RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 CHRNA1P02708 482 aa5.9□□□□□ -1.46
PTCD3-219ENST00000494323 LGALS2P05162 132 aa5.9□□□□□ -1.46
PTCD3-219ENST00000494323 POLR2MP0CAP2 368 aa5.9□□□□□ -1.46
PTCD3-219ENST00000494323 CCND2P30279 289 aa5.9□□□□□ -1.46
PTCD3-219ENST00000494323 BMPR1AP36894 532 aa5.9□□□□□ -1.46
PTCD3-219ENST00000494323 MRPS9P82933 396 aaKnown RBP5.9□□□□□ -1.46
PTCD3-219ENST00000494323 HDAC1Q13547 482 aaPredicted RBP5.9□□□□□ -1.46
PTCD3-219ENST00000494323 SEC23AQ15436 765 aa5.9□□□□□ -1.46
PTCD3-219ENST00000494323 ZNF174Q15697 407 aa5.9□□□□□ -1.46
PTCD3-219ENST00000494323 IMMTQ16891 758 aaKnown RBP5.9□□□□□ -1.46
PTCD3-219ENST00000494323 FBLN7Q53RD9 439 aa5.9□□□□□ -1.46
PTCD3-219ENST00000494323 BTBD8Q5XKL5 378 aa5.9□□□□□ -1.46
PTCD3-219ENST00000494323 C11orf74Q86VG3 221 aa5.9□□□□□ -1.46
PTCD3-219ENST00000494323 TICAM2Q86XR7 235 aa5.9□□□□□ -1.46
PTCD3-219ENST00000494323 MIB1Q86YT6 1006 aa5.9□□□□□ -1.46
PTCD3-219ENST00000494323 C1QL4Q86Z23 238 aa5.9□□□□□ -1.46
PTCD3-219ENST00000494323 PABPC5Q96DU9 382 aaKnown RBP5.9□□□□□ -1.46
PTCD3-219ENST00000494323 YIPF4Q9BSR8 244 aa5.9□□□□□ -1.46
PTCD3-219ENST00000494323 KRT23Q9C075 422 aa5.9□□□□□ -1.46
PTCD3-219ENST00000494323 RNF38Q9H0F5 515 aa5.9□□□□□ -1.46
PTCD3-219ENST00000494323 ALG13Q9NP73 1137 aaKnown RBP5.9□□□□□ -1.46
PTCD3-219ENST00000494323 NGRNQ9NPE2 291 aaKnown RBP5.9□□□□□ -1.46
PTCD3-219ENST00000494323 KCNH7Q9NS40 1196 aa5.9□□□□□ -1.46
PTCD3-219ENST00000494323 DIAPH3Q9NSV4 1193 aa5.9□□□□□ -1.46
PTCD3-219ENST00000494323 OXSMQ9NWU1 459 aa5.9□□□□□ -1.46
PTCD3-219ENST00000494323 MAP3K20Q9NYL2 800 aaKnown RBP5.9□□□□□ -1.46
PTCD3-219ENST00000494323 B3GALT1Q9Y5Z6 326 aa5.9□□□□□ -1.46
PTCD3-219ENST00000494323 HCFC2Q9Y5Z7 792 aa5.9□□□□□ -1.46
PTCD3-219ENST00000494323 C5orf42Q9H799 3197 aa5.9□□□□□ -1.47
PTCD3-219ENST00000494323 TRIOO75962 3097 aa5.9□□□□□ -1.47
PTCD3-219ENST00000494323 PTPRZ1P23471 2315 aaPredicted RBP5.9□□□□□ -1.47
PTCD3-219ENST00000494323 SCDO00767 359 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 KCNK3O14649 394 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 IFIT3O14879 490 aaKnown RBP5.89□□□□□ -1.47
PTCD3-219ENST00000494323 LINC01565O15544 149 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 TGM5O43548 720 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 AKAP10O43572 662 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 TSPAN6O43657 245 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 CYTH3O43739 400 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 KRT37O76014 449 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 GHRP10912 638 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 PTPN1P18031 435 aaKnown RBP5.89□□□□□ -1.47
PTCD3-219ENST00000494323 HOXC8P31273 242 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 CTNNB1P35222 781 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 MRE11P49959 708 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 KPNA1P52294 538 aaPredicted RBP5.89□□□□□ -1.47
PTCD3-219ENST00000494323 RRP1P56182 461 aaKnown RBP5.89□□□□□ -1.47
PTCD3-219ENST00000494323 SRSF3P84103 164 aaKnown RBP5.89□□□□□ -1.47
PTCD3-219ENST00000494323 ITKQ08881 620 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 HYAL1Q12794 435 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 NEDD9Q14511 834 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 TARBP2Q15633 366 aaKnown RBP5.89□□□□□ -1.47
PTCD3-219ENST00000494323 INAVAQ3KP66 663 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 ATP13A4Q4VNC1 1196 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 USP17L6PQ6QN14 398 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 ETV3LQ6ZN32 361 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 RPAINQ86UA6 219 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 CHD1LQ86WJ1 897 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 PASD1Q8IV76 773 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 RBM12BQ8IXT5 1001 aaKnown RBP5.89□□□□□ -1.47
PTCD3-219ENST00000494323 EFHBQ8N7U6 833 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 CPA5Q8WXQ8 436 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 DLG3Q92796 817 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 ZBTB10Q96DT7 871 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 SAMD11Q96NU1 681 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 GPR20Q99678 358 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 MENTQ9BUN1 341 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 IL25Q9H293 177 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 RWDD1Q9H446 243 aaPredicted RBP5.89□□□□□ -1.47
PTCD3-219ENST00000494323 PCIF1Q9H4Z3 704 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 RIOX1Q9H6W3 641 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 RIC8BQ9NVN3 520 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 SIRT5Q9NXA8 310 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 DTLQ9NZJ0 730 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 MYO10Q9HD67 2058 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 TECTAO75443 2155 aa5.89□□□□□ -1.47
PTCD3-219ENST00000494323 NLRC5Q86WI3 1866 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 TTC3P53804 2025 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 TEX51A0A1B0GUA7 166 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 DVL2O14641 736 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 BUB1BO60566 1050 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-219ENST00000494323 ATP9AO75110 1047 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 SEMA7AO75326 666 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 SCGB1D2O95969 90 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 LTFP02788 710 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 LINC00271P0C7V0 271 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 ZSCAN22P10073 491 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-219ENST00000494323 NCAM1P13591 858 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 MARK3P27448 753 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 ICAM3P32942 547 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 RAB27AP51159 221 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 ADAM17P78536 824 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 NHLH1Q02575 133 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 GHRHRQ02643 423 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 ADAM15Q13444 863 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 CAMK1Q14012 370 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 BTG3Q14201 252 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-219ENST00000494323 LPIN1Q14693 890 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 GRM4Q14833 912 aa5.88□□□□□ -1.47
PTCD3-219ENST00000494323 PAN2Q504Q3 1202 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms