RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 ZC3H18Q86VM9 953 aaKnown RBP11.74□□□□□ -0.53
CHMP3-209ENST00000494623 THOC1Q96FV9 657 aaKnown RBP11.74□□□□□ -0.53
CHMP3-209ENST00000494623 ACAP3Q96P50 834 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 SMC6Q96SB8 1091 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 PITPNM3Q9BZ71 974 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 CYP3A43Q9HB55 503 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 DPP3Q9NY33 737 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 GINS2Q9Y248 185 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 MGAMO43451 1857 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 HMGCRP04035 888 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 RBP3P10745 1247 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 PDGFRAP16234 1089 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 ADCYAP1R1P41586 468 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 GABRB2P47870 512 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 CDH6P55285 790 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 BASP1P80723 227 aaKnown RBP11.74□□□□□ -0.53
CHMP3-209ENST00000494623 RBP5P82980 135 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 NR1H3Q13133 447 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 XRCC4Q13426 336 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 BBS9Q3SYG4 887 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 C3orf62Q6ZUJ4 267 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 NAT8LQ8N9F0 302 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 SPATA18Q8TC71 538 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 RXFP2Q8WXD0 754 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 PEBP4Q96S96 227 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 CD248Q9HCU0 757 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 BARX2Q9UMQ3 279 aaPredicted RBP11.74□□□□□ -0.53
CHMP3-209ENST00000494623 SLC12A4Q9UP95 1085 aa11.74□□□□□ -0.53
CHMP3-209ENST00000494623 E5RJQ4 531 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 CYP3A5P20815 502 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 GPD1P21695 349 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 RPA3P35244 121 aaPredicted RBP11.73□□□□□ -0.53
CHMP3-209ENST00000494623 EFTUD2Q15029 972 aaKnown RBP eCLIP11.73□□□□□ -0.53
CHMP3-209ENST00000494623 TAZQ16635 292 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 SCYL2Q6P3W7 929 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 DARS2Q6PI48 645 aaKnown RBP11.73□□□□□ -0.53
CHMP3-209ENST00000494623 MTHFD1LQ6UB35 978 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 TBC1D1Q86TI0 1168 aaPredicted RBP11.73□□□□□ -0.53
CHMP3-209ENST00000494623 TDRPQ86YL5 185 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 CCDC125Q86Z20 511 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 PARP9Q8IXQ6 854 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 PALM2Q8IXS6 379 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 CCDC63Q8NA47 563 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 FBXO36Q8NEA4 188 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 KIF12Q96FN5 646 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 SGSM3Q96HU1 749 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 PIWIL1Q96J94 861 aaKnown RBP11.73□□□□□ -0.53
CHMP3-209ENST00000494623 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.73□□□□□ -0.53
CHMP3-209ENST00000494623 XPO7Q9UIA9 1087 aaKnown RBP11.73□□□□□ -0.53
CHMP3-209ENST00000494623 TSPAN16Q9UKR8 245 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 ARL2BPQ9Y2Y0 163 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 OTOFQ9HC10 1997 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 LRRC37A2A6NM11 1700 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 APOC4-APOC2K7ER74 178 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 NDC80O14777 642 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 MCF2LO15068 1137 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 APOC2P02655 101 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 CA4P22748 312 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 RDXP35241 583 aaKnown RBP11.73□□□□□ -0.53
CHMP3-209ENST00000494623 ZNF143P52747 638 aaPredicted RBP11.73□□□□□ -0.53
CHMP3-209ENST00000494623 ATP11AP98196 1134 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 POU5F1BQ06416 359 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 DPYSL3Q14195 570 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 CGB2Q6NT52 195 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 TRNP1Q6NT89 227 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 C1orf228Q6PIY5 440 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 FAM183BPQ6ZVS7 135 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 FRMD8P1Q9BZ68 369 aaPredicted RBP11.73□□□□□ -0.53
CHMP3-209ENST00000494623 CXCL16Q9H2A7 254 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 RABGEF1Q9UJ41 708 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 CLUHO75153 1309 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.73□□□□□ -0.53
CHMP3-209ENST00000494623 ASMTLO95671 621 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 GSTA1P08263 222 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 ADORA2AP29274 412 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 GJA5P36382 358 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 GTF2A1P52655 376 aaPredicted RBP11.73□□□□□ -0.53
CHMP3-209ENST00000494623 GEMIN4P57678 1058 aaKnown RBP11.73□□□□□ -0.53
CHMP3-209ENST00000494623 TMEM62Q0P6H9 643 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 MKRN3Q13064 507 aaKnown RBP11.73□□□□□ -0.53
CHMP3-209ENST00000494623 DNAJC3Q13217 504 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 MAMDC4Q6UXC1 1216 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 GPRC5AQ8NFJ5 357 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 FBF1Q8TES7 1133 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 SPOCK2Q92563 424 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 FAXDC2Q96IV6 333 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 NT5C1AQ9BXI3 368 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 VRTNQ9H8Y1 702 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 RSAD1Q9HA92 442 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 UBN1Q9NPG3 1134 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 RNF19AQ9NV58 838 aa11.73□□□□□ -0.53
CHMP3-209ENST00000494623 ANK1P16157 1881 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 H3BRB1 525 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 TSPAN1O60635 241 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 TMEM63AO94886 807 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 PHBP35232 272 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 GSCP56915 257 aaPredicted RBP11.72□□□□□ -0.53
CHMP3-209ENST00000494623 SPARCL1Q14515 664 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 ACAP1Q15027 740 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 MTFR1Q15390 333 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms