RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 TMEM98Q9Y2Y6 226 aa6.1□□□□□ -1.43
HMGB1P3-201ENST00000502802 AATKQ6ZMQ8 1374 aa6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 TISP43B9A030 160 aa6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 TOR1BO14657 336 aa6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 LAMTOR5O43504 91 aa6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 NUAK1O60285 661 aa6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 RAD17O75943 681 aa6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 SUN1O94901 812 aa6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 MBD4O95243 580 aa6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 ARP10275 920 aa6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 KCNA2P16389 499 aa6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 ITGALP20701 1170 aa6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 AARSP49588 968 aaKnown RBP eCLIP6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 PRKAA2P54646 552 aa6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 MPP1Q00013 466 aa6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 TLE2Q04725 743 aa6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 GPS1Q13098 491 aa6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 CPOQ8IVL8 374 aa6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 GSPT2Q8IYD1 628 aaKnown RBP6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 ANKRD35Q8N283 1001 aa6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 DNAJB14Q8TBM8 379 aa6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 CPT1CQ8TCG5 803 aa6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 TRAPPC9Q96Q05 1148 aa6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 UBN1Q9NPG3 1134 aa6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 DNAJB11Q9UBS4 358 aa6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 NDRG4Q9ULP0 352 aaKnown RBP6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 USP15Q9Y4E8 981 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 SLC30A1Q9Y6M5 507 aa6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 RB1CC1Q8TDY2 1594 aa6.09□□□□□ -1.43
HMGB1P3-201ENST00000502802 A0A1B0GTW7 788 aa6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 LEFTY2O00292 366 aa6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 CD3EAPO15446 510 aaKnown RBP6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 HOXC11O43248 304 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 PRKCBP05771 671 aa6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 KLRK1P26718 216 aa6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 ELF1P32519 619 aa6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 RAP1GAPP47736 663 aa6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 ACTR2P61160 394 aa6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 E2F2Q14209 437 aa6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 C1QL3Q5VWW1 255 aa6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 NAIF1Q69YI7 327 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 SFRP4Q6FHJ7 346 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 ABLIM2Q6H8Q1 611 aa6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 RINT1Q6NUQ1 792 aa6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 FOXR2Q6PJQ5 311 aa6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 RAB11FIP2Q7L804 512 aa6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 TMPRSS9Q7Z410 1059 aa6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 FUKQ8N0W3 1084 aa6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 Q8N3U1 123 aa6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 OR56A1Q8NGH5 318 aa6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 ABHD5Q8WTS1 349 aa6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 ZDHHC12Q96GR4 267 aa6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 ZCWPW1Q9H0M4 648 aa6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 CXorf36Q9H7Y0 433 aa6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 GBA2Q9HCG7 927 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.08□□□□□ -1.44
HMGB1P3-201ENST00000502802 SPATA31A3Q5VYP0 1347 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 ITIH6Q6UXX5 1313 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 CCDC78A2IDD5 438 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 DIRC3C9JPN6 131 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 H0Y3Z8 333 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 J3KTA2 159 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 ZSCAN9O15535 394 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 GPANK1O95872 356 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 HLA-DOAP06340 250 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 FGFR4P22455 802 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 PPIFP30405 207 aaKnown RBP6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 RXRGP48443 463 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 ANXA11P50995 505 aaKnown RBP6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 RABGGTBP53611 331 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 HSD11B2P80365 405 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 MC2RQ01718 297 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 TRPC3Q13507 836 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 TRIM60Q495X7 471 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 ARHGAP40Q5TG30 622 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 FAAH2Q6GMR7 532 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 NFRKBQ6P4R8 1299 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 C1orf122Q6ZSJ8 110 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 CLNKQ7Z7G1 428 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 TTC30AQ86WT1 665 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 Q8NA96 180 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 WDR60Q8WVS4 1066 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 COG8Q96MW5 612 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 KCNC2Q96PR1 638 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 MNTQ99583 582 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 TWSG1Q9GZX9 223 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 RASSF1Q9NS23 344 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 SMC4Q9NTJ3 1288 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 VPS51Q9UID3 782 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 ZFR2Q9UPR6 939 aaKnown RBP6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 FER1L4A9Z1Z3 1794 aa6.07□□□□□ -1.44
HMGB1P3-201ENST00000502802 UNC13AQ9UPW8 1703 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 PNMA6EA0A0J9YXQ4 647 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 A6NLC8 198 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 SNX2O60749 519 aa6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 ERN1O75460 977 aaKnown RBP6.06□□□□□ -1.44
HMGB1P3-201ENST00000502802 CD4P01730 458 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms