RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 ACAP3Q96P50 834 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 C11orf70Q9BRQ4 267 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 ERP44Q9BS26 406 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 ADAM7Q9H2U9 754 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 RASAL2Q9UJF2 1139 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 CORO1CQ9ULV4 474 aaPredicted RBP12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 PASKQ96RG2 1323 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 KAT6AQ92794 2004 aa12.16□□□□□ -0.46
SNRNP200-208ENST00000497539 MGRN1O60291 552 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 HOXA11P31270 313 aaPredicted RBP12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 GBP2P32456 591 aaPredicted RBP12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 PSEN2P49810 448 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 PMS2P54278 862 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 TAF1CQ15572 869 aaPredicted RBP12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 ZBTB6Q15916 424 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 SLC27A1Q6PCB7 646 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 SYDE1Q6ZW31 735 aaPredicted RBP12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 RHOT1Q8IXI2 618 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 ZDHHC14Q8IZN3 488 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 WDTC1Q8N5D0 677 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 EPS8L3Q8TE67 593 aaKnown RBP12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 TFAP2BQ92481 460 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 C18orf8Q96DM3 657 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 CPB2Q96IY4 423 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 SNX27Q96L92 541 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 GORASP1Q9BQQ3 440 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 KATNAL1Q9BW62 490 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 TXLNGYQ9BZA5 131 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 SDCBP2Q9H190 292 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 MLXIPLQ9NP71 852 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 ABCF3Q9NUQ8 709 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 KIAA1257Q9ULG3 409 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 AGAP1Q9UPQ3 857 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 KPNA6O60684 536 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 NAT2P11245 290 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 DARSP14868 501 aaKnown RBP12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 FGFR4P22455 802 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 RBP5P82980 135 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 ALKAL1Q6UXT8 129 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 JAMLQ86YT9 394 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 CCDC63Q8NA47 563 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 EXD1Q8NHP7 514 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 FNIP1Q8TF40 1166 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 ZDHHC18Q9NUE0 388 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 POLIQ9UNA4 740 aa12.15□□□□□ -0.46
SNRNP200-208ENST00000497539 RGS16O15492 202 aaPredicted RBP12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 ZNF189O75820 626 aaPredicted RBP12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 GABRB2P47870 512 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 ZNF157P51786 506 aaPredicted RBP12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 MYO1EQ12965 1108 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 XKR4Q5GH76 650 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 DENND2CQ68D51 928 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 CPNE8Q86YQ8 564 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 SLC4A11Q8NBS3 891 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 ATXN2LQ8WWM7 1075 aaKnown RBP12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 BRD8Q9H0E9 1235 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 INTS9Q9NV88 658 aaKnown RBP12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 SETD4Q9NVD3 440 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 CNTN3Q9P232 1028 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 WDR35Q9P2L0 1181 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 TMEM221A6NGB7 291 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 FAM155AB1AL88 458 aaPredicted RBP12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 ITGB3P05106 788 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 COILP38432 576 aaPredicted RBP12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 SCNN1BP51168 640 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 INHBCP55103 352 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 KLF1Q13351 362 aaPredicted RBP12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 CCDC25Q86WR0 208 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 LRRC52Q8N7C0 313 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 RSRC1Q96IZ7 334 aaKnown RBP12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 ZNF668Q96K58 619 aaPredicted RBP12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 UPF3AQ9H1J1 476 aaKnown RBP12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 CASP8AP2Q9UKL3 1982 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 LIN7AO14910 233 aaPredicted RBP12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 DYNC1LI2O43237 492 aaPredicted RBP12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 DNAJC8O75937 253 aaPredicted RBP12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 SMNDC1O75940 238 aaKnown RBP eCLIP12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 HMGCRP04035 888 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 WEE2P0C1S8 567 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 RARAP10276 462 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 COPS2P61201 443 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 OSTNP61366 133 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 KCNJ2P63252 427 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 PIGHQ14442 188 aaPredicted RBP12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 MYBPC3Q14896 1274 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 TTC27Q6P3X3 843 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 NOTUMQ6P988 496 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 ZDHHC24Q6UX98 284 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 CDR2LQ86X02 465 aaPredicted RBP12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 ANKRD13BQ86YJ7 626 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 PASD1Q8IV76 773 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 ANKS4BQ8N8V4 417 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 PRCCQ92733 491 aaPredicted RBP12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 HHIPL1Q96JK4 782 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 PABPC3Q9H361 631 aaKnown RBP12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 CNOT10Q9H9A5 744 aaKnown RBP12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 ZFYVE28Q9HCC9 887 aa12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 PAPOLBQ9NRJ5 636 aaKnown RBP12.14□□□□□ -0.47
SNRNP200-208ENST00000497539 DPP3Q9NY33 737 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms