RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 PGBD4Q96DM1 585 aa14.38□□□□□ -0.11
SPTBN1-205ENST00000496323 HNRNPABQ99729 332 aaKnown RBP14.38□□□□□ -0.11
SPTBN1-205ENST00000496323 TRIM31Q9BZY9 425 aa14.38□□□□□ -0.11
SPTBN1-205ENST00000496323 DCLK3Q9C098 648 aa14.38□□□□□ -0.11
SPTBN1-205ENST00000496323 RAB6CQ9H0N0 254 aa14.38□□□□□ -0.11
SPTBN1-205ENST00000496323 DPH5Q9H2P9 285 aa14.38□□□□□ -0.11
SPTBN1-205ENST00000496323 C9IYK1 514 aa14.38□□□□□ -0.11
SPTBN1-205ENST00000496323 CDR1P51861 262 aa14.38□□□□□ -0.11
SPTBN1-205ENST00000496323 SLC6A3Q01959 620 aa14.38□□□□□ -0.11
SPTBN1-205ENST00000496323 SMTNL2Q2TAL5 461 aa14.38□□□□□ -0.11
SPTBN1-205ENST00000496323 TIGD5Q53EQ6 642 aa14.38□□□□□ -0.11
SPTBN1-205ENST00000496323 RBM41Q96IZ5 413 aaKnown RBP14.38□□□□□ -0.11
SPTBN1-205ENST00000496323 RAB17Q9H0T7 212 aa14.38□□□□□ -0.11
SPTBN1-205ENST00000496323 ZWILCHQ9H900 591 aa14.38□□□□□ -0.11
SPTBN1-205ENST00000496323 CRTAC1Q9NQ79 661 aa14.38□□□□□ -0.11
SPTBN1-205ENST00000496323 DDX43Q9NXZ2 648 aaKnown RBP14.38□□□□□ -0.11
SPTBN1-205ENST00000496323 INPP5FQ9Y2H2 1132 aa14.38□□□□□ -0.11
SPTBN1-205ENST00000496323 CLDN5O00501 218 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 MYCP01106 439 aaPredicted RBP14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 SKIP12755 728 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 PDGFRAP16234 1089 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 GPD1P21695 349 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 MIPP30301 263 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 SNX1Q13596 522 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 HLTFQ14527 1009 aaKnown RBP eCLIP14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 GPNMBQ14956 572 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 C15orf59Q2T9L4 293 aaPredicted RBP14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 KCNT1Q5JUK3 1230 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 SPOCD1Q6ZMY3 1216 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 CCDC105Q8IYK2 499 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 CLEC4CQ8WTT0 213 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 MAIP1Q8WWC4 291 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 SLCO2A1Q92959 643 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 CNPY3Q9BT09 278 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 UBN1Q9NPG3 1134 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 DDX56Q9NY93 547 aaKnown RBP14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 PTPN22Q9Y2R2 807 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 KBTBD13C9JR72 458 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 I3L4J1 428 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 INPPL1O15357 1258 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 PTPN7P35236 360 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 CDKN2BP42772 138 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 GRIK3Q13003 919 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 ACAP1Q15027 740 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 MTFR1Q15390 333 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 CCDC14Q49A88 953 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 PAN2Q504Q3 1202 aaKnown RBP14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 ZFYVE27Q5T4F4 411 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 DSTYKQ6XUX3 929 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 CYP4V2Q6ZWL3 525 aaPredicted RBP14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 TMEM86AQ8N2M4 240 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 PEBP4Q96S96 227 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 FAM118BQ9BPY3 351 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 PAK6Q9NQU5 681 aaPredicted RBP14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 FAM114A2Q9NRY5 505 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 ASNSD1Q9NWL6 643 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 PCSK1NQ9UHG2 260 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 SNX24Q9Y343 169 aa14.37□□□□□ -0.11
SPTBN1-205ENST00000496323 hCG_1818297A0A087WSY0 165 aa14.36□□□□□ -0.11
SPTBN1-205ENST00000496323 LRRD1A4D1F6 860 aa14.36□□□□□ -0.11
SPTBN1-205ENST00000496323 AGPSO00116 658 aa14.36□□□□□ -0.11
SPTBN1-205ENST00000496323 DNM1LO00429 736 aa14.36□□□□□ -0.11
SPTBN1-205ENST00000496323 BEST1O76090 585 aa14.36□□□□□ -0.11
SPTBN1-205ENST00000496323 B3GAT3O94766 335 aa14.36□□□□□ -0.11
SPTBN1-205ENST00000496323 KRT7P08729 469 aa14.36□□□□□ -0.11
SPTBN1-205ENST00000496323 PCK1P35558 622 aa14.36□□□□□ -0.11
SPTBN1-205ENST00000496323 DRG2P55039 364 aaKnown RBP14.36□□□□□ -0.11
SPTBN1-205ENST00000496323 COPS2P61201 443 aa14.36□□□□□ -0.11
SPTBN1-205ENST00000496323 FAM189BP81408 668 aa14.36□□□□□ -0.11
SPTBN1-205ENST00000496323 MDH1BQ5I0G3 518 aa14.36□□□□□ -0.11
SPTBN1-205ENST00000496323 KAZNQ674X7 775 aa14.36□□□□□ -0.11
SPTBN1-205ENST00000496323 SLC24A5Q71RS6 500 aa14.36□□□□□ -0.11
SPTBN1-205ENST00000496323 ZDHHC17Q8IUH5 632 aa14.36□□□□□ -0.11
SPTBN1-205ENST00000496323 FAM126BQ8IXS8 530 aa14.36□□□□□ -0.11
SPTBN1-205ENST00000496323 CFAP57Q96MR6 1250 aa14.36□□□□□ -0.11
SPTBN1-205ENST00000496323 RUNDC3BQ96NL0 473 aa14.36□□□□□ -0.11
SPTBN1-205ENST00000496323 RTP3Q9BQQ7 232 aa14.36□□□□□ -0.11
SPTBN1-205ENST00000496323 DUSP16Q9BY84 665 aa14.36□□□□□ -0.11
SPTBN1-205ENST00000496323 ZDHHC18Q9NUE0 388 aa14.36□□□□□ -0.11
SPTBN1-205ENST00000496323 GRHL1Q9NZI5 618 aa14.36□□□□□ -0.11
SPTBN1-205ENST00000496323 USP18Q9UMW8 372 aa14.36□□□□□ -0.11
SPTBN1-205ENST00000496323 F8W810 466 aa14.35□□□□□ -0.11
SPTBN1-205ENST00000496323 DPYSL4O14531 572 aa14.35□□□□□ -0.11
SPTBN1-205ENST00000496323 XPO1O14980 1071 aaKnown RBP14.35□□□□□ -0.11
SPTBN1-205ENST00000496323 B4GALT3O60512 393 aa14.35□□□□□ -0.11
SPTBN1-205ENST00000496323 TRUB2O95900 331 aaKnown RBP14.35□□□□□ -0.11
SPTBN1-205ENST00000496323 LCP1P13796 627 aa14.35□□□□□ -0.11
SPTBN1-205ENST00000496323 BRCC3P46736 316 aa14.35□□□□□ -0.11
SPTBN1-205ENST00000496323 RPL21P46778 160 aaKnown RBP14.35□□□□□ -0.11
SPTBN1-205ENST00000496323 LHX1P48742 406 aa14.35□□□□□ -0.11
SPTBN1-205ENST00000496323 TUSC3Q13454 348 aa14.35□□□□□ -0.11
SPTBN1-205ENST00000496323 CCNG2Q16589 344 aa14.35□□□□□ -0.11
SPTBN1-205ENST00000496323 HADHQ16836 314 aaKnown RBP14.35□□□□□ -0.11
SPTBN1-205ENST00000496323 CLLU1OSQ5K130 101 aa14.35□□□□□ -0.11
SPTBN1-205ENST00000496323 ZDHHC24Q6UX98 284 aa14.35□□□□□ -0.11
SPTBN1-205ENST00000496323 LRRC8DQ7L1W4 858 aa14.35□□□□□ -0.11
SPTBN1-205ENST00000496323 PIGZQ86VD9 579 aa14.35□□□□□ -0.11
SPTBN1-205ENST00000496323 MREGQ8N565 214 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms