LSM6-203ENST00000503982 CEP68Q76N32 757 aa23.43■■□□□ 1.34
LSM6-203ENST00000503982 ACOT1Q86TX2 421 aa23.43■■□□□ 1.34
LSM6-203ENST00000503982 FAM35AQ86V20 835 aa23.43■■□□□ 1.34
LSM6-203ENST00000503982 NUP93Q8N1F7 819 aa23.43■■□□□ 1.34
LSM6-203ENST00000503982 FBXO32Q969P5 355 aa23.43■■□□□ 1.34
LSM6-203ENST00000503982 CHFRQ96EP1 664 aa23.43■■□□□ 1.34
LSM6-203ENST00000503982 P2RY13Q9BPV8 354 aa23.43■■□□□ 1.34
LSM6-203ENST00000503982 IMPG2Q9BZV3 1241 aa23.43■■□□□ 1.34
LSM6-203ENST00000503982 GOLPH3LQ9H4A5 285 aa23.43■■□□□ 1.34
LSM6-203ENST00000503982 VRTNQ9H8Y1 702 aa23.43■■□□□ 1.34
LSM6-203ENST00000503982 SMPD4Q9NXE4 827 aa23.43■■□□□ 1.34
LSM6-203ENST00000503982 ARHGAP26Q9UNA1 814 aa23.43■■□□□ 1.34
LSM6-203ENST00000503982 SLC8A2Q9UPR5 921 aa23.43■■□□□ 1.34
LSM6-203ENST00000503982 RALGAPA1Q6GYQ0 2036 aa23.43■■□□□ 1.34
LSM6-203ENST00000503982 LEFTY2O00292 366 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms