RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 PAPLNO95428 1278 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 P4HBP07237 508 aaKnown RBP5.53□□□□□ -1.52
HTT-202ENST00000502820 ERCC5P28715 1186 aaPredicted RBP5.53□□□□□ -1.52
HTT-202ENST00000502820 TNFRSF8P28908 595 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 QARSP47897 775 aaKnown RBP5.53□□□□□ -1.52
HTT-202ENST00000502820 ME1P48163 572 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 CLCNKBP51801 687 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 SMTNP53814 917 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 CYP4F8P98187 520 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 SPAG1Q07617 926 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 EPHA7Q15375 998 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 PDCD2Q16342 344 aaPredicted RBP5.53□□□□□ -1.52
HTT-202ENST00000502820 CTXN3Q4LDR2 81 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 ALS2CLQ60I27 953 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 PIP4P1Q86T03 277 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 C11orf74Q86VG3 221 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 TMTC1Q8IUR5 882 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 SYT12Q8IV01 421 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 TMEM139Q8IV31 216 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 NAXDQ8IW45 347 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 SLFN12Q8IYM2 578 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 ARFGAP2Q8N6H7 521 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 EIF1ADQ8N9N8 165 aaKnown RBP5.53□□□□□ -1.52
HTT-202ENST00000502820 GSTCDQ8NEC7 633 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 ZNF461Q8TAF7 563 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 SHKBP1Q8TBC3 707 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 ADAMTS14Q8WXS8 1223 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 MIEF2Q96C03 454 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 DDX27Q96GQ7 796 aaKnown RBP5.53□□□□□ -1.52
HTT-202ENST00000502820 NAF1Q96HR8 494 aaKnown RBP5.53□□□□□ -1.52
HTT-202ENST00000502820 CCDC43Q96MW1 224 aaKnown RBP5.53□□□□□ -1.52
HTT-202ENST00000502820 LRRC3BQ96PB8 259 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 MTMR9Q96QG7 549 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 SH3GL3Q99963 347 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 P2RY13Q9BPV8 354 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 LXNQ9BS40 222 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 GPR88Q9GZN0 384 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 CXCL16Q9H2A7 254 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 DHX33Q9H6R0 707 aaKnown RBP5.53□□□□□ -1.52
HTT-202ENST00000502820 ANKZF1Q9H8Y5 726 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 ZNHIT6Q9NWK9 470 aaKnown RBP5.53□□□□□ -1.52
HTT-202ENST00000502820 DNMT3LQ9UJW3 386 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 SLC6A14Q9UN76 642 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 PPME1Q9Y570 386 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 NUB1Q9Y5A7 615 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 FAM169AQ9Y6X4 670 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 ZMYM2Q9UBW7 1377 aa5.53□□□□□ -1.52
HTT-202ENST00000502820 LOXHD1Q8IVV2 1947 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 GOLGA6L10A0A0M3HER8 536 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 FAM221BA6H8Z2 402 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 GOLGA6CA6NDK9 693 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 AKR1B15C9JRZ8 316 aaPredicted RBP5.52□□□□□ -1.53
HTT-202ENST00000502820 PLK4O00444 970 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 DKC1O60832 514 aaKnown RBP eCLIP5.52□□□□□ -1.53
HTT-202ENST00000502820 MOSPD3O75425 235 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 SOAT2O75908 522 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 ALDH1A2O94788 518 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 WISP1O95388 367 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 GOLGA6DP0CG33 693 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 ARSAP15289 507 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 ATF2P15336 505 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 ARF4P18085 180 aaPredicted RBP5.52□□□□□ -1.53
HTT-202ENST00000502820 DRD1P21728 446 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 FGFR3P22607 806 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 GABRR2P28476 465 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 MARCKSP29966 332 aaPredicted RBP5.52□□□□□ -1.53
HTT-202ENST00000502820 AXLP30530 894 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 HNRNPH1P31943 449 aaKnown RBP5.52□□□□□ -1.53
HTT-202ENST00000502820 YWHABP31946 246 aaKnown RBP5.52□□□□□ -1.53
HTT-202ENST00000502820 ALDH1A3P47895 512 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 EPHB3P54753 998 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 GYS2P54840 703 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 SH3BGRP55822 239 aaPredicted RBP5.52□□□□□ -1.53
HTT-202ENST00000502820 AMPD2Q01433 879 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 RPL6Q02878 288 aaKnown RBP5.52□□□□□ -1.53
HTT-202ENST00000502820 CYP4A11Q02928 519 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 FCHO2Q0JRZ9 810 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 BFSP1Q12934 665 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 STIM1Q13586 685 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 RUNX3Q13761 415 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 TFDP1Q14186 410 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 LY6DQ14210 128 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 MCM6Q14566 821 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 NCAPHQ15003 741 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 SF3A1Q15459 793 aaKnown RBP5.52□□□□□ -1.53
HTT-202ENST00000502820 PLEKHG6Q3KR16 790 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 FILIP1LQ4L180 1135 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 XKR9Q5GH70 373 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 TMEM196Q5HYL7 178 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 NCAPH2Q6IBW4 605 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 SLC27A1Q6PCB7 646 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 EMBQ6PCB8 327 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 RNF19BQ6ZMZ0 732 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 TOGARAM2Q6ZUX3 1019 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 SYT13Q7L8C5 426 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 SLCO6A1Q86UG4 719 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 NOSTRINQ8IVI9 506 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 HOMEZQ8IX15 550 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 GPR65Q8IYL9 337 aa5.52□□□□□ -1.53
HTT-202ENST00000502820 OTUD6BQ8N6M0 293 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms